UHGV-0158470 (vOTU-163057)

Viral Genome: UHGV-0158470

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0158470
vOTU ID	vOTU-163057
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_451238
Associated Biosample	SAMN05971659
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	56.44 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	13
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9822
Viral Hallmark Genes (geNomad)	7
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	38.3
Jumbo Phage?	No

Genome Content
Length (bps)	23,661
GC Content	54.23%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	33
CDS Density	92%
Average CDS Length (bps)	662.64
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 56.44)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0158470_2	K06909	387.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0158470_2	phrog_3717	149.1	1.82169e-44	terminase large subunit	head and packaging
UniRef90	UHGV-0158470_2	UniRef90_A0A6L8SYJ6	648.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0158470_2	33035.JPJF01000106_gene3136	477.0	0	Terminase small subunit	N/A
Pfam	UHGV-0158470_2	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0158470_2	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0158470_2	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0158470_2	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0158470_2	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0158470_3	phrog_533	400.1	0	portal protein	head and packaging
UniRef90	UHGV-0158470_3	UniRef90_A0A2U1BEK0	595.0	0	A118 family predicted phage portal protein	N/A
eggNOG-mapper	UHGV-0158470_3	1226322.HMPREF1545_00044	544.0	0	N/A	N/A
Pfam	UHGV-0158470_3	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0158470_3	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0158470_4	phrog_581	254.1	0	minor head protein	head and packaging
UniRef90	UHGV-0158470_4	UniRef90_A0A2U1BEM4	341.0	0	Minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0158470_4	903814.ELI_3213	252.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0158470_4	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0158470_4	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0158470_4	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0158470_5	phrog_2303	56.6	4.1e-16	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0158470_5	1226322.HMPREF1545_00049	120.0	3.63e-32	N/A	N/A
PHROG	UHGV-0158470_6	phrog_10	179.7	0	major head protein	head and packaging
UniRef90	UHGV-0158470_6	UniRef90_A0A2U1BEF2	525.0	0	HK97 family phage major capsid protein	N/A
eggNOG-mapper	UHGV-0158470_6	1226322.HMPREF1545_00050	465.0	0	Phage capsid family	N/A
Pfam	UHGV-0158470_6	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0158470_6	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0158470_6	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0158470_6	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0158470_7	phrog_541	113.0	1.7e-33	head-tail adaptor	connector
eggNOG-mapper	UHGV-0158470_7	642492.Clole_0822	60.8	0.000000000476	N/A	N/A
PHROG	UHGV-0158470_8	phrog_3366	102.6	3.2e-30	N/A	unknown function
eggNOG-mapper	UHGV-0158470_8	1226322.HMPREF1545_00053	120.0	3.89e-33	N/A	N/A
Pfam	UHGV-0158470_8	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0158470_8	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0158470_9	phrog_556	56.5	4.4e-16	minor head protein	head and packaging
UniRef90	UHGV-0158470_9	UniRef90_UPI00164EC49A	70.1	0.00000000000206	minor capsid protein	N/A
eggNOG-mapper	UHGV-0158470_9	33035.JPJF01000106_gene3128	92.8	5.91e-22	N/A	N/A
Pfam	UHGV-0158470_9	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0158470_9	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0158470_10	phrog_3266	50.2	0.000000000000037	tail completion	connector
eggNOG-mapper	UHGV-0158470_10	1232443.BAIA02000078_gene24	124.0	1.46e-34	N/A	N/A
structural_annotation	UHGV-0158470_10	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0158470_11	phrog_3099	84.9	1.1e-24	N/A	unknown function
eggNOG-mapper	UHGV-0158470_11	1235797.C816_04186	218.0	0	N/A	N/A
structural_annotation	UHGV-0158470_11	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0158470_12	phrog_11299	49.6	0.00000000000008	N/A	unknown function
eggNOG-mapper	UHGV-0158470_12	693746.OBV_18160	145.0	5.60519e-43	N/A	N/A
structural_annotation	UHGV-0158470_12	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0158470_13	phrog_706	115.9	3.4e-34	N/A	unknown function
UniRef90	UHGV-0158470_13	UniRef90_A0A2U1BEN4	199.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0158470_13	693746.OBV_18170	179.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0158470_13	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0158470_13	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0158470_14	phrog_1535	100.3	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0158470_14	1415775.U729_2614	79.3	0.00000000000289	phage tail tape measure protein	N/A
COG	UHGV-0158470_14	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0158470_15	phrog_1194	62.3	8.5e-18	N/A	unknown function
structural_annotation	UHGV-0158470_15	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0158470_16	phrog_6616	40.5	0.000000000015	tail protein	tail
UniRef90	UHGV-0158470_16	UniRef90_A0A2Z4QA17	100.0	6.41e-22	KID repeat-containing protein	N/A
eggNOG-mapper	UHGV-0158470_16	1235797.C816_04180	100.0	5.5e-23	N/A	N/A
structural_annotation	UHGV-0158470_16	PF21683,TIGR02126,COG4379	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0158470_17	1235797.C816_04179	80.9	0.0000000000000961	Chaperone of endosialidase	N/A
structural_annotation	UHGV-0158470_17	NF041249,COG4379	N/A	N/A	N/A	N/A
UniRef90	UHGV-0158470_18	UniRef90_A0A8D9PDX6	67.4	0.000000000000922	Zinc-finger double domain protein	N/A
structural_annotation	UHGV-0158470_18	PF07238	N/A	N/A	N/A	N/A
PHROG	UHGV-0158470_20	phrog_59	140.3	7.40026e-42	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0158470_20	UniRef90_UPI001E36D85A	162.0	0	NUMOD4 motif-containing HNH endonuclease	N/A
eggNOG-mapper	UHGV-0158470_20	1206110.L0P6F5_9CAUD	145.0	3.36003e-41	sequence-specific DNA binding transcription factor activity	N/A
PADLOC	UHGV-0158470_20	HEase_00016	101.3	2.1e-30	homing endonuclease	RM
Pfam	UHGV-0158470_20	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0158470_20	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0158470_20	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
KOfam	UHGV-0158470_23	K07273	133.8	2e-39	acm; lysozyme	N/A
PHROG	UHGV-0158470_23	phrog_291	115.2	8e-34	endolysin	lysis
UniRef90	UHGV-0158470_23	UniRef90_A0A3D2G0D9	457.0	0	Cpl-7 domain-containing protein	N/A
eggNOG-mapper	UHGV-0158470_23	877415.JNJQ01000013_gene314	165.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0158470_23	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0158470_23	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-0158470_23	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0158470_23	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0158470_24	phrog_37604	80.2	2e-23	N/A	unknown function
eggNOG-mapper	UHGV-0158470_24	585501.HMPREF6123_0817	74.3	0.00000000000000542	N/A	N/A
PHROG	UHGV-0158470_25	phrog_608	64.4	2e-18	holin	lysis
UniRef90	UHGV-0158470_25	UniRef90_UPI0019604BA7	79.0	9.04e-17	phage holin, LLH family	N/A
eggNOG-mapper	UHGV-0158470_25	1121472.AQWN01000009_gene420	60.5	0.000000000252	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0158470_25	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0158470_25	PF09682,TIGR01673	N/A	N/A	N/A	N/A
UniRef90	UHGV-0158470_26	UniRef90_A0A8D9PDT6	69.3	0.000000000000118	Transcriptional regulatory protein	N/A
eggNOG-mapper	UHGV-0158470_27	445972.ANACOL_01878	62.4	0.000000000134	N/A	N/A
PHROG	UHGV-0158470_29	phrog_16490	137.7	1.79997e-41	N/A	unknown function
eggNOG-mapper	UHGV-0158470_29	1408437.JNJN01000043_gene803	182.0	0	N/A	N/A
eggNOG-mapper	UHGV-0158470_30	1408437.JNJN01000043_gene802	159.0	0	N/A	N/A
eggNOG-mapper	UHGV-0158470_31	1378168.N510_03079	101.0	1.33e-23	N/A	N/A
KOfam	UHGV-0158470_33	K00847	295.2	0	E2.7.1.4, scrK; fructokinase [EC:2.7.1.4]	N/A
PHROG	UHGV-0158470_33	phrog_15334	118.2	7.7e-35	N/A	unknown function
UniRef90	UHGV-0158470_33	UniRef90_A0A3D2FY07	617.0	0	Carbohydrate kinase	N/A
eggNOG-mapper	UHGV-0158470_33	1378168.N510_02920	371.0	0	Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP)	N/A
Pfam	UHGV-0158470_33	PF00294	N/A	N/A	pfkB family carbohydrate kinase	PfkB
COG	UHGV-0158470_33	COG0524	N/A	N/A	Sugar or nucleoside kinase, ribokinase family	N/A