UHGV-0153081 (vOTU-027571)

Viral Genome: UHGV-0153081

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0153081
vOTU ID	vOTU-027571
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_480514
Associated Biosample	SAMN06115454
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	77.82 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	14
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9776
Viral Hallmark Genes (geNomad)	5
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	51.92
Jumbo Phage?	No

Genome Content
Length (bps)	29,238
GC Content	51.46%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	38
CDS Density	96%
Average CDS Length (bps)	734.76
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 77.82)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0153081_2	phrog_7338	40.3	0.000000000044	N/A	unknown function
UniRef90	UHGV-0153081_2	UniRef90_UPI000561DC32	101.0	2.17e-26	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0153081_2	574376.BAMA_15580	49.7	0.000000962	Helix-turn-helix domain	N/A
Pfam	UHGV-0153081_2	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-0153081_2	PF09035,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0153081_3	phrog_14367	50.1	0.000000000000021	N/A	unknown function
UniRef90	UHGV-0153081_3	UniRef90_E4L8C9	88.2	7.02e-21	LysM domain-containing protein	N/A
eggNOG-mapper	UHGV-0153081_3	568816.Acin_1857	48.5	0.00000538	LysM domain	N/A
Pfam	UHGV-0153081_3	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0153081_3	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0153081_3	MF_02014,NF010723,COG1388	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0153081_8	910314.HMPREF9220_0635	51.6	0.000000472	Siphovirus Gp157	N/A
KOfam	UHGV-0153081_9	K03546	69.3	5.2e-20	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-0153081_9	phrog_1499	468.3	0	N/A	unknown function
UniRef90	UHGV-0153081_9	UniRef90_A0A8E3ZJD7	568.0	0	AAA_23 domain-containing protein	N/A
eggNOG-mapper	UHGV-0153081_9	1123511.KB905868_gene202	490.0	0	AAA domain	N/A
Pfam	UHGV-0153081_9	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0153081_9	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0153081_9	PF11398,MF_00365,TIGR00634,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-0153081_10	phrog_124	205.5	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0153081_10	UniRef90_A0A3A8U6N7	317.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0153081_10	910314.HMPREF9220_0634	332.0	0	AAA domain	N/A
Pfam	UHGV-0153081_10	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0153081_10	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0153081_11	phrog_2698	164.7	0	N/A	unknown function
UniRef90	UHGV-0153081_11	UniRef90_A0A5F0K1Y3	126.0	3.13e-34	N/A	N/A
eggNOG-mapper	UHGV-0153081_11	910314.HMPREF9220_0633	125.0	1.3e-34	N/A	N/A
structural_annotation	UHGV-0153081_11	PF05037	N/A	N/A	N/A	N/A
KOfam	UHGV-0153081_12	K17677	352.5	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-0153081_12	phrog_16	266.9	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0153081_12	UniRef90_A0A8D5A5D7	877.0	0	Putative DEAD box family helicase, phage associated	N/A
eggNOG-mapper	UHGV-0153081_12	1000588.HMPREF9965_1718	707.0	0	DEAD-like helicases superfamily	N/A
PADLOC	UHGV-0153081_12	mREase_IV_00005	138.1	7.69999e-41	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0153081_12	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0153081_12	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0153081_12	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0153081_12	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
KOfam	UHGV-0153081_13	K07505	378.1	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-0153081_13	phrog_2597	919.3	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0153081_13	UniRef90_A0A8D5A566	1083.0	0	PriCT_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0153081_13	910314.HMPREF9220_0631	780.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-0153081_13	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-0153081_13	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-0153081_13	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-0153081_13	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-0153081_14	K01160	49.9	0.000000000000099	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0153081_14	phrog_140	82.8	5.3e-24	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0153081_14	UniRef90_E4LA60	127.0	5.08e-35	Crossover junction endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0153081_14	910314.HMPREF9220_0627	127.0	8.52e-36	crossover junction endodeoxyribonuclease	N/A
Pfam	UHGV-0153081_14	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0153081_14	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0153081_14	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0153081_15	phrog_16126	53.5	0.0000000000000037	N/A	unknown function
UniRef90	UHGV-0153081_16	UniRef90_A0A3B9DVA1	250.0	0	MYND-type domain-containing protein	N/A
PHROG	UHGV-0153081_17	phrog_36	43.9	0.0000000000044	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0153081_17	679201.HMPREF9334_00314	53.1	0.000000761	N/A	N/A
structural_annotation	UHGV-0153081_17	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0153081_20	phrog_144	48.9	0.00000000000014	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0153081_20	UniRef90_UPI0008D9916E	109.0	9.15e-28	N/A	N/A
PHROG	UHGV-0153081_21	phrog_9	161.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0153081_21	UniRef90_UPI0008D9BB34	827.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0153081_21	742743.HMPREF9453_00567	897.0	0	large subunit	N/A
Pfam	UHGV-0153081_21	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0153081_21	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0153081_21	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0153081_21	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
UniRef90	UHGV-0153081_22	UniRef90_UPI00094F3068	99.8	2.53e-25	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0153081_22	469617.FUAG_00838	48.1	0.00000676	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0153081_22	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0153081_22	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0153081_22	PF05135,TIGR01560	N/A	N/A	N/A	N/A
KOfam	UHGV-0153081_23	K01358	68.5	1.4e-19	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0153081_23	phrog_94	109.8	4.1e-32	head maturation protease	head and packaging
UniRef90	UHGV-0153081_23	UniRef90_UPI000FF6F232	270.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0153081_23	742743.HMPREF9453_00565	131.0	1.97e-35	serine-type endopeptidase activity	N/A
Pfam	UHGV-0153081_23	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0153081_23	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0153081_23	PF00574,MF_00444,NF011089,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0153081_24	phrog_12	186.6	0	portal protein	head and packaging
UniRef90	UHGV-0153081_24	UniRef90_UPI00094F25F3	469.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0153081_24	742743.HMPREF9453_00564	456.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0153081_24	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0153081_24	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0153081_24	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0153081_24	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
Pfam	UHGV-0153081_25	PF11836	N/A	N/A	Phage tail tube protein, GTA-gp10	Phage_TAC_11
structural_annotation	UHGV-0153081_25	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0153081_27	phrog_10	134.6	1.1e-39	major head protein	head and packaging
UniRef90	UHGV-0153081_27	UniRef90_H1CYX3	382.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-0153081_27	742743.HMPREF9453_00561	382.0	0	Phage capsid family	N/A
Pfam	UHGV-0153081_27	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0153081_27	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0153081_27	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0153081_27	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0153081_28	UniRef90_UPI00034E17BA	148.0	6.16571e-44	head-tail adaptor protein	N/A
Pfam	UHGV-0153081_28	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-0153081_28	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0153081_29	PF16807	N/A	N/A	N/A	N/A
PHROG	UHGV-0153081_30	phrog_1407	63.5	3.2e-18	major tail protein	tail
UniRef90	UHGV-0153081_30	UniRef90_UPI00034E16F7	170.0	0	phage tail tube protein	N/A
eggNOG-mapper	UHGV-0153081_30	1000569.HMPREF1040_0191	61.2	0.000000002	Phage tail tube protein	N/A
Pfam	UHGV-0153081_30	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
COG	UHGV-0153081_30	COG5437	N/A	N/A	Phage tail protein, TP901-1 family	N/A
structural_annotation	UHGV-0153081_30	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0153081_32	phrog_13338	49.8	0.000000000000035	N/A	unknown function
UniRef90	UHGV-0153081_32	UniRef90_H1CYW8	201.0	0	Tape measure domain-containing protein	N/A
eggNOG-mapper	UHGV-0153081_32	742743.HMPREF9453_00556	201.0	0	tape measure	N/A
COG	UHGV-0153081_32	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0153081_32	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0153081_33	phrog_2913	73.2	2.6e-21	glycoside hydrolase	other
UniRef90	UHGV-0153081_33	UniRef90_UPI000C7C1E73	120.0	3.83e-31	N/A	N/A
eggNOG-mapper	UHGV-0153081_33	592028.GCWU000321_01387	126.0	3.79e-34	N/A	N/A
Pfam	UHGV-0153081_33	PF09343	N/A	N/A	N/A	DUF2460
COG	UHGV-0153081_33	COG5448	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0153081_33	PF09343,TIGR02217,COG5448	N/A	N/A	N/A	N/A
PHROG	UHGV-0153081_34	phrog_778	54.7	0.0000000000000015	tail assembly protein	tail
UniRef90	UHGV-0153081_34	UniRef90_A0A3B9DWJ4	361.0	0	N/A	N/A
eggNOG-mapper	UHGV-0153081_34	742743.HMPREF9453_00554	291.0	0	N/A	N/A
Pfam	UHGV-0153081_34	PF09931	N/A	N/A	N/A	DUF2163
COG	UHGV-0153081_34	COG5449	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0153081_34	PF09931,TIGR01600,COG4672	N/A	N/A	N/A	N/A
KOfam	UHGV-0153081_35	K13695	65.5	1e-18	nlpC; probable lipoprotein NlpC	N/A
PHROG	UHGV-0153081_35	phrog_329	60.0	3e-17	minor tail protein	tail
UniRef90	UHGV-0153081_35	UniRef90_A0A3B9DUZ7	306.0	0	Hydrolase	N/A
eggNOG-mapper	UHGV-0153081_35	742743.HMPREF9453_00553	266.0	0	cysteine-type peptidase activity	N/A
Pfam	UHGV-0153081_35	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-0153081_35	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0153081_35	PF00877,TIGR02219,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-0153081_36	phrog_1101	359.8	0	tail protein	tail
UniRef90	UHGV-0153081_36	UniRef90_A0A3B9DV75	1788.0	0	Phage-tail_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0153081_36	742743.HMPREF9453_00552	1498.0	0	Putative phage tail protein	N/A
Pfam	UHGV-0153081_36	PF13550	N/A	N/A	Putative phage tail protein	Phage-tail_3
COG	UHGV-0153081_36	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0153081_36	PF13550,NF040662,COG4733	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0153081_37	742743.HMPREF9453_00547	79.0	0.000000000000128	tail collar domain protein	N/A
COG	UHGV-0153081_37	COG4675	N/A	N/A	Phage tail collar domain	N/A
KOfam	UHGV-0153081_38	K14059	102.6	7.5e-30	int; integrase	N/A
PHROG	UHGV-0153081_38	phrog_1	132.0	7e-39	integrase	integration and excision
UniRef90	UHGV-0153081_38	UniRef90_H1CYW2	390.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0153081_38	742743.HMPREF9453_00550	390.0	0	Phage integrase family	N/A
Pfam	UHGV-0153081_38	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0153081_38	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0153081_38	PF00589,MF_01808,TIGR02224,COG4973	N/A	N/A	N/A	N/A