UHGV-0182028 (vOTU-046740)

Viral Genome: UHGV-0182028

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0182028
vOTU ID	vOTU-046740
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_596185
Associated Biosample	SAMN09781713
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	9
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9824
Viral Hallmark Genes (geNomad)	5
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	21.47
Jumbo Phage?	No

Genome Content
Length (bps)	41,567
GC Content	58.72%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	56
CDS Density	92%
Average CDS Length (bps)	681.43
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0182028_1	K16628	127.4	4.1e-38	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0182028_1	phrog_819	142.0	0	tail protein	tail
eggNOG-mapper	UHGV-0182028_1	1232443.BAIA02000078_gene14	83.6	0.00000000000000607	nuclear chromosome segregation	N/A
Pfam	UHGV-0182028_1	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0182028_1	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0182028_2	PF18962,NF011773	N/A	N/A	N/A	N/A
PHROG	UHGV-0182028_3	phrog_33872	58.9	9.4e-17	N/A	unknown function
eggNOG-mapper	UHGV-0182028_3	693746.OBV_19740	54.7	0.0000000177	N/A	N/A
PHROG	UHGV-0182028_4	phrog_22978	130.6	4.90454e-44	N/A	unknown function
eggNOG-mapper	UHGV-0182028_4	1408437.JNJN01000039_gene389	488.0	0	heme binding	N/A
COG	UHGV-0182028_4	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
UniRef90	UHGV-0182028_5	UniRef90_R5DCX9	189.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0182028_5	1410650.JHWL01000003_gene2815	137.0	7.19e-34	N/A	N/A
PHROG	UHGV-0182028_6	phrog_12105	126.2	1.6e-37	N/A	unknown function
eggNOG-mapper	UHGV-0182028_6	1226322.HMPREF1545_03850	63.9	0.000000000026	N/A	N/A
PHROG	UHGV-0182028_8	phrog_1357	218.3	0	major head protein	head and packaging
UniRef90	UHGV-0182028_8	UniRef90_A0A2V2CFL5	405.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0182028_8	1410650.JHWL01000003_gene2830	276.0	0	N/A	N/A
Pfam	UHGV-0182028_8	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0182028_8	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0182028_8	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0182028_9	phrog_13908	152.6	2.8026e-45	N/A	unknown function
eggNOG-mapper	UHGV-0182028_9	1410650.JHWL01000003_gene2831	103.0	5.11e-23	N/A	N/A
PHROG	UHGV-0182028_10	phrog_156	302.8	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0182028_10	1410650.JHWL01000003_gene2833	538.0	0	N/A	N/A
structural_annotation	UHGV-0182028_10	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0182028_12	phrog_37329	45.3	0.00000000000081	N/A	unknown function
Pfam	UHGV-0182028_12	PF00041	N/A	N/A	Fibronectin type III domain	fn3
COG	UHGV-0182028_12	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0182028_12	PF17744,PF16655,MF_01905,NF038116,COG3979,COG2033	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0182028_13	537007.BLAHAN_05255	60.1	0.000000745	N/A	N/A
PHROG	UHGV-0182028_14	phrog_511	227.5	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0182028_14	1410650.JHWL01000003_gene2827	318.0	0	N/A	N/A
structural_annotation	UHGV-0182028_14	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
KOfam	UHGV-0182028_15	K06909	152.3	4.2039e-45	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0182028_15	phrog_979	137.4	4.79945e-42	terminase large subunit	head and packaging
UniRef90	UHGV-0182028_15	UniRef90_A0A810Q5R0	650.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0182028_15	1410650.JHWL01000003_gene2834	614.0	0	N/A	N/A
Pfam	UHGV-0182028_15	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0182028_15	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0182028_15	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0182028_16	phrog_606	69.3	5.6e-20	terminase small subunit	head and packaging
UniRef90	UHGV-0182028_16	UniRef90_UPI001F487344	126.0	1.38e-34	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0182028_16	397290.C810_05185	129.0	3.49e-36	DNA-packaging protein gp3	N/A
Pfam	UHGV-0182028_16	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
structural_annotation	UHGV-0182028_16	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-0182028_17	phrog_3584	114.6	7.6e-34	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0182028_17	537013.CLOSTMETH_02141	70.1	0.00000000000651	N/A	N/A
structural_annotation	UHGV-0182028_17	PF21578,MF_00360	N/A	N/A	N/A	N/A
PHROG	UHGV-0182028_18	phrog_2245	91.7	7.2e-27	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0182028_18	UniRef90_A0A4U9RLZ8	60.1	0.0000000015	N/A	N/A
eggNOG-mapper	UHGV-0182028_18	1567010.A0A0A7RU90_9VIRU	59.7	0.00000000096	protein disulfide oxidoreductase activity	N/A
PHROG	UHGV-0182028_20	phrog_374	55.4	0.0000000000000012	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0182028_20	1423807.BACO01000037_gene1103	67.0	0.0000000000046	N/A	N/A
PHROG	UHGV-0182028_22	phrog_190	100.8	1.3e-29	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0182028_22	UniRef90_A0A845R8D4	124.0	1.5e-33	N/A	N/A
eggNOG-mapper	UHGV-0182028_22	1226322.HMPREF1545_00295	115.0	1.15e-30	N/A	N/A
Pfam	UHGV-0182028_22	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0182028_22	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0182028_25	phrog_3136	132.9	1.1e-39	N/A	unknown function
UniRef90	UHGV-0182028_25	UniRef90_A0A3D0HBD2	114.0	1.6e-29	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0182028_25	198628.Dda3937_01763	53.9	0.000000285	ASCH	N/A
Pfam	UHGV-0182028_25	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0182028_25	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0182028_25	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
KOfam	UHGV-0182028_27	K00390	94.4	1.2e-27	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0182028_27	phrog_424	121.5	5.1e-36	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0182028_27	UniRef90_UPI001D087498	408.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0182028_27	1408437.JNJN01000032_gene2312	325.0	0	Phosphoadenosine phosphosulfate reductase	N/A
Pfam	UHGV-0182028_27	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0182028_27	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0182028_27	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0182028_31	PF05082	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0182028_32	NF041247	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0182028_34	PF10548	N/A	N/A	N/A	N/A
KOfam	UHGV-0182028_38	K22300	55.3	0.0000000000000014	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0182028_38	phrog_8	48.4	0.0000000000002	transcriptional regulator	transcription regulation
UniRef90	UHGV-0182028_38	UniRef90_E2ZIF0	115.0	1.64e-30	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0182028_38	748224.HMPREF9436_01444	115.0	2.75e-31	N/A	N/A
Pfam	UHGV-0182028_38	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0182028_38	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0182028_38	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0182028_39	471855.Shel_04260	62.8	0.0000000606	dextransucrase activity	N/A
COG	UHGV-0182028_39	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
Pfam	UHGV-0182028_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0182028_41	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0182028_41	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0182028_42	K14059	207.5	0	int; integrase	N/A
PHROG	UHGV-0182028_42	phrog_1	198.1	0	integrase	integration and excision
UniRef90	UHGV-0182028_42	UniRef90_A0A212JT52	254.0	0	Putative Integrase family protein	N/A
eggNOG-mapper	UHGV-0182028_42	1507.HMPREF0262_00307	199.0	0	Phage integrase family	N/A
Pfam	UHGV-0182028_42	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0182028_42	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0182028_42	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0182028_42	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0182028_43	UniRef90_A0A8F0WD75	79.7	0.00000000000000148	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0182028_43	1378168.N510_03079	70.9	0.00000000000153	N/A	N/A
eggNOG-mapper	UHGV-0182028_47	1160721.RBI_I00206	52.4	0.0000000279	N/A	N/A
structural_annotation	UHGV-0182028_47	PF10723	N/A	N/A	N/A	N/A
PHROG	UHGV-0182028_48	phrog_14030	136.4	1.90001e-40	N/A	unknown function
UniRef90	UHGV-0182028_48	UniRef90_R6LL81	235.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-0182028_48	1410624.JNKK01000008_gene1745	110.0	2.04e-25	repeat protein	N/A
COG	UHGV-0182028_48	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
PHROG	UHGV-0182028_49	phrog_6918	95.2	4.1e-28	holin	lysis
UniRef90	UHGV-0182028_49	UniRef90_A0A316QCY7	102.0	3.48e-26	Holin	N/A
eggNOG-mapper	UHGV-0182028_49	1297617.JPJD01000020_gene301	100.0	2.43e-26	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0182028_49	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0182028_49	PF09682,TIGR01673	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0182028_53	1519439.JPJG01000060_gene1895	61.2	0.00000000314	N/A	N/A
structural_annotation	UHGV-0182028_53	PF10618	N/A	N/A	N/A	N/A
PHROG	UHGV-0182028_55	phrog_10993	50.3	0.000000000000024	Hoc-like head decoration	head and packaging
eggNOG-mapper	UHGV-0182028_55	742738.HMPREF9460_02534	66.2	0.00000000127	N/A	N/A
Pfam	UHGV-0182028_55	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0182028_55	PF19789	N/A	N/A	N/A	N/A
KOfam	UHGV-0182028_56	K13884	81.4	9.6e-24	MARCO; macrophage receptor with collagenous structure	N/A
PHROG	UHGV-0182028_56	phrog_5073	80.1	2.1e-31	tail fiber protein	tail
eggNOG-mapper	UHGV-0182028_56	1151292.QEW_0668	65.5	0.00000000221	cellulose 1,4-beta-cellobiosidase activity	N/A
Pfam	UHGV-0182028_56	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0182028_56	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A