UHGV-0177484 (vOTU-046624)

Viral Genome: UHGV-0177484

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0177484
vOTU ID	vOTU-046624
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_593249
Associated Biosample	SAMN09781784
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	12
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9759
Viral Hallmark Genes (geNomad)	3
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	14.32
Jumbo Phage?	No

Genome Content
Length (bps)	38,963
GC Content	56.69%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	60
CDS Density	90%
Average CDS Length (bps)	584.40
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0177484_1	K07741	88.2	2.3e-25	antB; anti-repressor protein	N/A
PHROG	UHGV-0177484_1	phrog_5817	82.7	6.4e-24	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0177484_1	UniRef90_A0A1C6BD43	116.0	2.45e-32	Phage anti-repressor protein	N/A
eggNOG-mapper	UHGV-0177484_1	1123263.AUKY01000076_gene1778	138.0	5.96999e-40	Phage antirepressor protein	N/A
Pfam	UHGV-0177484_1	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
COG	UHGV-0177484_1	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0177484_1	PF08346,TIGR02681,COG3561	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0177484_3	1378168.N510_01712	49.7	0.00000547	N/A	N/A
Pfam	UHGV-0177484_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
KOfam	UHGV-0177484_4	K07727	44.5	0.0000000000039	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-0177484_4	UniRef90_A0A1Y3XM94	76.3	0.00000000000000755	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0177484_4	742738.HMPREF9460_02485	56.6	0.000000023	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0177484_4	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0177484_4	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
KOfam	UHGV-0177484_6	K14059	182.4	0	int; integrase	N/A
PHROG	UHGV-0177484_6	phrog_1	184.2	0	integrase	integration and excision
UniRef90	UHGV-0177484_6	UniRef90_A0A4D7AYG4	521.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0177484_6	693746.OBV_01970	405.0	0	Phage integrase family	N/A
Pfam	UHGV-0177484_6	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0177484_6	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0177484_6	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0177484_7	PF17917	N/A	N/A	N/A	N/A
PHROG	UHGV-0177484_10	phrog_374	205.1	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0177484_10	500635.MITSMUL_03105	188.0	0	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	N/A
AcrCatalog	UHGV-0177484_10	cluster_5564	57.8	0.00000000000168	NA	N/A
COG	UHGV-0177484_10	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
PHROG	UHGV-0177484_11	phrog_15863	154.5	0	N/A	unknown function
UniRef90	UHGV-0177484_11	UniRef90_K1RTM4	332.0	0	DnaJ domain protein	N/A
eggNOG-mapper	UHGV-0177484_11	471855.Shel_20200	151.0	1.26117e-44	Heat shock protein DnaJ domain protein	N/A
Pfam	UHGV-0177484_11	PF00226	N/A	N/A	DnaJ domain	DnaJ
COG	UHGV-0177484_11	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
eggNOG-mapper	UHGV-0177484_13	693746.OBV_01760	102.0	4.02e-28	N/A	N/A
eggNOG-mapper	UHGV-0177484_15	693746.OBV_01750	107.0	1.47e-27	N/A	N/A
eggNOG-mapper	UHGV-0177484_17	1519439.JPJG01000011_gene57	133.0	5.72e-38	N/A	N/A
structural_annotation	UHGV-0177484_17	PF11650	N/A	N/A	N/A	N/A
UniRef90	UHGV-0177484_18	UniRef90_A0A4D7B2L2	60.8	0.0000000000611	Cysteine-rich KTR domain-containing protein	N/A
Pfam	UHGV-0177484_18	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
structural_annotation	UHGV-0177484_18	PF14205,COG4416	N/A	N/A	N/A	N/A
PHROG	UHGV-0177484_19	phrog_872	127.0	5.19999e-40	N/A	unknown function
UniRef90	UHGV-0177484_19	UniRef90_A0A8J6M9F5	199.0	0	N/A	N/A
eggNOG-mapper	UHGV-0177484_19	1519439.JPJG01000060_gene1880	142.0	2.59001e-40	N/A	N/A
Pfam	UHGV-0177484_19	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-0177484_19	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-0177484_19	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-0177484_21	phrog_422	129.7	2.1e-38	major head protein	head and packaging
UniRef90	UHGV-0177484_21	UniRef90_K1TJJ5	433.0	0	Gp7 (Fragment)	N/A
eggNOG-mapper	UHGV-0177484_21	693746.OBV_01700	556.0	0	N/A	N/A
Pfam	UHGV-0177484_21	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
structural_annotation	UHGV-0177484_21	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0177484_22	K06909	141.7	6.19934e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0177484_22	phrog_979	146.4	1.12104e-44	terminase large subunit	head and packaging
UniRef90	UHGV-0177484_22	UniRef90_K1SF61	773.0	0	Terminase-like protein (Fragment)	N/A
eggNOG-mapper	UHGV-0177484_22	693746.OBV_01690	693.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-0177484_22	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0177484_22	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0177484_22	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0177484_23	UniRef90_A0A4D7ASB8	786.0	0	N/A	N/A
eggNOG-mapper	UHGV-0177484_23	693746.OBV_01680	730.0	0	N/A	N/A
structural_annotation	UHGV-0177484_23	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
PHROG	UHGV-0177484_24	phrog_156	76.4	6.8e-34	portal protein	head and packaging
eggNOG-mapper	UHGV-0177484_24	693746.OBV_01670	781.0	0	N/A	N/A
structural_annotation	UHGV-0177484_24	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0177484_25	1226322.HMPREF1545_00064	68.2	0.00000000334	N/A	N/A
PHROG	UHGV-0177484_27	phrog_199	88.7	6.2e-26	holin	lysis
UniRef90	UHGV-0177484_27	UniRef90_K1UL76	291.0	0	Holin, toxin secretion/phage lysis	N/A
eggNOG-mapper	UHGV-0177484_27	411467.BACCAP_00280	140.0	7.62993e-41	Bacteriophage holin family	N/A
Pfam	UHGV-0177484_27	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0177484_27	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0177484_27	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0177484_27	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0177484_28	K08640	91.9	7.1e-27	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0177484_28	phrog_18955	155.1	0	N/A	unknown function
UniRef90	UHGV-0177484_28	UniRef90_UPI001C035E39	598.0	0	D-Ala-D-Ala carboxypeptidase family metallohydrolase	N/A
eggNOG-mapper	UHGV-0177484_28	1235797.C816_04171	328.0	0	Peptidase M15	N/A
Pfam	UHGV-0177484_28	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
Pfam	UHGV-0177484_28	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0177484_28	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0177484_28	PF09992,PF08291,COG4632,COG3108	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0177484_29	693746.OBV_01600	158.0	2.72e-39	N/A	N/A
UniRef90	UHGV-0177484_30	UniRef90_A0A2U1CD16	330.0	0	PBECR3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0177484_30	1519439.JPJG01000011_gene53	914.0	0	N/A	N/A
Pfam	UHGV-0177484_30	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
KOfam	UHGV-0177484_31	K07741	66.2	1.1e-18	antB; anti-repressor protein	N/A
PHROG	UHGV-0177484_31	phrog_130	222.4	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0177484_31	UniRef90_A0A396LJD2	311.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-0177484_31	445971.ANASTE_00714	230.0	0	BRO family, N-terminal domain	N/A
Pfam	UHGV-0177484_31	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0177484_31	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0177484_31	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0177484_31	PF02498,PF03374,TIGR02681,COG3617	N/A	N/A	N/A	N/A
UniRef90	UHGV-0177484_37	UniRef90_UPI001C037734	72.0	0.00000000000000334	LuxR C-terminal-related transcriptional regulator	N/A
structural_annotation	UHGV-0177484_37	PF04545,MF_00245,NF001067,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-0177484_38	K02647	44.0	0.0000000000026	cdaR; carbohydrate diacid regulator	N/A
UniRef90	UHGV-0177484_38	UniRef90_K1SN71	121.0	8.22e-35	HTH_30 domain-containing protein	N/A
eggNOG-mapper	UHGV-0177484_38	1122917.KB899661_gene912	55.1	0.0000000575	Putative sugar diacid recognition	N/A
Pfam	UHGV-0177484_38	PF13556	N/A	N/A	PucR C-terminal helix-turn-helix domain	HTH_30
COG	UHGV-0177484_38	COG3835	N/A	N/A	Sugar diacid utilization regulator CdaR	N/A
structural_annotation	UHGV-0177484_38	PF13556,TIGR00637,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-0177484_40	phrog_3136	132.8	1.3e-39	N/A	unknown function
UniRef90	UHGV-0177484_40	UniRef90_UPI001CBCD733	121.0	2.62e-31	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0177484_40	394503.Ccel_3165	57.4	0.0000000429	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-0177484_40	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0177484_40	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0177484_42	phrog_15198	43.3	0.0000000000061	N/A	unknown function
UniRef90	UHGV-0177484_42	UniRef90_A0A3A6ECV8	110.0	5.49e-29	N/A	N/A
eggNOG-mapper	UHGV-0177484_42	411470.RUMGNA_00214	70.9	0.000000000000253	N/A	N/A
Pfam	UHGV-0177484_42	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0177484_43	phrog_954	199.5	0	DNA methyltransferase	other
UniRef90	UHGV-0177484_43	UniRef90_A0A810Q0N4	317.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0177484_43	1280698.AUJS01000007_gene1028	277.0	0	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA	N/A
PADLOC	UHGV-0177484_43	MTase_II_00074	210.4	0	Type II methyltransferase	RM
Pfam	UHGV-0177484_43	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-0177484_43	COG1092	N/A	N/A	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	N/A
structural_annotation	UHGV-0177484_43	PF05148,MF_03044,NF033398,COG1041	N/A	N/A	N/A	N/A
KOfam	UHGV-0177484_44	K17398	80.8	6.9e-35	DNMT3A; DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]	N/A
PHROG	UHGV-0177484_44	phrog_116	66.1	1.5e-29	DNA methyltransferase	other
UniRef90	UHGV-0177484_44	UniRef90_A0A1Q6RQI3	384.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0177484_44	1235797.C816_01614	287.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
Pfam	UHGV-0177484_44	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0177484_44	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0177484_44	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0177484_46	K01160	62.8	1e-17	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0177484_46	phrog_140	113.1	2.3e-33	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0177484_46	UniRef90_K1T7H8	121.0	2.01e-33	Endodeoxyribonuclease RusA family protein	N/A
eggNOG-mapper	UHGV-0177484_46	1095750.HMPREF9970_1673	94.7	5e-23	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0177484_46	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0177484_46	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0177484_46	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0177484_50	PF11417	N/A	N/A	N/A	N/A
UniRef90	UHGV-0177484_51	UniRef90_A0A4D7AYE9	100.0	1.61e-24	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0177484_51	PF00436	N/A	N/A	Single-strand binding protein family	SSB
structural_annotation	UHGV-0177484_51	PF00436,MF_00984,TIGR04418,COG2965	N/A	N/A	N/A	N/A
PHROG	UHGV-0177484_52	phrog_10048	53.3	1.1e-26	N/A	unknown function
eggNOG-mapper	UHGV-0177484_52	1111134.HMPREF1253_1200	107.0	1.99e-25	N/A	N/A
structural_annotation	UHGV-0177484_52	PF04404,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0177484_53	phrog_298	73.9	1.5e-22	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0177484_53	UniRef90_UPI00058C5410	90.9	2.31e-19	PD-(D/E)XK nuclease family protein	N/A
eggNOG-mapper	UHGV-0177484_53	640132.Srot_0032	56.2	0.000000617	Belongs to the helicase family. UvrD subfamily	N/A
COG	UHGV-0177484_53	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0177484_53	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0177484_55	PF14354,TIGR03655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0177484_58	PF18359,COG4466	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0177484_59	PF12728	N/A	N/A	N/A	N/A
KOfam	UHGV-0177484_60	K07741	112.4	1e-32	antB; anti-repressor protein	N/A
PHROG	UHGV-0177484_60	phrog_9438	142.5	7.10458e-43	anti-repressor	transcription regulation
UniRef90	UHGV-0177484_60	UniRef90_A0A7I8D1Y4	227.0	0	Putative P1-type antirepressor - phage associated	N/A
eggNOG-mapper	UHGV-0177484_60	768726.HMPREF9178_1088	214.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-0177484_60	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0177484_60	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0177484_60	PF03374,COG3645,COG3561	N/A	N/A	N/A	N/A