UHGV-0176303 (vOTU-046577)

Viral Genome: UHGV-0176303

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0176303
vOTU ID	vOTU-046577
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_592457
Associated Biosample	SAMN09781743
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	15
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9796
Viral Hallmark Genes (geNomad)	8
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	34.07
Jumbo Phage?	No

Genome Content
Length (bps)	44,746
GC Content	54.95%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	70
CDS Density	91%
Average CDS Length (bps)	578.79
Total tRNA Genes	2
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0176303_1	phrog_7566	64.9	1.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-0176303_1	693746.OBV_25470	67.8	0.000000000000223	N/A	N/A
PHROG	UHGV-0176303_2	phrog_72	59.0	5.9e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0176303_2	UniRef90_UPI000C7BF263	165.0	0	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0176303_2	445972.ANACOL_01825	142.0	7.01994e-41	N/A	N/A
structural_annotation	UHGV-0176303_2	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0176303_3	phrog_7838	132.2	3.7e-39	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0176303_3	UniRef90_A0A8D9UGW3	231.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0176303_3	742767.HMPREF9456_02052	181.0	0	N/A	N/A
structural_annotation	UHGV-0176303_3	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
PHROG	UHGV-0176303_4	phrog_253	115.2	5.2e-34	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0176303_4	UniRef90_E2ZNS5	150.0	8.40779e-44	Siphovirus Gp157	N/A
eggNOG-mapper	UHGV-0176303_4	748224.HMPREF9436_03356	150.0	1.4013e-44	Siphovirus Gp157	N/A
Pfam	UHGV-0176303_4	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0176303_4	PF05565	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0176303_8	PF11034	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0176303_9	760568.Desku_0919	83.6	5.37e-17	N/A	N/A
structural_annotation	UHGV-0176303_9	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0176303_10	PF10743,NF033787	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0176303_11	PF21611	N/A	N/A	N/A	N/A
KOfam	UHGV-0176303_13	K07741	57.8	3.8e-16	antB; anti-repressor protein	N/A
PHROG	UHGV-0176303_13	phrog_130	160.4	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0176303_13	UniRef90_UPI001475C7F0	239.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0176303_13	1151292.QEW_0652	206.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0176303_13	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0176303_13	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0176303_13	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0176303_13	PF03374,PF02498,COG3645	N/A	N/A	N/A	N/A
UniRef90	UHGV-0176303_14	UniRef90_UPI0018995761	82.8	1.6e-19	helix-turn-helix transcriptional regulator	N/A
structural_annotation	UHGV-0176303_14	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0176303_15	1507.HMPREF0262_00424	54.3	0.000000177	Cro/C1-type HTH DNA-binding domain	N/A
COG	UHGV-0176303_15	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0176303_15	PF12844,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0176303_17	936596.HMPREF1495_0309	59.3	0.0000000031	Bacterial Ig-like domain (group 2)	N/A
COG	UHGV-0176303_17	COG5492	N/A	N/A	N/A	N/A
Pfam	UHGV-0176303_18	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0176303_18	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0176303_18	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0176303_19	K14059	95.2	1e-27	int; integrase	N/A
PHROG	UHGV-0176303_19	phrog_1	101.5	1.1e-29	integrase	integration and excision
UniRef90	UHGV-0176303_19	UniRef90_UPI001897E1C8	158.0	5.87999e-41	site-specific integrase	N/A
eggNOG-mapper	UHGV-0176303_19	411471.SUBVAR_07390	96.7	7e-20	Phage integrase family	N/A
Pfam	UHGV-0176303_19	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0176303_19	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0176303_19	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
UniRef90	UHGV-0176303_20	UniRef90_A0A4R1R5G7	77.8	3.22e-18	Anaerobic ribonucleoside-triphosphate reductase-like protein	N/A
eggNOG-mapper	UHGV-0176303_20	658088.HMPREF0987_00997	76.3	2.21e-18	Anaerobic ribonucleoside-triphosphate reductase	N/A
Pfam	UHGV-0176303_20	PF13597	N/A	N/A	Anaerobic ribonucleoside-triphosphate reductase	NRDD
COG	UHGV-0176303_20	COG1328	N/A	N/A	Anaerobic ribonucleoside-triphosphate reductase	N/A
eggNOG-mapper	UHGV-0176303_21	1408437.JNJN01000060_gene452	251.0	0	heme binding	N/A
COG	UHGV-0176303_21	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
structural_annotation	UHGV-0176303_23	PF00210,MF_01441,NF011597,COG1528	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0176303_26	PF07638,MF_00674,TIGR02954,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-0176303_27	phrog_1129	78.1	7.2e-23	holin	lysis
UniRef90	UHGV-0176303_27	UniRef90_A0A3R5ZDU6	134.0	2.5e-39	Holin	N/A
eggNOG-mapper	UHGV-0176303_27	1256908.HMPREF0373_00463	126.0	4.71e-37	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0176303_27	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0176303_27	PF06946	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0176303_28	97138.C820_00248	62.4	0.00000000000891	N/A	N/A
KOfam	UHGV-0176303_29	K07273	207.1	0	acm; lysozyme	N/A
PHROG	UHGV-0176303_29	phrog_291	156.2	0	endolysin	lysis
UniRef90	UHGV-0176303_29	UniRef90_UPI00164A97A0	204.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-0176303_29	537013.CLOSTMETH_03464	161.0	3.78351e-44	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0176303_29	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0176303_29	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0176303_29	PF01183,PF05194,COG3757	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0176303_31	290402.Cbei_3386	61.2	0.000000065	N/A	N/A
PHROG	UHGV-0176303_32	phrog_13589	205.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0176303_32	411460.RUMTOR_01324	243.0	0	N/A	N/A
PHROG	UHGV-0176303_33	phrog_31538	56.2	6.8e-16	N/A	unknown function
PHROG	UHGV-0176303_34	phrog_15594	83.4	1.9e-24	N/A	unknown function
eggNOG-mapper	UHGV-0176303_34	1118055.CAGU01000013_gene763	65.9	0.00000000000115	N/A	N/A
structural_annotation	UHGV-0176303_34	PF16640,TIGR04488	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0176303_35	665956.HMPREF1032_03918	110.0	1.03e-24	prophage protein Bartonella henselae str. Houston-1 gi 49237922 emb CAF27125.1	N/A
PHROG	UHGV-0176303_36	phrog_13046	45.2	0.00000000000073	N/A	unknown function
eggNOG-mapper	UHGV-0176303_36	693746.OBV_23880	108.0	1.33e-26	N/A	N/A
structural_annotation	UHGV-0176303_36	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0176303_37	phrog_156	233.3	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0176303_37	693746.OBV_23930	461.0	0	N/A	N/A
structural_annotation	UHGV-0176303_37	PF12236,MF_04120,TIGR01542,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-0176303_38	phrog_371	139.6	1.29998e-41	major head protein	head and packaging
UniRef90	UHGV-0176303_38	UniRef90_A0A1Y4TDW7	478.0	0	Mu-like_gpT domain-containing protein	N/A
eggNOG-mapper	UHGV-0176303_38	1226322.HMPREF1545_03848	289.0	0	N/A	N/A
Pfam	UHGV-0176303_38	PF10124	N/A	N/A	Mu-like prophage major head subunit gpT	Mu-like_gpT
structural_annotation	UHGV-0176303_38	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0176303_39	phrog_24113	54.3	0.0000000000000019	N/A	unknown function
eggNOG-mapper	UHGV-0176303_39	1226322.HMPREF1545_03847	50.4	0.00000465	N/A	N/A
structural_annotation	UHGV-0176303_39	PF11133,COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-0176303_40	phrog_35275	60.9	1.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-0176303_40	1226322.HMPREF1545_03846	70.9	0.0000000000282	N/A	N/A
PHROG	UHGV-0176303_42	phrog_3287	178.5	0	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0176303_42	665956.HMPREF1032_03917	669.0	0	N/A	N/A
structural_annotation	UHGV-0176303_42	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
KOfam	UHGV-0176303_43	K21523	47.6	0.000000000000079	gp17; terminase, large subunit [EC:3.1.-.-]	N/A
PHROG	UHGV-0176303_43	phrog_2	101.5	1.2e-29	terminase large subunit	head and packaging
UniRef90	UHGV-0176303_43	UniRef90_UPI001F401ABC	660.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-0176303_43	316274.Haur_1384	147.0	2.93e-36	N/A	N/A
Pfam	UHGV-0176303_43	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0176303_43	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-0176303_43	PF03354,PF17289,MF_04146,TIGR01547,COG4373	N/A	N/A	N/A	N/A
Pfam	UHGV-0176303_45	PF08681	N/A	N/A	N/A	DUF1778
structural_annotation	UHGV-0176303_45	PF03869	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0176303_50	469378.Ccur_02570	71.6	4.76e-16	N/A	N/A
UniRef90	UHGV-0176303_53	UniRef90_A0A3D0M2U4	110.0	5.71e-29	RHH_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0176303_53	1118055.CAGU01000028_gene99	107.0	2.22e-28	N/A	N/A
eggNOG-mapper	UHGV-0176303_54	1394176.AWUO01000014_gene642	98.6	1.84e-24	N/A	N/A
structural_annotation	UHGV-0176303_54	PF07825,TIGR01764,COG3311	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0176303_55	PF10013,COG4338	N/A	N/A	N/A	N/A
PHROG	UHGV-0176303_56	phrog_36	75.1	1.1e-21	transcriptional regulator	transcription regulation
Pfam	UHGV-0176303_56	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-0176303_56	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0176303_56	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0176303_58	phrog_6721	294.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0176303_58	665950.HMPREF1025_01974	270.0	0	N/A	N/A
structural_annotation	UHGV-0176303_58	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0176303_62	phrog_1233	54.3	0.0000000000000027	N/A	unknown function
UniRef90	UHGV-0176303_62	UniRef90_A0A116RB38	57.0	0.0000000166	N/A	N/A
eggNOG-mapper	UHGV-0176303_62	764299.STRIC_2132	51.6	0.000000335	N/A	N/A
Pfam	UHGV-0176303_62	PF10263	N/A	N/A	SprT-like family	SprT-like
structural_annotation	UHGV-0176303_62	PF06114	N/A	N/A	N/A	N/A
PHROG	UHGV-0176303_64	phrog_236	82.4	8.6e-24	nucleotide kinase	other
UniRef90	UHGV-0176303_64	UniRef90_UPI000D110E3A	94.7	3.72e-23	N/A	N/A
eggNOG-mapper	UHGV-0176303_64	1236504.HMPREF2132_11120	76.3	1.08e-16	N/A	N/A
Pfam	UHGV-0176303_64	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-0176303_64	PF11753	N/A	N/A	N/A	N/A
PHROG	UHGV-0176303_65	phrog_111	163.4	0	DNA methyltransferase	other
UniRef90	UHGV-0176303_65	UniRef90_UPI000B356992	221.0	0	adenine methyltransferase	N/A
eggNOG-mapper	UHGV-0176303_65	760568.Desku_0784	206.0	0	DNA N-6-adenine-methyltransferase	N/A
PADLOC	UHGV-0176303_65	oMTase_00015	179.2	0	orphan methyltransferase	RM
Pfam	UHGV-0176303_65	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
structural_annotation	UHGV-0176303_65	PF05869,MF_03187,TIGR01712,COG2263	N/A	N/A	N/A	N/A
PHROG	UHGV-0176303_66	phrog_2245	82.8	4.2e-24	nucleoside triphosphate pyrophosphohydrolase	other
eggNOG-mapper	UHGV-0176303_66	1499683.CCFF01000005_gene41	60.8	0.000000000072	N/A	N/A
structural_annotation	UHGV-0176303_66	NF001611,COG1694	N/A	N/A	N/A	N/A
KOfam	UHGV-0176303_67	K01160	44.5	0.0000000000038	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0176303_67	phrog_1682	67.0	3.1e-19	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0176303_67	UniRef90_A0A6N8IJL7	94.4	1.73e-22	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0176303_67	428125.CLOLEP_01819	82.8	1.06e-18	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-0176303_67	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0176303_67	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0176303_68	K02314	228.6	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0176303_68	phrog_19	218.2	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0176303_68	UniRef90_UPI001F1C052D	441.0	0	replicative DNA helicase	N/A
eggNOG-mapper	UHGV-0176303_68	1203606.HMPREF1526_01325	166.0	4.48416e-44	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0176303_68	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0176303_68	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0176303_68	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0176303_68	PF03796,PF00772,MF_04155,NF005240,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0176303_69	phrog_270	118.3	8.7e-35	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0176303_69	UniRef90_A0A7X3DHC7	94.4	1.48e-19	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0176303_69	720554.Clocl_0687	90.5	1.17e-18	HNH endonuclease	N/A
Pfam	UHGV-0176303_69	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0176303_69	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0176303_69	PF05584,MF_01819,TIGR01610,COG3355	N/A	N/A	N/A	N/A
KOfam	UHGV-0176303_70	K03111	118.8	7.7e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0176303_70	phrog_44	123.5	1.8e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0176303_70	UniRef90_R6I6X7	129.0	6.83e-36	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0176303_70	445972.ANACOL_01827	121.0	1.84e-33	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0176303_70	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0176303_70	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0176303_70	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0176303_70	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0176303_70	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A