UHGV-0173825 (vOTU-010904)

Viral Genome: UHGV-0173825

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0173825
vOTU ID	vOTU-010904
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_588191
Associated Biosample	SAMN09781730
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	97.27 (High-quality)
Trimmed?	No
CheckV Viral Markers	19
CheckV Host Markers	0
Recoded?	Yes

Viral Content
geNomad score	0.9725
Viral Hallmark Genes (geNomad)	10
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	26.57
Jumbo Phage?	No

Genome Content
Length (bps)	21,858
GC Content	42.92%
Genetic Code	Blepharisma Nuclear Code (15)
CDS Genes	28
CDS Density	91%
Average CDS Length (bps)	707.46
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 97.27)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0173825_3	K03733	168.1	0	xerC; integrase/recombinase XerC	N/A
PHROG	UHGV-0173825_3	phrog_1	148.3	7.00649e-44	integrase	integration and excision
UniRef90	UHGV-0173825_3	UniRef90_UPI00195EC829	308.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0173825_3	1280671.AUJH01000014_gene725	243.0	0	Phage integrase SAM-like domain	N/A
Pfam	UHGV-0173825_3	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
Pfam	UHGV-0173825_3	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0173825_3	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0173825_3	PF00589,PF13495,MF_01808,TIGR02224,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-0173825_4	phrog_2429	47.5	0.00000000000028	involved in bacteriocin production or immunity	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0173825_4	UniRef90_UPI000BFC010A	57.0	0.00000000377	BhlA/UviB family holin-like peptide	N/A
eggNOG-mapper	UHGV-0173825_4	485916.Dtox_1854	47.4	0.00000437	BhlA holin family	N/A
Pfam	UHGV-0173825_4	PF10960	N/A	N/A	BhlA holin family	Holin_BhlA
PHROG	UHGV-0173825_6	phrog_372	105.1	8.5e-31	tail protein	tail
COG	UHGV-0173825_7	COG0845	N/A	N/A	Multidrug efflux pump subunit AcrA (membrane-fusion protein)	N/A
structural_annotation	UHGV-0173825_7	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0173825_8	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0173825_9	phrog_3981	263.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0173825_9	UniRef90_A0A7Z8ZUZ5	220.0	0	Phage, tape measure protein	N/A
eggNOG-mapper	UHGV-0173825_9	573061.Clocel_3967	270.0	0	tape measure	N/A
COG	UHGV-0173825_9	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0173825_9	MF_04138	N/A	N/A	N/A	N/A
PHROG	UHGV-0173825_10	phrog_2066	76.8	2.6e-22	N/A	unknown function
eggNOG-mapper	UHGV-0173825_10	702450.CUW_0542	68.6	0.00000000000386	N/A	N/A
UniRef90	UHGV-0173825_11	UniRef90_A0A0Z7ZZR4	86.7	1.25e-19	N/A	N/A
eggNOG-mapper	UHGV-0173825_11	1123304.AQYA01000037_gene231	92.0	1.69e-22	N/A	N/A
Pfam	UHGV-0173825_11	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-0173825_11	PF19591,TIGR01674	N/A	N/A	N/A	N/A
PHROG	UHGV-0173825_12	phrog_158	54.6	0.0000000000000024	major tail protein	tail
UniRef90	UHGV-0173825_12	UniRef90_UPI0005906553	99.0	5.02e-24	tail protein	N/A
eggNOG-mapper	UHGV-0173825_12	1499683.CCFF01000017_gene2926	99.0	8.42e-25	Phage tail tube protein, TTP	N/A
Pfam	UHGV-0173825_12	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-0173825_12	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0173825_13	1329516.JPST01000016_gene402	49.7	0.00000545	N/A	N/A
structural_annotation	UHGV-0173825_13	PF09646,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0173825_14	phrog_5	86.7	3.4e-25	tail completion or Neck1 protein	connector
UniRef90	UHGV-0173825_14	UniRef90_UPI001CCCF1DE	112.0	3.09e-29	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0173825_14	1540257.JQMW01000009_gene3375	105.0	3.04e-27	N/A	N/A
Pfam	UHGV-0173825_14	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0173825_14	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0173825_14	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0173825_15	PF12206,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0173825_16	phrog_132	48.9	0.00000000000011	head-tail adaptor	connector
UniRef90	UHGV-0173825_16	UniRef90_UPI00040A5A8D	62.4	0.000000000133	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0173825_16	1123405.AUMM01000039_gene148	62.4	0.0000000000222	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0173825_16	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0173825_16	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0173825_17	phrog_544	63.7	5.6e-20	major head protein	head and packaging
UniRef90	UHGV-0173825_17	UniRef90_A0A6N3FT63	245.0	0	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-0173825_17	642492.Clole_0972	216.0	0	N/A	N/A
structural_annotation	UHGV-0173825_17	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0173825_18	phrog_172	86.9	3.2e-25	head scaffolding protein	head and packaging
UniRef90	UHGV-0173825_18	UniRef90_UPI00085C378A	123.0	4.21e-32	N/A	N/A
eggNOG-mapper	UHGV-0173825_18	1504823.CCMM01000008_gene1042	65.5	0.000000000162	N/A	N/A
Pfam	UHGV-0173825_18	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0173825_18	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0173825_19	phrog_6332	56.2	4.2e-16	N/A	unknown function
UniRef90	UHGV-0173825_19	UniRef90_A0A1H9FZ10	73.6	7.78e-16	Cysteine-rich CPCC	N/A
eggNOG-mapper	UHGV-0173825_19	1423755.BAML01000009_gene803	53.1	0.000000016	Cysteine-rich CPCC	N/A
Pfam	UHGV-0173825_19	PF14206	N/A	N/A	Cysteine-rich CPCC	Cys_rich_CPCC
structural_annotation	UHGV-0173825_19	PF14206	N/A	N/A	N/A	N/A
PHROG	UHGV-0173825_20	phrog_115	171.7	0	minor head protein	head and packaging
UniRef90	UHGV-0173825_20	UniRef90_A0A6N3FUV3	155.0	4.57005e-41	Phage Mu protein F like protein	N/A
eggNOG-mapper	UHGV-0173825_20	743719.PaelaDRAFT_2397	89.4	2.82e-16	Phage Mu protein F like protein	N/A
Pfam	UHGV-0173825_20	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0173825_20	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0173825_20	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0173825_20	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0173825_21	phrog_64	351.2	0	portal protein	head and packaging
UniRef90	UHGV-0173825_21	UniRef90_A0A843HXP9	401.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0173825_21	1123250.KB908417_gene647	241.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0173825_21	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0173825_21	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0173825_21	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0173825_24	K06909	318.9	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0173825_24	phrog_3717	180.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0173825_24	UniRef90_UPI0018AA0488	441.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0173825_24	702450.CUW_0531	379.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0173825_24	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0173825_24	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0173825_24	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0173825_24	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0173825_24	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
Pfam	UHGV-0173825_25	PF13022	N/A	N/A	Helix-turn-helix of insertion element transposase	HTH_Tnp_1_2
structural_annotation	UHGV-0173825_25	PF13022	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0173825_26	41431.PCC8801_1674	60.5	0.00000000205	N/A	N/A
structural_annotation	UHGV-0173825_26	PF11645,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0173825_27	phrog_14030	83.3	1.7e-24	N/A	unknown function
UniRef90	UHGV-0173825_27	UniRef90_A0A7X9GLW9	134.0	4.62e-34	LysM peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0173825_27	1235800.C819_00464	164.0	6.16571e-44	N/A	N/A
Pfam	UHGV-0173825_27	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1