UHGV-0154509 (vOTU-121668)

Viral Genome: UHGV-0154509

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0154509
vOTU ID	vOTU-121668
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_474842
Associated Biosample	SAMN06115516
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	58.18 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	7
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9572
Viral Hallmark Genes (geNomad)	3
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	10.24
Jumbo Phage?	No

Genome Content
Length (bps)	19,918
GC Content	57.06%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	33
CDS Density	92%
Average CDS Length (bps)	553.46
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 58.18)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0154509_1	K14059	137.0	2.4e-40	int; integrase	N/A
PHROG	UHGV-0154509_1	phrog_1	147.1	1.49939e-43	integrase	integration and excision
UniRef90	UHGV-0154509_1	UniRef90_A0A1G0ZFB6	94.7	2.29e-18	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0154509_1	313628.LNTAR_10266	84.0	0.00000000000000589	DNA integration	N/A
Pfam	UHGV-0154509_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0154509_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
KOfam	UHGV-0154509_12	K07741	76.2	9.9e-22	antB; anti-repressor protein	N/A
PHROG	UHGV-0154509_12	phrog_130	218.6	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0154509_12	UniRef90_UPI0011067F2A	193.0	0	phage antirepressor	N/A
eggNOG-mapper	UHGV-0154509_12	1392501.JIAC01000001_gene1517	181.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0154509_12	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0154509_12	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0154509_12	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0154509_12	PF03374,PF02498,TIGR02681,COG3617,COG3645	N/A	N/A	N/A	N/A
PHROG	UHGV-0154509_15	phrog_5810	57.8	2.2e-16	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0154509_15	402626.Rpic_2326	95.1	3.67e-20	ROK family	N/A
COG	UHGV-0154509_15	COG3355	N/A	N/A	Predicted transcriptional regulator	N/A
structural_annotation	UHGV-0154509_15	PF01475,NF006999,COG0735	N/A	N/A	N/A	N/A
PHROG	UHGV-0154509_18	phrog_874	169.0	0	N/A	unknown function
UniRef90	UHGV-0154509_18	UniRef90_UPI001D07DB93	134.0	5.23e-36	morphogenetic protein	N/A
eggNOG-mapper	UHGV-0154509_18	701347.Entcl_1845	133.0	1.08e-36	N/A	N/A
structural_annotation	UHGV-0154509_18	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-0154509_19	phrog_954	250.7	0	DNA methyltransferase	other
UniRef90	UHGV-0154509_19	UniRef90_V6IVD4	238.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0154509_19	1395513.P343_12775	238.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
PADLOC	UHGV-0154509_19	MTase_II_00074	237.5	0	Type II methyltransferase	RM
Pfam	UHGV-0154509_19	PF13649	N/A	N/A	Methyltransferase domain	Methyltransf_25
Pfam	UHGV-0154509_19	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-0154509_19	COG0500	N/A	N/A	SAM-dependent methyltransferase	N/A
structural_annotation	UHGV-0154509_19	PF01170,MF_01057,TIGR00446,COG4123	N/A	N/A	N/A	N/A
PHROG	UHGV-0154509_20	phrog_19515	61.1	2.4e-17	N/A	unknown function
eggNOG-mapper	UHGV-0154509_20	365044.Pnap_2280	74.7	4.78e-16	N/A	N/A
KOfam	UHGV-0154509_24	K21512	86.8	1.1e-25	gpA; terminase, large subunit [EC:3.1.21.4]	N/A
PHROG	UHGV-0154509_24	phrog_15	134.2	9.79999e-40	terminase large subunit	head and packaging
UniRef90	UHGV-0154509_24	UniRef90_A0A897YXK5	375.0	0	Phage terminase large subunit family protein	N/A
eggNOG-mapper	UHGV-0154509_24	1094496.m07a_08080	75.9	0.0000000000198	Phage terminase large subunit (GpA)	N/A
Pfam	UHGV-0154509_24	PF05876	N/A	N/A	Phage terminase large subunit gpA, ATPase domain	GpA_ATPase
Pfam	UHGV-0154509_24	PF20454	N/A	N/A	Terminase large subunit gpA, endonuclease domain	GpA_nuclease
COG	UHGV-0154509_24	COG5525	N/A	N/A	Phage terminase, large subunit GpA	N/A
PHROG	UHGV-0154509_25	phrog_5774	69.2	5.5e-20	head-tail joining	connector
eggNOG-mapper	UHGV-0154509_25	160492.XF_0712	52.8	0.0000026	N/A	N/A
PHROG	UHGV-0154509_26	phrog_21	206.2	0	portal protein	head and packaging
UniRef90	UHGV-0154509_26	UniRef90_A0A354UBL5	368.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0154509_26	1266908.AQPB01000051_gene2465	187.0	0	Phage portal protein, lambda family	N/A
Pfam	UHGV-0154509_26	PF05136	N/A	N/A	Phage portal protein, lambda family	Phage_portal_2
NCBIFam	UHGV-0154509_26	TIGR01539.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0154509_26	COG5511	N/A	N/A	Phage capsid protein	N/A
structural_annotation	UHGV-0154509_26	PF05136,MF_04135,TIGR01539,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0154509_27	K06904	41.1	0.000000000022	N/A	N/A
PHROG	UHGV-0154509_27	phrog_617	336.0	0	major head protein	head and packaging
UniRef90	UHGV-0154509_27	UniRef90_A0A354UAC1	428.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0154509_27	225937.HP15_670	220.0	0	Phage capsid family	N/A
Pfam	UHGV-0154509_27	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0154509_27	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0154509_27	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0154509_27	PF05065,PF04586,MF_04119,TIGR01554,TIGR01543,COG4653,COG3740	N/A	N/A	N/A	N/A
KOfam	UHGV-0154509_32	K01174	104.8	1e-30	nuc; micrococcal nuclease [EC:3.1.31.1]	N/A
PHROG	UHGV-0154509_32	phrog_8809	70.9	5.2e-21	N/A	unknown function
UniRef90	UHGV-0154509_32	UniRef90_A0A2S0L067	188.0	0	TNase-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0154509_32	1396418.BATQ01000176_gene2708	95.9	1.04e-22	Staphylococcal nuclease homologues	N/A
Pfam	UHGV-0154509_32	PF00565	N/A	N/A	Staphylococcal nuclease homologue	SNase
COG	UHGV-0154509_32	COG1525	N/A	N/A	Endonuclease YncB, thermonuclease family	N/A
structural_annotation	UHGV-0154509_32	PF00565,MF_00075,NF005083,COG1525	N/A	N/A	N/A	N/A
Pfam	UHGV-0154509_33	PF13717	N/A	N/A	zinc-ribbon domain	zinc_ribbon_4