UHGV-0179352 (vOTU-171522)

Viral Genome: UHGV-0179352

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0179352
vOTU ID	vOTU-171522
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_577111
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	72.23 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	23
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9718
Viral Hallmark Genes (geNomad)	7
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	46.16
Jumbo Phage?	No

Genome Content
Length (bps)	28,153
GC Content	30.27%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	48
CDS Density	93%
Average CDS Length (bps)	545.63
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 72.23)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0179352_1	phrog_9680	76.8	2.5e-22	host range and adsorption protein	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0179352_1	1280689.AUJC01000003_gene978	678.0	0	Phage minor structural protein	N/A
COG	UHGV-0179352_1	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0179352_1	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0179352_2	phrog_1194	126.6	1.1e-37	N/A	unknown function
eggNOG-mapper	UHGV-0179352_2	1280689.AUJC01000003_gene977	228.0	0	N/A	N/A
Pfam	UHGV-0179352_2	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0179352_2	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0179352_3	phrog_31409	384.7	0	tail length tape measure protein	tail
UniRef90	UHGV-0179352_3	UniRef90_A0A383RGU3	382.0	0	Putative phage protein	N/A
eggNOG-mapper	UHGV-0179352_3	1280689.AUJC01000003_gene976	1363.0	0	phage tail tape measure protein	N/A
COG	UHGV-0179352_3	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0179352_3	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0179352_4	phrog_2066	47.7	0.00000000000019	N/A	unknown function
eggNOG-mapper	UHGV-0179352_4	1280689.AUJC01000003_gene975	153.0	0	N/A	N/A
PHROG	UHGV-0179352_5	phrog_183	80.2	3.2e-23	tail chaperone protein	tail
UniRef90	UHGV-0179352_5	UniRef90_UPI0006C0E497	222.0	0	N/A	N/A
eggNOG-mapper	UHGV-0179352_5	1280689.AUJC01000003_gene974	238.0	0	N/A	N/A
Pfam	UHGV-0179352_5	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-0179352_5	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0179352_6	phrog_2546	90.9	2.1e-26	N/A	unknown function
eggNOG-mapper	UHGV-0179352_6	1280689.AUJC01000003_gene973	429.0	0	N/A	N/A
PHROG	UHGV-0179352_7	phrog_158	82.0	1.2e-23	major tail protein	tail
UniRef90	UHGV-0179352_7	UniRef90_A0A1B8RSU9	280.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0179352_7	1280689.AUJC01000003_gene972	280.0	0	Phage tail tube protein, TTP	N/A
Pfam	UHGV-0179352_7	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-0179352_7	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0179352_8	phrog_78	62.0	1.2e-17	tail terminator	connector
eggNOG-mapper	UHGV-0179352_8	1280689.AUJC01000003_gene971	236.0	0	N/A	N/A
structural_annotation	UHGV-0179352_8	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0179352_9	phrog_5	111.4	8.7e-33	tail completion or Neck1 protein	connector
UniRef90	UHGV-0179352_9	UniRef90_UPI001B3C7E28	270.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0179352_9	1280689.AUJC01000003_gene970	327.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0179352_9	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0179352_9	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0179352_9	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0179352_10	phrog_2168	133.5	6.8e-40	N/A	unknown function
eggNOG-mapper	UHGV-0179352_10	1280689.AUJC01000003_gene969	209.0	0	N/A	N/A
structural_annotation	UHGV-0179352_10	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0179352_11	phrog_132	88.4	5.8e-26	head-tail adaptor	connector
UniRef90	UHGV-0179352_11	UniRef90_UPI000829FFA7	183.0	0	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0179352_11	1280689.AUJC01000003_gene968	201.0	0	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0179352_11	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0179352_11	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0179352_12	phrog_422	273.2	0	major head protein	head and packaging
UniRef90	UHGV-0179352_12	UniRef90_UPI00189C3164	578.0	0	capsid protein	N/A
eggNOG-mapper	UHGV-0179352_12	1280689.AUJC01000003_gene967	375.0	0	N/A	N/A
structural_annotation	UHGV-0179352_12	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0179352_13	phrog_172	173.7	0	head scaffolding protein	head and packaging
UniRef90	UHGV-0179352_13	UniRef90_UPI00189D679E	305.0	0	N/A	N/A
eggNOG-mapper	UHGV-0179352_13	1280689.AUJC01000003_gene966	325.0	0	N/A	N/A
Pfam	UHGV-0179352_13	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0179352_13	PF14265	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0179352_14	1280689.AUJC01000003_gene965	166.0	0	N/A	N/A
PHROG	UHGV-0179352_15	phrog_115	361.3	0	minor head protein	head and packaging
UniRef90	UHGV-0179352_15	UniRef90_UPI001A9A821E	1020.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0179352_15	1280689.AUJC01000003_gene964	974.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0179352_15	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0179352_15	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0179352_15	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0179352_15	PF15542,PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0179352_16	phrog_64	401.8	0	portal protein	head and packaging
UniRef90	UHGV-0179352_16	UniRef90_UPI000EA0DF01	833.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0179352_16	1280689.AUJC01000003_gene963	858.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0179352_16	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0179352_16	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0179352_16	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0179352_17	K06909	365.4	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0179352_17	phrog_3717	164.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0179352_17	UniRef90_A0A1B8RSV7	855.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0179352_17	1280689.AUJC01000003_gene962	862.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0179352_17	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0179352_17	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0179352_17	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0179352_17	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0179352_17	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0179352_18	K07474	117.0	3.4e-34	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0179352_18	phrog_51	131.4	5e-39	terminase small subunit	head and packaging
UniRef90	UHGV-0179352_18	UniRef90_A0A1B8RT19	246.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0179352_18	1280689.AUJC01000003_gene961	218.0	0	Terminase small subunit	N/A
Pfam	UHGV-0179352_18	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0179352_18	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0179352_18	PF03592,COG3728	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0179352_19	1280689.AUJC01000003_gene960	57.8	0.000000000573	N/A	N/A
structural_annotation	UHGV-0179352_19	PF10922,MF_00839	N/A	N/A	N/A	N/A
PHROG	UHGV-0179352_21	phrog_27456	76.3	2.2e-22	N/A	unknown function
UniRef90	UHGV-0179352_21	UniRef90_UPI0015B50F4A	240.0	0	N/A	N/A
eggNOG-mapper	UHGV-0179352_21	1217648.F933_00523	67.0	0.00000000104	N/A	N/A
Pfam	UHGV-0179352_21	PF18928	N/A	N/A	N/A	DUF5677
PHROG	UHGV-0179352_23	phrog_36	77.1	2.1e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0179352_23	UniRef90_UPI001459BFD6	186.0	0	transcriptional regulator	N/A
eggNOG-mapper	UHGV-0179352_23	1391647.AVSV01000022_gene2550	158.0	0	N/A	N/A
NCBIFam	UHGV-0179352_23	TIGR01636.1	N/A	N/A	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-0179352_23	PF08281,MF_00245,NF001068,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-0179352_24	UniRef90_UPI0018AA8F3E	543.0	0	RES family NAD+ phosphorylase	N/A
Pfam	UHGV-0179352_24	PF08808	N/A	N/A	RES domain	RES
structural_annotation	UHGV-0179352_27	NF009256	N/A	N/A	N/A	N/A
KOfam	UHGV-0179352_29	K03111	141.4	1.10002e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0179352_29	phrog_44	143.6	1.19951e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0179352_29	UniRef90_UPI000C079352	257.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0179352_29	1280689.AUJC01000014_gene1707	211.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0179352_29	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0179352_29	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0179352_29	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0179352_29	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0179352_29	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0179352_30	phrog_244	75.9	7.2e-22	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0179352_30	1280692.AUJL01000025_gene2095	188.0	0	N/A	N/A
structural_annotation	UHGV-0179352_30	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0179352_32	phrog_1389	106.2	2.2e-31	N/A	unknown function
eggNOG-mapper	UHGV-0179352_32	536233.CLO_1823	73.2	0.00000000000000331	N/A	N/A
structural_annotation	UHGV-0179352_32	PF11056,TIGR04376,COG1842	N/A	N/A	N/A	N/A
PHROG	UHGV-0179352_34	phrog_2715	129.7	1.7e-38	N/A	unknown function
UniRef90	UHGV-0179352_34	UniRef90_A0A1B8RSY6	336.0	0	N/A	N/A
eggNOG-mapper	UHGV-0179352_34	642492.Clole_0950	157.0	0	N/A	N/A
Pfam	UHGV-0179352_34	PF18406	N/A	N/A	Ferredoxin-like domain in Api92-like protein	DUF1281_C
structural_annotation	UHGV-0179352_34	PF18406	N/A	N/A	N/A	N/A
PHROG	UHGV-0179352_35	phrog_3497	58.3	4.7e-18	N/A	unknown function
UniRef90	UHGV-0179352_35	UniRef90_UPI001367DC20	164.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0179352_35	1280689.AUJC01000003_gene939	155.0	0	N/A	N/A
structural_annotation	UHGV-0179352_35	COG5126	N/A	N/A	N/A	N/A
KOfam	UHGV-0179352_36	K02086	46.7	0.00000000000031	dnaD; DNA replication protein	N/A
PHROG	UHGV-0179352_36	phrog_2562	240.8	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0179352_36	UniRef90_UPI0018A8E978	476.0	0	N/A	N/A
eggNOG-mapper	UHGV-0179352_36	1280689.AUJC01000003_gene938	538.0	0	N/A	N/A
Pfam	UHGV-0179352_36	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
Pfam	UHGV-0179352_36	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0179352_36	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-0179352_36	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0179352_36	PF14297,TIGR01446,TIGR01714	N/A	N/A	N/A	N/A
PHROG	UHGV-0179352_38	phrog_2324	104.2	1.1e-30	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0179352_38	UniRef90_UPI001897CE81	345.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0179352_38	1415774.U728_771	203.0	0	ERF superfamily	N/A
Pfam	UHGV-0179352_38	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0179352_38	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0179352_44	1196322.A370_05749	58.2	0.000000000147	N/A	N/A
PHROG	UHGV-0179352_45	phrog_7338	49.1	0.0000000000001	N/A	unknown function
UniRef90	UHGV-0179352_45	UniRef90_UPI0006C24032	140.0	8.38957e-42	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0179352_45	931276.Cspa_c26540	92.4	1.04e-23	Excisionase from transposon Tn916	N/A
NCBIFam	UHGV-0179352_45	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-0179352_45	PF09035,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0179352_46	phrog_1726	121.5	9.7e-36	anti-repressor	transcription regulation
UniRef90	UHGV-0179352_46	UniRef90_UPI00164CD76B	375.0	0	ORF6N domain-containing protein	N/A
eggNOG-mapper	UHGV-0179352_46	1444310.JANV01000162_gene1209	273.0	0	ORF6N domain	N/A
Pfam	UHGV-0179352_46	PF10543	N/A	N/A	ORF6N domain	ORF6N
COG	UHGV-0179352_46	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0179352_46	PF10543,TIGR02681,COG3646	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0179352_47	PF11614,NF006325,COG2847	N/A	N/A	N/A	N/A