UHGV-0175103 (vOTU-069113)

Viral Genome: UHGV-0175103

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0175103
vOTU ID	vOTU-069113
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_591888
Associated Biosample	SAMN09781733
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	94.05 (High-quality)
Trimmed?	No
CheckV Viral Markers	13
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9814
Viral Hallmark Genes (geNomad)	11
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	26.74
Jumbo Phage?	No

Genome Content
Length (bps)	34,646
GC Content	58.94%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	63
CDS Density	93%
Average CDS Length (bps)	513.86
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 94.05)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0175103_1	phrog_37549	81.3	1.2e-26	virion structural protein	head and packaging
UniRef90	UHGV-0175103_1	UniRef90_A0A3D0W045	215.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-0175103_1	1195236.CTER_5103	128.0	2.16e-28	N/A	N/A
structural_annotation	UHGV-0175103_1	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0175103_2	phrog_33680	143.7	1.19951e-42	N/A	unknown function
UniRef90	UHGV-0175103_2	UniRef90_UPI00098F054B	230.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0175103_2	1195236.CTER_5104	222.0	0	nuclear chromosome segregation	N/A
COG	UHGV-0175103_2	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0175103_2	TIGR01760,NF033928	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0175103_4	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0175103_5	phrog_88	82.7	4.8e-24	major tail protein	tail
UniRef90	UHGV-0175103_5	UniRef90_S0FUN2	115.0	6.67e-29	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0175103_5	1195236.CTER_5106	115.0	1.12e-29	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0175103_5	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0175103_5	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0175103_5	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0175103_6	phrog_5	46.2	0.00000000000096	tail completion or Neck1 protein	connector
structural_annotation	UHGV-0175103_6	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0175103_7	1487921.DP68_11350	61.2	0.000000000099	N/A	N/A
structural_annotation	UHGV-0175103_7	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0175103_8	phrog_1951	75.6	4.6e-22	head-tail adaptor	connector
UniRef90	UHGV-0175103_8	UniRef90_UPI001B02B074	64.7	0.0000000000183	phage head closure protein	N/A
eggNOG-mapper	UHGV-0175103_8	1094508.Tsac_2422	53.5	0.0000000802	Phage head-tail joining protein	N/A
Pfam	UHGV-0175103_8	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0175103_8	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0175103_8	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0175103_8	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0175103_9	phrog_5223	45.3	0.0000000000012	neck protein	connector
UniRef90	UHGV-0175103_9	UniRef90_E6MGY0	58.9	0.00000000251	Putative phage DNA packaging protein	N/A
eggNOG-mapper	UHGV-0175103_9	887929.HMP0721_1264	58.9	0.000000000421	N/A	N/A
PHROG	UHGV-0175103_10	phrog_10	180.1	0	major head protein	head and packaging
UniRef90	UHGV-0175103_10	UniRef90_UPI00189AE5FE	405.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0175103_10	1280689.AUJC01000011_gene1521	391.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0175103_10	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0175103_10	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0175103_10	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0175103_10	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0175103_11	K01358	132.0	7.1e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0175103_11	phrog_94	196.2	0	head maturation protease	head and packaging
UniRef90	UHGV-0175103_11	UniRef90_UPI0018979DC8	201.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0175103_11	1280689.AUJC01000011_gene1520	187.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0175103_11	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0175103_11	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0175103_11	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0175103_12	phrog_12	179.4	0	portal protein	head and packaging
UniRef90	UHGV-0175103_12	UniRef90_C4GAS6	504.0	0	Putative phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0175103_12	626523.GCWU000342_01027	504.0	0	Portal protein	N/A
Pfam	UHGV-0175103_12	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0175103_12	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0175103_12	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0175103_13	phrog_9	384.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0175103_13	UniRef90_A0A1Y3W5R1	790.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0175103_13	1203606.HMPREF1526_00981	744.0	0	Terminase	N/A
Pfam	UHGV-0175103_13	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0175103_13	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0175103_13	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0175103_13	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0175103_14	phrog_1066	127.8	4e-38	N/A	unknown function
eggNOG-mapper	UHGV-0175103_14	1382358.JHVN01000024_gene1703	124.0	4.78e-35	N/A	N/A
structural_annotation	UHGV-0175103_14	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-0175103_15	phrog_119	49.7	0.000000000000051	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0175103_15	UniRef90_A0A174XSZ8	125.0	4.14e-35	Prophage LambdaBa04, GP54	N/A
eggNOG-mapper	UHGV-0175103_15	1235793.C809_01915	122.0	3.02e-34	HNH endonuclease	N/A
Pfam	UHGV-0175103_15	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0175103_15	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
eggNOG-mapper	UHGV-0175103_16	1297617.JPJD01000059_gene2640	84.7	3.61e-19	N/A	N/A
structural_annotation	UHGV-0175103_16	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0175103_17	phrog_3584	112.2	4.2e-33	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0175103_17	537013.CLOSTMETH_02141	76.3	0.0000000000000352	N/A	N/A
structural_annotation	UHGV-0175103_17	PF21578,MF_00360	N/A	N/A	N/A	N/A
PHROG	UHGV-0175103_21	phrog_374	56.6	5.8e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0175103_21	1423807.BACO01000037_gene1103	67.8	0.00000000000233	N/A	N/A
PHROG	UHGV-0175103_23	phrog_190	104.3	1.2e-30	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0175103_23	UniRef90_UPI0006C2AC63	132.0	9.95e-37	N/A	N/A
eggNOG-mapper	UHGV-0175103_23	1226322.HMPREF1545_00295	114.0	3.25e-30	N/A	N/A
Pfam	UHGV-0175103_23	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0175103_23	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0175103_26	phrog_3136	132.6	1.4e-39	N/A	unknown function
UniRef90	UHGV-0175103_26	UniRef90_A0A843H9M8	97.8	3.8e-22	ASCH domain-containing protein	N/A
COG	UHGV-0175103_26	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0175103_26	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0175103_27	phrog_424	98.8	6.3e-29	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0175103_27	UniRef90_A0A1Q6JI14	354.0	0	Phosphoadenosine phosphosulfate reductase	N/A
eggNOG-mapper	UHGV-0175103_27	1410628.JNKS01000054_gene544	300.0	0	N/A	N/A
Pfam	UHGV-0175103_27	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0175103_27	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0175103_27	PF01507,MF_01161,NF006327,COG0175	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0175103_31	PF05082	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0175103_32	NF041247	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0175103_34	PF10548	N/A	N/A	N/A	N/A
KOfam	UHGV-0175103_40	K18830	55.7	0.0000000000000012	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0175103_40	phrog_8	55.8	7.5e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0175103_40	UniRef90_A0A2U1BEG8	126.0	3.51e-35	Helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0175103_40	445972.ANACOL_03315	112.0	1.4e-30	N/A	N/A
PADLOC	UHGV-0175103_40	retron_type_VI_hth_cluster2_1	41.4	0.000000000032	N/A	Retron
Pfam	UHGV-0175103_40	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0175103_40	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0175103_40	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0175103_41	585394.RHOM_06430	60.8	0.0000000169	Competence protein ComEC	N/A
COG	UHGV-0175103_41	COG2333	N/A	N/A	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	N/A
structural_annotation	UHGV-0175103_41	PF02805	N/A	N/A	N/A	N/A
PHROG	UHGV-0175103_42	phrog_10292	78.5	8.7e-23	N/A	unknown function
UniRef90	UHGV-0175103_42	UniRef90_A0A416W984	107.0	4.33e-27	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0175103_42	1033810.HLPCO_001631	90.9	1.45e-21	TM2 domain	N/A
Pfam	UHGV-0175103_42	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0175103_42	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-0175103_42	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-0175103_43	K22299	47.9	0.00000000000027	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
Pfam	UHGV-0175103_43	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0175103_43	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-0175103_43	PF13560,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0175103_44	K06400	252.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0175103_44	phrog_95	266.0	0	integrase	integration and excision
UniRef90	UHGV-0175103_44	UniRef90_G9YSD9	417.0	0	Resolvase protein	N/A
eggNOG-mapper	UHGV-0175103_44	1408437.JNJN01000002_gene1420	407.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0175103_44	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0175103_44	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0175103_44	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0175103_44	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0175103_44	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-0175103_45	UniRef90_A0A7M1RTM1	78.6	0.0000000000000042	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0175103_45	1378168.N510_03079	70.1	0.00000000000285	N/A	N/A
PHROG	UHGV-0175103_49	phrog_14030	142.2	3.20057e-42	N/A	unknown function
UniRef90	UHGV-0175103_49	UniRef90_R6LL81	246.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-0175103_49	1121866.AUGK01000003_gene1444	96.3	4.22e-20	amidase activity	N/A
COG	UHGV-0175103_49	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-0175103_50	phrog_6918	95.6	3.3e-28	holin	lysis
UniRef90	UHGV-0175103_50	UniRef90_A0A316QCY7	103.0	1.73e-26	Holin	N/A
eggNOG-mapper	UHGV-0175103_50	1297617.JPJD01000020_gene301	101.0	1.21e-26	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0175103_50	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0175103_50	PF09682,TIGR01673	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0175103_54	1519439.JPJG01000060_gene1895	60.8	0.00000000432	N/A	N/A
structural_annotation	UHGV-0175103_54	PF10618	N/A	N/A	N/A	N/A
PHROG	UHGV-0175103_56	phrog_10993	68.4	8.1e-20	Hoc-like head decoration	head and packaging
UniRef90	UHGV-0175103_56	UniRef90_UPI000834AF98	105.0	4.11e-23	N/A	N/A
eggNOG-mapper	UHGV-0175103_56	742738.HMPREF9460_02534	72.8	0.00000000000926	N/A	N/A
Pfam	UHGV-0175103_56	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0175103_56	PF19789	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0175103_57	1519439.JPJG01000060_gene1892	53.5	0.000000655	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-0175103_57	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
PHROG	UHGV-0175103_58	phrog_10898	41.3	0.000000000025	N/A	unknown function
structural_annotation	UHGV-0175103_58	PF16408,NF033510	N/A	N/A	N/A	N/A
PHROG	UHGV-0175103_59	phrog_10898	287.5	0	N/A	unknown function
UniRef90	UHGV-0175103_59	UniRef90_A0A7U3NJT3	187.0	0	Putative Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0175103_59	717606.PaecuDRAFT_2136	68.2	0.000000000207	S-layer homology domain	N/A
COG	UHGV-0175103_59	COG1520	N/A	N/A	Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat	N/A
structural_annotation	UHGV-0175103_59	PF19081,PF15418,MF_01905,NF032891,COG3291	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0175103_61	PF10651	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0175103_62	PF18614,MF_00085,NF003076	N/A	N/A	N/A	N/A
PHROG	UHGV-0175103_63	phrog_26795	128.5	1.1e-38	N/A	unknown function
UniRef90	UHGV-0175103_63	UniRef90_A0A5J6T4K8	132.0	2.15e-31	Minor tail protein	N/A
eggNOG-mapper	UHGV-0175103_63	1382315.JPOI01000001_gene271	133.0	4.59e-33	N/A	N/A
structural_annotation	UHGV-0175103_63	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A