UHGV-0178319 (vOTU-162765)

Viral Genome: UHGV-0178319

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0178319
vOTU ID	vOTU-162765
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_563337
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	88.94 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	16
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9739
Viral Hallmark Genes (geNomad)	8
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	26.5
Jumbo Phage?	No

Genome Content
Length (bps)	33,683
GC Content	29.61%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	58
CDS Density	92%
Average CDS Length (bps)	533.95
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 88.94)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0178319_1	K14059	269.6	0	int; integrase	N/A
PHROG	UHGV-0178319_1	phrog_1	238.8	0	integrase	integration and excision
UniRef90	UHGV-0178319_1	UniRef90_R6HDS7	353.0	0	Phage integrase	N/A
eggNOG-mapper	UHGV-0178319_1	857293.CAAU_0761	276.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0178319_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0178319_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0178319_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0178319_1	PF00589,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0178319_2	K01356	118.4	8.2e-35	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0178319_2	phrog_4	77.4	6.1e-28	transcriptional repressor	transcription regulation
UniRef90	UHGV-0178319_2	UniRef90_R5YSE6	298.0	0	Peptidase_S24 domain-containing protein	N/A
eggNOG-mapper	UHGV-0178319_2	1403313.AXBR01000018_gene3552	105.0	3.61e-24	Peptidase S24-like	N/A
Pfam	UHGV-0178319_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0178319_2	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0178319_2	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0178319_2	PF00717,PF01381,MF_00015,TIGR00498,NF010465,COG1974,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0178319_3	UniRef90_R5ZN14	62.0	0.0000000000347	HTH_8 domain-containing protein	N/A
eggNOG-mapper	UHGV-0178319_3	431943.CKL_2015	57.0	0.000000000754	N/A	N/A
structural_annotation	UHGV-0178319_3	PF05339,NF007271,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0178319_4	K07741	172.8	0	antB; anti-repressor protein	N/A
PHROG	UHGV-0178319_4	phrog_63	138.2	7.69999e-41	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0178319_4	UniRef90_A0A1H8KVS3	323.0	0	Anti-repressor protein	N/A
eggNOG-mapper	UHGV-0178319_4	663952.SDD27957_09340	275.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-0178319_4	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0178319_4	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0178319_4	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0178319_4	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0178319_5	PF21531,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-0178319_9	phrog_253	105.1	7.6e-31	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178319_9	UniRef90_UPI000368F966	84.3	1.65e-17	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0178319_9	1296659.S5M9S4_9CAUD	72.8	0.0000000000000664	Siphovirus Gp157	N/A
Pfam	UHGV-0178319_9	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0178319_9	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-0178319_10	phrog_155	131.1	9e-39	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178319_10	UniRef90_A0A3D1PJF8	284.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0178319_10	1304866.K413DRAFT_1196	223.0	0	ERF superfamily	N/A
Pfam	UHGV-0178319_10	PF04404	N/A	N/A	ERF superfamily	ERF
COG	UHGV-0178319_10	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0178319_10	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
KOfam	UHGV-0178319_11	K03111	143.4	2.7003e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0178319_11	phrog_44	150.7	8.40779e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178319_11	UniRef90_R6B7C1	192.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0178319_11	509191.AEDB02000052_gene1361	160.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0178319_11	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0178319_11	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0178319_11	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0178319_11	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0178319_11	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0178319_12	phrog_72	65.8	8.1e-19	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0178319_12	445972.ANACOL_00148	63.2	0.000000000272	N/A	N/A
Pfam	UHGV-0178319_12	PF05772	N/A	N/A	NinB protein	NinB
structural_annotation	UHGV-0178319_12	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0178319_13	phrog_7566	60.3	3.5e-17	N/A	unknown function
PHROG	UHGV-0178319_14	phrog_16304	92.1	9.3e-27	N/A	unknown function
UniRef90	UHGV-0178319_14	UniRef90_J1H1U4	73.2	0.0000000000000142	N/A	N/A
eggNOG-mapper	UHGV-0178319_14	445972.ANACOL_03338	75.5	0.0000000000000122	DnaD domain protein	N/A
Pfam	UHGV-0178319_14	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0178319_14	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0178319_14	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0178319_15	phrog_9804	104.8	9.7e-31	N/A	unknown function
UniRef90	UHGV-0178319_15	UniRef90_A0A1I2QMA2	190.0	0	Loader and inhibitor of phage G40P	N/A
eggNOG-mapper	UHGV-0178319_15	1499683.CCFF01000013_gene503	183.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0178319_15	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0178319_15	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0178319_16	phrog_10201	42.3	0.000000000012	N/A	unknown function
PHROG	UHGV-0178319_17	phrog_1123	56.4	5.4e-16	N/A	unknown function
UniRef90	UHGV-0178319_17	UniRef90_A0A7U3NJT7	69.3	0.000000000000656	Putative transcriptional regulator	N/A
eggNOG-mapper	UHGV-0178319_17	445972.ANACOL_03346	65.5	0.00000000000178	N/A	N/A
structural_annotation	UHGV-0178319_17	PF03551,TIGR02719,COG1695	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0178319_18	PF15188	N/A	N/A	N/A	N/A
PHROG	UHGV-0178319_19	phrog_1770	48.8	0.00000000000015	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0178319_19	32057.KB217481_gene8515	132.0	1.05e-37	N/A	N/A
structural_annotation	UHGV-0178319_19	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-0178319_22	phrog_23490	50.5	0.00000000000002	N/A	unknown function
structural_annotation	UHGV-0178319_25	PF15781	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0178319_30	PF05263,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0178319_31	phrog_9529	191.3	0	N/A	unknown function
UniRef90	UHGV-0178319_31	UniRef90_A0A7X7EKG1	174.0	0	N/A	N/A
eggNOG-mapper	UHGV-0178319_31	1122143.AUEG01000001_gene572	172.0	0	N/A	N/A
Pfam	UHGV-0178319_31	PF04480	N/A	N/A	N/A	DUF559
COG	UHGV-0178319_31	COG2852	N/A	N/A	Very-short-patch-repair endonuclease	N/A
structural_annotation	UHGV-0178319_31	PF04480,NF007294,COG2852	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0178319_32	1158614.I592_01795	131.0	1.1e-35	N/A	N/A
PHROG	UHGV-0178319_34	phrog_2412	75.4	8.8e-22	N/A	unknown function
UniRef90	UHGV-0178319_34	UniRef90_A0A150NN47	72.4	0.000000000000169	N/A	N/A
eggNOG-mapper	UHGV-0178319_34	1203554.HMPREF1476_00247	70.5	0.0000000000000697	N/A	N/A
PHROG	UHGV-0178319_35	phrog_30251	614.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0178319_35	UniRef90_R7ITA5	652.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-0178319_35	469618.FVAG_00794	552.0	0	TIGRFAM Phage	N/A
Pfam	UHGV-0178319_35	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0178319_35	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0178319_35	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0178319_35	PF17289,PF03237,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
PHROG	UHGV-0178319_36	phrog_64	196.1	0	portal protein	head and packaging
UniRef90	UHGV-0178319_36	UniRef90_R6I230	405.0	0	SPP1 family phage portal protein	N/A
eggNOG-mapper	UHGV-0178319_36	665956.HMPREF1032_03614	263.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0178319_36	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0178319_36	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
UniRef90	UHGV-0178319_37	UniRef90_R7IWF4	377.0	0	SPP1 gp7 family phage putative head morphogenesis protein	N/A
PHROG	UHGV-0178319_40	phrog_1454	46.0	0.000000000001	N/A	unknown function
PHROG	UHGV-0178319_42	phrog_172	108.0	1.1e-31	head scaffolding protein	head and packaging
UniRef90	UHGV-0178319_42	UniRef90_A0A3D1PKZ2	302.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0178319_42	1235800.C819_00486	99.8	4.87e-23	N/A	N/A
Pfam	UHGV-0178319_42	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0178319_42	PF14265	N/A	N/A	N/A	N/A
UniRef90	UHGV-0178319_43	UniRef90_A0A3D1PN29	679.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0178319_43	86416.Clopa_0341	113.0	6.12e-25	Phage capsid family	N/A
Pfam	UHGV-0178319_43	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
COG	UHGV-0178319_43	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0178319_43	PF05065,PF18316,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0178319_44	PF05135,TIGR01560	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0178319_45	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0178319_46	445972.ANACOL_01849	72.0	0.000000000000249	N/A	N/A
structural_annotation	UHGV-0178319_46	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0178319_47	665956.HMPREF1032_03624	57.8	0.00000000746	N/A	N/A
structural_annotation	UHGV-0178319_47	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0178319_48	445972.ANACOL_01851	104.0	1.58e-26	N/A	N/A
structural_annotation	UHGV-0178319_48	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0178319_49	PF12363	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0178319_51	TIGR04165,COG3478	N/A	N/A	N/A	N/A
PHROG	UHGV-0178319_52	phrog_1535	151.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0178319_52	UniRef90_R6H5W8	701.0	0	Phage-related protein-like protein	N/A
eggNOG-mapper	UHGV-0178319_52	1280692.AUJL01000027_gene2150	78.2	0.00000000000875	phage tail tape measure protein	N/A
COG	UHGV-0178319_52	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0178319_52	PF09486,NF038178,COG1382	N/A	N/A	N/A	N/A
PHROG	UHGV-0178319_54	phrog_1194	50.6	0.000000000000031	N/A	unknown function
PHROG	UHGV-0178319_56	phrog_5668	88.3	1.40004e-41	tail fiber protein	tail
UniRef90	UHGV-0178319_56	UniRef90_R6H354	661.0	0	Carbohydrate binding domain protein	N/A
eggNOG-mapper	UHGV-0178319_56	1232453.BAIF02000059_gene1614	72.4	0.000000000222	N/A	N/A
structural_annotation	UHGV-0178319_56	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0178319_57	phrog_5717	70.2	2.1e-20	tail protein	tail
UniRef90	UHGV-0178319_57	UniRef90_A0A4U8Q6R4	86.7	2.78e-17	Baseplate wedge subunit and tail pin	N/A
eggNOG-mapper	UHGV-0178319_57	1235802.C823_05263	116.0	2.7e-27	N/A	N/A
COG	UHGV-0178319_57	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0178319_57	COG4675	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0178319_58	1540257.JQMW01000009_gene3383	57.8	0.00000316	N/A	N/A
COG	UHGV-0178319_58	COG4722	N/A	N/A	Phage-related protein YomH	N/A