UHGV-0174380 (vOTU-121896)

Viral Genome: UHGV-0174380

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0174380
vOTU ID	vOTU-121896
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_585536
Associated Biosample	SAMN09781789
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	75.41 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	12
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9749
Viral Hallmark Genes (geNomad)	10
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	28.14
Jumbo Phage?	No

Genome Content
Length (bps)	34,233
GC Content	42.73%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	56
CDS Density	92%
Average CDS Length (bps)	561.70
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 75.41)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
COG	UHGV-0174380_1	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0174380_2	phrog_16427	61.4	1.8e-17	DNA methyltransferase	other
UniRef90	UHGV-0174380_2	UniRef90_A0A8D9UIK6	244.0	0	Cytosine specific methyltransferase	N/A
eggNOG-mapper	UHGV-0174380_2	365659.smi_0434	71.6	0.000000000000957	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0174380_2	oMTase_00023	58.4	5e-17	orphan methyltransferase	RM
Pfam	UHGV-0174380_2	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0174380_2	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0174380_3	phrog_7839	65.3	9.6e-19	N/A	unknown function
UniRef90	UHGV-0174380_3	UniRef90_A0A413HUB9	152.0	8.26766e-44	N/A	N/A
eggNOG-mapper	UHGV-0174380_3	1410650.JHWL01000003_gene2844	98.6	7.18e-24	N/A	N/A
Pfam	UHGV-0174380_3	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0174380_3	PF08860	N/A	N/A	N/A	N/A
PHROG	UHGV-0174380_4	phrog_26165	57.0	4e-16	N/A	unknown function
UniRef90	UHGV-0174380_5	UniRef90_A0A1C5RYU8	119.0	3.45e-34	Restriction alleviation protein, Lar family	N/A
Pfam	UHGV-0174380_5	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-0174380_5	NF007260	N/A	N/A	N/A	N/A
PHROG	UHGV-0174380_8	phrog_874	176.3	0	N/A	unknown function
UniRef90	UHGV-0174380_8	UniRef90_UPI0018F57B3A	226.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0174380_8	411468.CLOSCI_00298	214.0	0	N/A	N/A
structural_annotation	UHGV-0174380_8	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-0174380_9	phrog_2340	102.1	7.5e-30	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0174380_9	UniRef90_A0A5Q2W8Q2	78.2	0.00000000000000469	Restriction endonuclease Hpy99I-like protein	N/A
eggNOG-mapper	UHGV-0174380_9	221915.Q6Y7N0_BPPGK	68.6	0.00000000000497	N/A	N/A
Pfam	UHGV-0174380_9	PF07460	N/A	N/A	NUMOD3 motif	NUMOD3
eggNOG-mapper	UHGV-0174380_10	397290.C810_01492	66.6	0.00000000000381	N/A	N/A
KOfam	UHGV-0174380_15	K07474	103.4	5e-30	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0174380_15	phrog_51	110.3	1.9e-32	terminase small subunit	head and packaging
UniRef90	UHGV-0174380_15	UniRef90_A0A416ZL36	151.0	1.54143e-44	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0174380_15	476272.RUMHYD_01754	130.0	3.8e-37	Terminase small subunit	N/A
Pfam	UHGV-0174380_15	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0174380_15	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0174380_15	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0174380_16	K06909	329.6	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0174380_16	phrog_3717	166.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0174380_16	UniRef90_A0A395X9V4	783.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0174380_16	33035.JPJF01000106_gene3136	404.0	0	Terminase small subunit	N/A
Pfam	UHGV-0174380_16	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0174380_16	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0174380_16	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0174380_16	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0174380_17	phrog_533	293.0	0	portal protein	head and packaging
UniRef90	UHGV-0174380_17	UniRef90_A0A1C6CDM8	683.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0174380_17	33035.JPJF01000106_gene3135	508.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0174380_17	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0174380_19	phrog_581	255.1	0	minor head protein	head and packaging
UniRef90	UHGV-0174380_19	UniRef90_A0A1C6CDG2	498.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0174380_19	33035.JPJF01000106_gene3134	409.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0174380_19	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0174380_19	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0174380_19	PF06152	N/A	N/A	N/A	N/A
UniRef90	UHGV-0174380_21	UniRef90_A0A417UWY7	120.0	3.49e-33	CTP synthase	N/A
eggNOG-mapper	UHGV-0174380_21	411490.ANACAC_00705	58.5	0.000000000923	N/A	N/A
PHROG	UHGV-0174380_22	phrog_21718	67.0	3.2e-19	N/A	unknown function
UniRef90	UHGV-0174380_22	UniRef90_A0A8D9PDT7	65.9	0.0000000000189	Membrane fusogenic activity protein	N/A
eggNOG-mapper	UHGV-0174380_22	1235790.C805_00058	98.2	8.82e-24	N/A	N/A
eggNOG-mapper	UHGV-0174380_24	476272.RUMHYD_01770	78.6	0.00000000000000669	N/A	N/A
PHROG	UHGV-0174380_25	phrog_20016	67.2	2.1e-19	N/A	unknown function
UniRef90	UHGV-0174380_25	UniRef90_A0A316MV88	209.0	0	BclA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0174380_25	1226322.HMPREF1545_00077	70.9	0.000000000000128	N/A	N/A
structural_annotation	UHGV-0174380_25	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0174380_26	PF00210,MF_01441,NF011597,COG1528	N/A	N/A	N/A	N/A
UniRef90	UHGV-0174380_28	UniRef90_UPI001C0EBA51	315.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0174380_28	742765.HMPREF9457_02126	99.8	2.7e-23	COG NOG36366 non supervised orthologous group	N/A
PHROG	UHGV-0174380_29	phrog_247	228.9	0	major head protein	head and packaging
UniRef90	UHGV-0174380_29	UniRef90_UPI001BA5448B	282.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0174380_29	33035.JPJF01000106_gene3132	553.0	0	N/A	N/A
structural_annotation	UHGV-0174380_29	PF20036,MF_04113,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0174380_30	phrog_541	94.3	8.6e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-0174380_30	476272.RUMHYD_01778	129.0	5.72e-36	N/A	N/A
PHROG	UHGV-0174380_31	phrog_18218	142.6	1.00053e-42	N/A	unknown function
UniRef90	UHGV-0174380_31	UniRef90_A0A8D9PGR5	153.0	0	Holin	N/A
eggNOG-mapper	UHGV-0174380_31	411902.CLOBOL_03424	78.2	2.89e-17	N/A	N/A
structural_annotation	UHGV-0174380_31	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0174380_32	phrog_8680	237.9	0	N/A	unknown function
UniRef90	UHGV-0174380_32	UniRef90_UPI001C0F342A	409.0	0	N/A	N/A
eggNOG-mapper	UHGV-0174380_32	411470.RUMGNA_02208	293.0	0	N/A	N/A
Pfam	UHGV-0174380_32	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0174380_32	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0174380_33	phrog_3366	105.0	4.6e-31	N/A	unknown function
eggNOG-mapper	UHGV-0174380_33	476272.RUMHYD_01779	149.0	4.48416e-44	N/A	N/A
structural_annotation	UHGV-0174380_33	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0174380_35	phrog_556	61.9	9.1e-18	minor head protein	head and packaging
UniRef90	UHGV-0174380_35	UniRef90_UPI0008B4CFF0	160.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0174380_35	476272.RUMHYD_01780	165.0	0	N/A	N/A
structural_annotation	UHGV-0174380_35	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0174380_36	phrog_3266	91.5	7.3e-27	tail completion	connector
eggNOG-mapper	UHGV-0174380_36	476272.RUMHYD_01781	147.0	5.47908e-43	N/A	N/A
structural_annotation	UHGV-0174380_36	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0174380_37	phrog_3099	80.0	3.7e-23	N/A	unknown function
structural_annotation	UHGV-0174380_37	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0174380_38	UniRef90_A0A3B9CD56	117.0	1.91e-30	RNA polymerase subunit sigma	N/A
eggNOG-mapper	UHGV-0174380_38	1235790.C805_00083	57.0	0.0000000695	N/A	N/A
structural_annotation	UHGV-0174380_38	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0174380_39	phrog_706	124.8	6.5e-37	N/A	unknown function
UniRef90	UHGV-0174380_39	UniRef90_C7GBZ7	244.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0174380_39	1235790.C805_00084	140.0	3.4e-39	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0174380_39	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0174380_39	PF06854	N/A	N/A	N/A	N/A
KOfam	UHGV-0174380_40	K10421	41.4	0.0000000000088	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-0174380_40	phrog_1535	102.0	1.4013e-45	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0174380_40	1280692.AUJL01000027_gene2150	79.7	0.00000000000232	phage tail tape measure protein	N/A
COG	UHGV-0174380_40	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0174380_41	phrog_1194	52.4	0.0000000000000085	N/A	unknown function
eggNOG-mapper	UHGV-0174380_41	1120746.CCNL01000014_gene2106	119.0	6.09e-33	N/A	N/A
structural_annotation	UHGV-0174380_41	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0174380_42	phrog_13879	267.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0174380_42	1120746.CCNL01000014_gene2107	341.0	0	N/A	N/A
structural_annotation	UHGV-0174380_42	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0174380_44	phrog_18725	74.9	2.2e-22	N/A	unknown function
KOfam	UHGV-0174380_47	K04763	127.3	2e-37	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0174380_47	phrog_1	102.6	5.3e-30	integrase	integration and excision
UniRef90	UHGV-0174380_47	UniRef90_A0A351URM1	335.0	0	Tyr recombinase domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0174380_47	610130.Closa_0719	208.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0174380_47	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0174380_47	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0174380_47	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0174380_47	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
KOfam	UHGV-0174380_48	K01448	109.1	5.4e-32	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0174380_48	phrog_435	199.5	0	endolysin	lysis
UniRef90	UHGV-0174380_48	UniRef90_A0A373BKV9	349.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0174380_48	411490.ANACAC_00597	200.0	0	Cell wall hydrolase autolysin	N/A
Pfam	UHGV-0174380_48	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0174380_48	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-0174380_48	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0174380_48	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
UniRef90	UHGV-0174380_51	UniRef90_A0A2N5NVL9	81.3	2.31e-17	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0174380_51	411470.RUMGNA_03786	81.3	3.88e-18	Helix-turn-helix XRE-family like proteins	N/A
COG	UHGV-0174380_51	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-0174380_53	K14059	156.3	0	int; integrase	N/A
PHROG	UHGV-0174380_53	phrog_1	152.3	4.2039e-45	integrase	integration and excision
UniRef90	UHGV-0174380_53	UniRef90_A0A1C6K4B6	377.0	0	Tyrosine recombinase XerD	N/A
eggNOG-mapper	UHGV-0174380_53	742740.HMPREF9474_03478	379.0	0	DNA integration	N/A
Pfam	UHGV-0174380_53	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0174380_53	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0174380_53	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0174380_54	phrog_806	83.6	3.6e-24	N/A	unknown function
UniRef90	UHGV-0174380_54	UniRef90_A0A1M4TTZ5	177.0	0	N/A	N/A
eggNOG-mapper	UHGV-0174380_54	397290.C810_05150	161.0	0	N/A	N/A
Pfam	UHGV-0174380_54	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0174380_54	PF11611	N/A	N/A	N/A	DUF4352
structural_annotation	UHGV-0174380_54	PF11611,MF_00791,NF003967,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-0174380_56	phrog_2967	47.9	0.00000000000013	transcriptional regulator	transcription regulation
UniRef90	UHGV-0174380_56	UniRef90_A0A416SLU4	162.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0174380_56	1235798.C817_00620	64.7	0.0000000000192	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0174380_56	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0174380_56	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0174380_56	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A