UHGV-0177525 (vOTU-019759)

Viral Genome: UHGV-0177525

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0177525
vOTU ID	vOTU-019759
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_578518
Associated Biosample	SAMN07501037
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	80.27 (Medium-quality)
Trimmed?	Yes
CheckV Viral Markers	30
CheckV Host Markers	3
Recoded?	No

Viral Content
geNomad score	0.9734
Viral Hallmark Genes (geNomad)	8
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	35.05
Jumbo Phage?	No

Genome Content
Length (bps)	33,610
GC Content	61.95%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	52
CDS Density	91%
Average CDS Length (bps)	588.87
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 80.27)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0177525_1	phrog_27144	403.3	0	N/A	unknown function
UniRef90	UHGV-0177525_1	UniRef90_A0A0U4JXA0	110.0	6.53e-28	Tail fibers protein	N/A
eggNOG-mapper	UHGV-0177525_1	287.DR97_4266	107.0	2.41e-27	N/A	N/A
PHROG	UHGV-0177525_2	phrog_5842	879.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0177525_2	287.DR97_4265	660.0	0	N/A	N/A
PHROG	UHGV-0177525_3	phrog_5314	263.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0177525_3	1196835.A458_06955	163.0	0	N/A	N/A
PHROG	UHGV-0177525_4	phrog_339	232.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0177525_4	UniRef90_A0A0U3TH20	1258.0	0	Tail protein	N/A
eggNOG-mapper	UHGV-0177525_4	1301098.PKB_1287	541.0	0	tape measure protein	N/A
Pfam	UHGV-0177525_4	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0177525_4	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0177525_4	COG5281	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-0177525_5	phrog_18719	128.8	1.1e-38	N/A	unknown function
PHROG	UHGV-0177525_6	phrog_1442	89.0	5e-26	tail assembly chaperone	tail
PHROG	UHGV-0177525_7	phrog_807	184.0	0	major tail protein with Ig-like domain	tail
eggNOG-mapper	UHGV-0177525_7	399739.Pmen_3965	401.0	0	N/A	N/A
PHROG	UHGV-0177525_8	phrog_5185	173.6	0	N/A	unknown function
PHROG	UHGV-0177525_9	phrog_27	42.4	0.000000000013	tail completion or Neck1 protein	connector
UniRef90	UHGV-0177525_9	UniRef90_UPI001F2FD522	206.0	0	glycogen/starch/alpha-glucan phosphorylase	N/A
PHROG	UHGV-0177525_10	phrog_12637	362.9	0	N/A	unknown function
UniRef90	UHGV-0177525_10	UniRef90_UPI001F2E63C5	169.0	0	head-tail adaptor protein	N/A
PHROG	UHGV-0177525_11	phrog_40	64.3	1.5e-18	head-tail adaptor Ad1	connector
UniRef90	UHGV-0177525_11	UniRef90_A0A0U4JEH2	209.0	0	Head-tail connector family protein	N/A
eggNOG-mapper	UHGV-0177525_11	1196835.A458_06915	123.0	3.34e-35	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0177525_11	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0177525_11	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0177525_11	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0177525_12	phrog_2616	49.6	0.000000000000089	N/A	unknown function
PHROG	UHGV-0177525_13	phrog_2616	62.7	7.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-0177525_13	1395516.PMO01_04970	48.9	0.000000867	N/A	N/A
structural_annotation	UHGV-0177525_13	PF01281	N/A	N/A	N/A	N/A
PHROG	UHGV-0177525_14	phrog_10	233.8	0	major head protein	head and packaging
UniRef90	UHGV-0177525_14	UniRef90_A0A0U4JIW8	760.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-0177525_14	69328.PVLB_09125	661.0	0	capsid protein	N/A
Pfam	UHGV-0177525_14	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0177525_14	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0177525_14	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0177525_14	PF05065,MF_04113,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0177525_15	K01358	132.1	6.1e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0177525_15	phrog_1684	402.8	0	head maturation protease	head and packaging
UniRef90	UHGV-0177525_15	UniRef90_A0A8G4EFJ1	550.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0177525_15	69328.PVLB_09120	409.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0177525_15	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0177525_15	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0177525_15	PF00574,MF_00444,NF011089,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0177525_16	phrog_12	347.9	0	portal protein	head and packaging
UniRef90	UHGV-0177525_16	UniRef90_A0A3S6RNH7	912.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0177525_16	69328.PVLB_09115	776.0	0	portal protein	N/A
Pfam	UHGV-0177525_16	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0177525_16	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0177525_16	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0177525_16	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0177525_17	phrog_9	386.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0177525_17	UniRef90_A0A0U4B0M7	1187.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0177525_17	243924.LT42_17145	964.0	0	terminase	N/A
Pfam	UHGV-0177525_17	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0177525_17	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0177525_17	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0177525_17	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0177525_18	phrog_83	65.2	6.5e-21	terminase small subunit	head and packaging
UniRef90	UHGV-0177525_18	UniRef90_A0A8G7PCJ8	271.0	0	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0177525_18	243924.LT42_17150	213.0	0	phage terminase small subunit	N/A
Pfam	UHGV-0177525_18	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0177525_18	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
KOfam	UHGV-0177525_19	K07451	41.9	0.000000000018	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0177525_19	phrog_144	104.0	1.2e-30	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0177525_19	UniRef90_A0A0U4B0J6	290.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0177525_19	1033743.CAES01000104_gene3504	53.1	0.000000389	HNH nucleases	N/A
Pfam	UHGV-0177525_19	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0177525_19	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0177525_19	PF01844,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-0177525_20	phrog_89	94.8	8e-28	Rz-like spanin	lysis
UniRef90	UHGV-0177525_20	UniRef90_A0A3S6RQB0	221.0	0	LysB family lysis regulatory protein	N/A
eggNOG-mapper	UHGV-0177525_20	399739.Pmen_3950	99.0	2.64e-24	N/A	N/A
KOfam	UHGV-0177525_21	K03791	243.1	0	K03791; putative chitinase	N/A
PHROG	UHGV-0177525_21	phrog_181	276.6	0	endolysin	lysis
UniRef90	UHGV-0177525_21	UniRef90_A0A509J9Z7	379.0	0	Glycoside hydrolase family 19	N/A
eggNOG-mapper	UHGV-0177525_21	287.DR97_4248	392.0	0	Chitinase class I	N/A
COG	UHGV-0177525_21	COG3179	N/A	N/A	Chitinase, GH19 family	N/A
structural_annotation	UHGV-0177525_21	PF00182,TIGR02282,COG3179	N/A	N/A	N/A	N/A
PHROG	UHGV-0177525_22	phrog_126	127.4	3.9e-38	holin/anti-holin	lysis
UniRef90	UHGV-0177525_22	UniRef90_K7SFJ8	190.0	0	Phage holin	N/A
eggNOG-mapper	UHGV-0177525_22	287.DR97_4247	188.0	0	Phage holin family (Lysis protein S)	N/A
Pfam	UHGV-0177525_22	PF05106	N/A	N/A	Phage holin family (Lysis protein S)	Phage_holin_3_1
NCBIFam	UHGV-0177525_22	TIGR01594.1	N/A	N/A	phage holin, lambda family	N/A
structural_annotation	UHGV-0177525_22	PF05106,TIGR01594	N/A	N/A	N/A	N/A
PHROG	UHGV-0177525_23	phrog_3412	296.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0177525_23	220664.PFL_3772	232.0	0	N/A	N/A
PHROG	UHGV-0177525_24	phrog_5085	126.3	1.2e-37	N/A	unknown function
eggNOG-mapper	UHGV-0177525_24	1112217.PPL19_05240	70.9	0.0000000000000104	Prophage PssSM-03	N/A
PHROG	UHGV-0177525_25	phrog_171	239.7	0	NinG/ Rap DNA junction specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0177525_25	UniRef90_A0A0U4KL68	380.0	0	Protein ninG	N/A
eggNOG-mapper	UHGV-0177525_25	287.DR97_4244	376.0	0	Bacteriophage Lambda NinG protein	N/A
Pfam	UHGV-0177525_25	PF05766	N/A	N/A	Bacteriophage Lambda NinG protein	NinG
COG	UHGV-0177525_25	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0177525_25	PF05766	N/A	N/A	N/A	N/A
PHROG	UHGV-0177525_26	phrog_17150	147.8	1.68156e-44	N/A	unknown function
UniRef90	UHGV-0177525_26	UniRef90_A0A8G7NMJ6	143.0	1.87774e-43	NinG protein	N/A
PHROG	UHGV-0177525_27	phrog_109	162.8	0	P-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0177525_27	UniRef90_A0A0U4ISJ0	354.0	0	Replication P family protein	N/A
eggNOG-mapper	UHGV-0177525_27	287.DR97_4242	436.0	0	Replication protein P	N/A
Pfam	UHGV-0177525_27	PF06992	N/A	N/A	Replication protein P	Phage_lambda_P
structural_annotation	UHGV-0177525_27	PF06992	N/A	N/A	N/A	N/A
PHROG	UHGV-0177525_28	phrog_391	142.6	0	replication initiation O-like	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0177525_28	UniRef90_UPI000F52457C	385.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0177525_28	287.DR97_4241	325.0	0	DNA-binding transcription factor activity	N/A
Pfam	UHGV-0177525_28	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0177525_28	COG0640	N/A	N/A	DNA-binding transcriptional regulator, ArsR family	N/A
KOfam	UHGV-0177525_29	K07741	44.8	0.0000000000037	antB; anti-repressor protein	N/A
PHROG	UHGV-0177525_29	phrog_63	187.4	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0177525_29	UniRef90_A0A1B0YZY9	442.0	0	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0177525_29	1226994.AMZB01000059_gene3598	293.0	0	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-0177525_29	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-0177525_29	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0177525_29	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
structural_annotation	UHGV-0177525_29	PF03374,PF09669,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-0177525_30	phrog_10248	76.6	4.5e-22	N/A	unknown function
UniRef90	UHGV-0177525_30	UniRef90_UPI001E6370CF	91.7	2.4e-22	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0177525_30	549.BW31_01401	65.1	0.000000000000637	sequence-specific DNA binding	N/A
COG	UHGV-0177525_30	COG4197	N/A	N/A	DNA-binding transcriptional regulator YdaS, prophage-encoded, Cro superfamily	N/A
KOfam	UHGV-0177525_31	K01356	52.8	0.0000000000000095	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0177525_31	phrog_4	131.7	6.5e-39	transcriptional repressor	transcription regulation
UniRef90	UHGV-0177525_31	UniRef90_A0A2C9WXH1	494.0	0	Peptidase_S24 domain-containing protein	N/A
eggNOG-mapper	UHGV-0177525_31	280701.Q5QF80_9CAUD	283.0	0	Peptidase S24-like	N/A
Pfam	UHGV-0177525_31	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
PHROG	UHGV-0177525_32	phrog_8887	114.5	2.7e-34	toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0177525_32	UniRef90_A0A8G2U5R6	170.0	0	Type II toxin-antitoxin system HicA family toxin	N/A
eggNOG-mapper	UHGV-0177525_32	233412.HD_0911	72.8	7.39e-16	HicA toxin of bacterial toxin-antitoxin,	N/A
Pfam	UHGV-0177525_32	PF07927	N/A	N/A	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
structural_annotation	UHGV-0177525_32	COG1724	N/A	N/A	N/A	N/A
PHROG	UHGV-0177525_33	phrog_9151	162.3	0	HicB-like antitoxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0177525_33	UniRef90_A0A8G2WYJ8	248.0	0	Type II toxin-antitoxin system HicB family antitoxin	N/A
eggNOG-mapper	UHGV-0177525_33	1046627.BZARG_205	103.0	1.04e-26	protein encoded in hypervariable junctions of pilus gene clusters	N/A
Pfam	UHGV-0177525_33	PF05534	N/A	N/A	HicB family	HicB
COG	UHGV-0177525_33	COG4226	N/A	N/A	Predicted nuclease of the RNAse H fold, HicB family	N/A
PHROG	UHGV-0177525_35	phrog_2707	119.0	1.1e-35	N/A	unknown function
UniRef90	UHGV-0177525_35	UniRef90_UPI0003BB526E	164.0	0	N/A	N/A
eggNOG-mapper	UHGV-0177525_35	1388763.O165_010825	92.0	2.49e-23	N/A	N/A
Pfam	UHGV-0177525_35	PF07867	N/A	N/A	N/A	DUF1654
KOfam	UHGV-0177525_37	K05840	45.8	0.00000000000065	DRD5; dopamine receptor D5	N/A
PHROG	UHGV-0177525_37	phrog_18079	350.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0177525_37	194699.Q775A9_BPBPP	161.0	5.60519e-45	N/A	N/A
AcrCatalog	UHGV-0177525_37	cluster_5158	280.0	0	NA	N/A
Pfam	UHGV-0177525_37	PF15999	N/A	N/A	N/A	DUF4774
KOfam	UHGV-0177525_38	K03497	80.4	3.8e-23	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0177525_38	phrog_1033	295.0	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0177525_38	UniRef90_UPI000E313115	548.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0177525_38	287.DR97_4233	557.0	0	DNA binding	N/A
Pfam	UHGV-0177525_38	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0177525_38	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
KOfam	UHGV-0177525_39	K18098	48.3	0.00000000000016	bjaR1, rpaR, rhiR; LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1	N/A
PHROG	UHGV-0177525_39	phrog_3282	158.5	0	sigma factor	transcription regulation
UniRef90	UHGV-0177525_39	UniRef90_B3G1P8	236.0	0	HTH luxR-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0177525_39	287.DR97_4232	232.0	0	helix_turn_helix, Lux Regulon	N/A
Pfam	UHGV-0177525_39	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
PHROG	UHGV-0177525_40	phrog_6742	111.8	2.6e-33	N/A	unknown function
eggNOG-mapper	UHGV-0177525_40	287.DR97_4231	144.0	4.2039e-44	N/A	N/A
PHROG	UHGV-0177525_41	phrog_3007	141.0	6.60012e-42	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0177525_41	UniRef90_A0A2C9WXI1	445.0	0	DNA_pol3_beta_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0177525_41	95619.PM1_0217535	128.0	1.04e-33	DNA-directed DNA polymerase activity	N/A
COG	UHGV-0177525_41	COG0592	N/A	N/A	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	N/A
structural_annotation	UHGV-0177525_41	PF02767,MF_00317,TIGR00663,COG0592	N/A	N/A	N/A	N/A
PHROG	UHGV-0177525_42	phrog_5439	110.8	7.8e-33	N/A	unknown function
PHROG	UHGV-0177525_43	phrog_20424	249.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0177525_43	237609.PSAKL28_18840	96.7	4.48e-24	N/A	N/A
PHROG	UHGV-0177525_44	phrog_5781	217.6	0	N/A	unknown function
UniRef90	UHGV-0177525_44	UniRef90_A0A0U4IBL4	344.0	0	N-(Deoxy)ribosyltransferase-like protein	N/A
eggNOG-mapper	UHGV-0177525_44	287.DR97_4227	338.0	0	N/A	N/A
Pfam	UHGV-0177525_44	PF14359	N/A	N/A	N/A	DUF4406
PHROG	UHGV-0177525_45	phrog_874	247.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0177525_45	1129146.H2BDG4_9CAUD	360.0	0	N/A	N/A
structural_annotation	UHGV-0177525_45	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-0177525_46	phrog_6604	126.7	5.6e-38	N/A	unknown function
eggNOG-mapper	UHGV-0177525_46	287.DR97_4224	150.0	0	N/A	N/A
AcrCatalog	UHGV-0177525_46	cluster_2684	144.0	0	NA	N/A
PHROG	UHGV-0177525_47	phrog_9134	168.7	0	N/A	unknown function
PHROG	UHGV-0177525_48	phrog_9434	125.6	4.2e-38	N/A	unknown function
eggNOG-mapper	UHGV-0177525_48	287.DR97_5362	178.0	0	N/A	N/A
PHROG	UHGV-0177525_49	phrog_13613	162.1	0	N/A	unknown function
PHROG	UHGV-0177525_50	phrog_3592	148.6	3.08286e-44	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0177525_50	1437882.AZRU01000157_gene4330	87.0	1.63e-17	N/A	N/A
PHROG	UHGV-0177525_51	phrog_2730	75.7	7.6e-22	N/A	unknown function
eggNOG-mapper	UHGV-0177525_51	257310.BB1671	77.0	6.37e-18	N/A	N/A
PHROG	UHGV-0177525_52	phrog_7427	214.7	0	N/A	unknown function