UHGV-0177284 (vOTU-136477)

Viral Genome: UHGV-0177284

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0177284
vOTU ID	vOTU-136477
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_563632
Associated Biosample	SAMN06233224
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	51.78 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	6
CheckV Host Markers	2
Recoded?	No

Viral Content
geNomad score	0.9633
Viral Hallmark Genes (geNomad)	1
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Uncertain - plasmid or chromosomal
ViralVerify Score	2.55
Jumbo Phage?	No

Genome Content
Length (bps)	34,877
GC Content	42.04%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	67
CDS Density	84%
Average CDS Length (bps)	436.88
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 51.78)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0177284_1	K11072	568.3	0	potA; spermidine/putrescine transport system ATP-binding protein [EC:7.6.2.11]	N/A
PHROG	UHGV-0177284_1	phrog_293	251.1	0	ABC transporter	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0177284_1	UniRef90_A0A108TDJ4	780.0	0	Spermidine/putrescine import ATP-binding protein PotA	N/A
eggNOG-mapper	UHGV-0177284_1	411479.BACUNI_02181	828.0	0	Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system	N/A
Pfam	UHGV-0177284_1	PF00005	N/A	N/A	ABC transporter	ABC_tran
Pfam	UHGV-0177284_1	PF08402	N/A	N/A	TOBE domain	TOBE_2
NCBIFam	UHGV-0177284_1	TIGR01187.1	N/A	N/A	polyamine ABC transporter ATP-binding protein	N/A
COG	UHGV-0177284_1	COG3842	N/A	N/A	ABC-type Fe3+/spermidine/putrescine transport systems, ATPase component	N/A
UniRef90	UHGV-0177284_2	UniRef90_UPI00031B27D1	95.1	5.21e-24	plasmid recombination protein	N/A
eggNOG-mapper	UHGV-0177284_2	1122931.AUAE01000008_gene4134	104.0	3.73e-25	Plasmid recombination enzyme	N/A
COG	UHGV-0177284_2	COG1193	N/A	N/A	dsDNA-specific endonuclease/ATPase MutS2	N/A
UniRef90	UHGV-0177284_3	UniRef90_A0A414IKV2	590.0	0	N/A	N/A
eggNOG-mapper	UHGV-0177284_3	547042.BACCOPRO_00907	590.0	0	N/A	N/A
Pfam	UHGV-0177284_3	PF14302	N/A	N/A	N/A	DUF4377
UniRef90	UHGV-0177284_4	UniRef90_A0A415NPP5	703.0	0	N/A	N/A
eggNOG-mapper	UHGV-0177284_4	547042.BACCOPRO_00908	727.0	0	N/A	N/A
Pfam	UHGV-0177284_4	PF16144	N/A	N/A	N/A	DUF4852
eggNOG-mapper	UHGV-0177284_5	547042.BACCOPRO_00909	55.8	0.000000000922	N/A	N/A
KOfam	UHGV-0177284_6	K16066	398.3	0	ydfG; 3-hydroxy acid dehydrogenase / malonic semialdehyde reductase [EC:1.1.1.381 1.1.1.-]	N/A
PHROG	UHGV-0177284_6	phrog_3142	169.1	0	FabG-like 3-oxoacyl-(acyl-carrier-protein) reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0177284_6	UniRef90_A0A108TDD6	453.0	0	Putative NADP-dependent 3-hydroxy acid dehydrogenase, YdfG-like	N/A
eggNOG-mapper	UHGV-0177284_6	585543.HMPREF0969_00560	480.0	0	Belongs to the short-chain dehydrogenases reductases (SDR) family	N/A
Pfam	UHGV-0177284_6	PF00106	N/A	N/A	short chain dehydrogenase	adh_short
COG	UHGV-0177284_6	COG4221	N/A	N/A	NADP-dependent 3-hydroxy acid dehydrogenase YdfG	N/A
KOfam	UHGV-0177284_7	K07407	173.1	0	E3.2.1.22B, galA, rafA; alpha-galactosidase [EC:3.2.1.22]	N/A
UniRef90	UHGV-0177284_7	UniRef90_A0A139JUW3	1476.0	0	Alpha-galactosidase	N/A
eggNOG-mapper	UHGV-0177284_7	411479.BACUNI_02183	1476.0	0	COG3345 Alpha-galactosidase	N/A
Pfam	UHGV-0177284_7	PF16875	N/A	N/A	Glycosyl hydrolase family 36 N-terminal domain	Glyco_hydro_36N
Pfam	UHGV-0177284_7	PF02065	N/A	N/A	Melibiase	Melibiase
Pfam	UHGV-0177284_7	PF16874	N/A	N/A	Glycosyl hydrolase family 36 C-terminal domain	Glyco_hydro_36C
COG	UHGV-0177284_7	COG3345	N/A	N/A	Alpha-galactosidase	N/A
UniRef90	UHGV-0177284_8	UniRef90_UPI00037006A4	56.6	0.0000000515	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0177284_8	1121100.JCM6294_554	101.0	1.43e-26	N/A	N/A
UniRef90	UHGV-0177284_9	UniRef90_UPI00164BF06B	54.3	0.00000127	helix-turn-helix transcriptional regulator	N/A
COG	UHGV-0177284_9	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
UniRef90	UHGV-0177284_13	UniRef90_A0A6G0G303	154.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0177284_13	742727.HMPREF9447_04898	90.9	4.73e-23	Helix-turn-helix domain	N/A
Pfam	UHGV-0177284_13	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-0177284_13	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0177284_14	phrog_30054	51.3	0.000000000000023	N/A	unknown function
eggNOG-mapper	UHGV-0177284_14	1121101.HMPREF1532_02565	61.6	0.0000000000277	N/A	N/A
UniRef90	UHGV-0177284_15	UniRef90_A0A098GES5	100.0	1.74e-25	Putative phage associated protein	N/A
structural_annotation	UHGV-0177284_15	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0177284_16	563031.HMPREF0666_01114	55.5	0.000000694	N/A	N/A
structural_annotation	UHGV-0177284_17	PF18350,MF_01354,TIGR00739,COG1862	N/A	N/A	N/A	N/A
KOfam	UHGV-0177284_19	K07455	212.7	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0177284_19	phrog_148	229.9	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0177284_19	UniRef90_UPI000E4F9B6E	467.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-0177284_19	1401067.HMPREF0872_03475	272.0	0	Recombinase, phage RecT family	N/A
Pfam	UHGV-0177284_19	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0177284_19	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0177284_19	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0177284_19	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-0177284_20	K01143	43.9	0.0000000000005	exo; exodeoxyribonuclease (lambda-induced) [EC:3.1.11.3]	N/A
PHROG	UHGV-0177284_20	phrog_149	110.6	1.3e-32	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0177284_20	UniRef90_UPI001C378D98	389.0	0	YqaJ viral recombinase family protein	N/A
eggNOG-mapper	UHGV-0177284_20	1121100.JCM6294_520	180.0	0	YqaJ-like viral recombinase domain	N/A
Pfam	UHGV-0177284_20	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
structural_annotation	UHGV-0177284_20	TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0177284_21	phrog_36980	52.1	0.000000000000013	N/A	unknown function
eggNOG-mapper	UHGV-0177284_21	1268240.ATFI01000008_gene2556	118.0	3.69e-33	N/A	N/A
PHROG	UHGV-0177284_23	phrog_19572	55.9	9.3e-16	N/A	unknown function
UniRef90	UHGV-0177284_23	UniRef90_A0A7K0JAI7	236.0	0	N/A	N/A
eggNOG-mapper	UHGV-0177284_23	411154.GFO_0852	64.3	0.0000000000586	N/A	N/A
Pfam	UHGV-0177284_23	PF14902	N/A	N/A	N/A	DUF4494
structural_annotation	UHGV-0177284_23	PF14902,COG2157	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0177284_25	1121101.HMPREF1532_02570	79.0	6.16e-19	N/A	N/A
PHROG	UHGV-0177284_26	phrog_824	113.6	1.2e-33	N/A	unknown function
UniRef90	UHGV-0177284_26	UniRef90_A0A1Q6HQK2	218.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0177284_26	1122931.AUAE01000005_gene3274	103.0	4.51e-27	VRR_NUC	N/A
Pfam	UHGV-0177284_26	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0177284_26	PF08774	N/A	N/A	N/A	N/A
PHROG	UHGV-0177284_27	phrog_16304	115.1	7.7e-34	N/A	unknown function
UniRef90	UHGV-0177284_27	UniRef90_UPI001F00F70B	461.0	0	N/A	N/A
eggNOG-mapper	UHGV-0177284_27	657309.BXY_08680	162.0	0	DnaD domain protein	N/A
Pfam	UHGV-0177284_27	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0177284_27	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0177284_27	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0177284_28	phrog_29547	89.7	3.4e-26	N/A	unknown function
UniRef90	UHGV-0177284_28	UniRef90_A0A6L5XC99	90.5	6.47e-19	HTH araC/xylS-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0177284_28	1122985.HMPREF1991_02244	104.0	3.72e-25	N/A	N/A
Pfam	UHGV-0177284_28	PF20338	N/A	N/A	N/A	DUF6633
structural_annotation	UHGV-0177284_28	PF20338	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0177284_33	PF20020	N/A	N/A	N/A	N/A
UniRef90	UHGV-0177284_34	UniRef90_A0A413XHU2	162.0	0	N/A	N/A
eggNOG-mapper	UHGV-0177284_34	411901.BACCAC_01195	81.6	2.94e-17	N/A	N/A
eggNOG-mapper	UHGV-0177284_36	1121100.JCM6294_541	89.7	1.72e-22	N/A	N/A
KOfam	UHGV-0177284_37	K08073	63.6	1.9e-18	PNKP; bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]	N/A
UniRef90	UHGV-0177284_37	UniRef90_UPI001C02227F	213.0	0	HAD-IIIA family hydrolase	N/A
eggNOG-mapper	UHGV-0177284_37	4924.XP_001384287.2	63.2	0.000000000925	Polynucleotide kinase 3 phosphatase	N/A
Pfam	UHGV-0177284_37	PF08645	N/A	N/A	Polynucleotide kinase 3 phosphatase	PNK3P
NCBIFam	UHGV-0177284_37	TIGR01662.1	N/A	N/A	HAD-IIIA family hydrolase	N/A
COG	UHGV-0177284_37	COG0241	N/A	N/A	Histidinol phosphatase/D-glycero-mannoheptose bisphosphatephosphatase, HAD superfamily	N/A
structural_annotation	UHGV-0177284_37	PF08645,MF_01022,TIGR01664,COG0241	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0177284_40	PF16546	N/A	N/A	N/A	N/A
PHROG	UHGV-0177284_42	phrog_28300	50.7	0.000000000000026	N/A	unknown function
structural_annotation	UHGV-0177284_42	PF13066,COG4014	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0177284_44	411901.BACCAC_01173	124.0	3.4e-34	N/A	N/A
PHROG	UHGV-0177284_48	phrog_12005	71.5	1.3e-20	N/A	unknown function
PHROG	UHGV-0177284_49	phrog_874	103.9	1.3e-30	N/A	unknown function
eggNOG-mapper	UHGV-0177284_49	1121098.HMPREF1534_01095	330.0	0	N/A	N/A
structural_annotation	UHGV-0177284_49	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0177284_51	536233.CLO_0512	118.0	3.38e-31	N/A	N/A
UniRef90	UHGV-0177284_54	UniRef90_A0A415IS58	139.0	8.34e-40	LacI family DNA-binding transcriptional regulator	N/A
Pfam	UHGV-0177284_54	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
structural_annotation	UHGV-0177284_54	PF13384,TIGR04381	N/A	N/A	N/A	N/A
PHROG	UHGV-0177284_56	phrog_9226	167.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0177284_56	13689.BV96_04591	94.7	3.56e-20	N/A	N/A
PHROG	UHGV-0177284_57	phrog_38431	257.1	0	N/A	unknown function
UniRef90	UHGV-0177284_57	UniRef90_F3QSP5	235.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0177284_57	762982.HMPREF9442_01205	235.0	0	N/A	N/A
PHROG	UHGV-0177284_58	phrog_34053	118.1	1e-35	N/A	unknown function
PHROG	UHGV-0177284_59	phrog_28898	256.2	0	N/A	unknown function
UniRef90	UHGV-0177284_59	UniRef90_R5UN07	345.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0177284_59	762982.HMPREF9442_01203	220.0	0	N/A	N/A
structural_annotation	UHGV-0177284_59	PF10781	N/A	N/A	N/A	N/A
PHROG	UHGV-0177284_60	phrog_31654	283.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0177284_60	762968.HMPREF9441_00554	249.0	0	N/A	N/A
PHROG	UHGV-0177284_61	phrog_16490	280.4	0	N/A	unknown function
UniRef90	UHGV-0177284_61	UniRef90_A0A7M1RSH1	255.0	0	Outer capsid protein/viral fiber	N/A
eggNOG-mapper	UHGV-0177284_61	762982.HMPREF9442_01201	369.0	0	N/A	N/A
UniRef90	UHGV-0177284_62	UniRef90_A0A8D9UI10	122.0	3.51e-34	Chromosomal replication initiator protein	N/A
eggNOG-mapper	UHGV-0177284_62	762982.HMPREF9442_01200	107.0	2.53e-29	Bacterial dnaA protein helix-turn-helix	N/A
structural_annotation	UHGV-0177284_62	PF08299,NF004688	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0177284_64	762982.HMPREF9442_01199	109.0	2.01e-28	N/A	N/A
PHROG	UHGV-0177284_65	phrog_873	124.4	8.9e-37	endolysin	head and packaging
UniRef90	UHGV-0177284_65	UniRef90_A0A5C6LF67	228.0	0	Structural protein P5	N/A
eggNOG-mapper	UHGV-0177284_65	272559.BF9343_2198	226.0	0	N/A	N/A
UniRef90	UHGV-0177284_66	UniRef90_UPI001105E37C	253.0	0	DNA replication initiation control protein YabA	N/A
eggNOG-mapper	UHGV-0177284_66	1121101.HMPREF1532_02613	155.0	0	N/A	N/A
KOfam	UHGV-0177284_67	K14060	154.6	0	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0177284_67	phrog_125	140.7	6.7963e-43	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0177284_67	UniRef90_UPI001106D619	634.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0177284_67	762984.HMPREF9445_02503	243.0	0	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-0177284_67	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
NCBIFam	UHGV-0177284_67	NF009949.0	N/A	N/A	master DNA invertase Mpi family serine-type recombinase	N/A
COG	UHGV-0177284_67	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A