UHGV-0182248 (vOTU-079094)

Viral Genome: UHGV-0182248

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0182248
vOTU ID	vOTU-079094
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_594184
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	93.36 (High-quality)
Trimmed?	No
CheckV Viral Markers	13
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.972
Viral Hallmark Genes (geNomad)	8
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	34.41
Jumbo Phage?	No

Genome Content
Length (bps)	37,801
GC Content	55.86%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	57
CDS Density	91%
Average CDS Length (bps)	602.05
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 93.36)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0182248_1	phrog_144	65.2	1.1e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0182248_1	UniRef90_A0A1M5WHB2	130.0	4.71e-36	5-methylcytosine-specific restriction enzyme A	N/A
eggNOG-mapper	UHGV-0182248_1	1007103.AFHW01000096_gene3242	70.1	0.000000000000261	HNH nucleases	N/A
COG	UHGV-0182248_1	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0182248_2	phrog_11237	67.5	6.2e-20	N/A	unknown function
eggNOG-mapper	UHGV-0182248_2	742740.HMPREF9474_02326	50.4	0.00000671	N/A	N/A
PHROG	UHGV-0182248_3	phrog_3584	192.5	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0182248_3	1415775.U729_1544	150.0	4.60004e-41	N/A	N/A
structural_annotation	UHGV-0182248_3	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-0182248_4	phrog_24368	46.2	0.00000000000066	N/A	unknown function
PHROG	UHGV-0182248_5	phrog_190	103.0	2.3e-30	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0182248_5	UniRef90_A0A8H9YLQ0	89.4	3.22e-20	N/A	N/A
eggNOG-mapper	UHGV-0182248_5	399741.Spro_4945	73.2	0.0000000000000108	N/A	N/A
Pfam	UHGV-0182248_5	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0182248_5	PF06356,MF_04160,NF033179	N/A	N/A	N/A	N/A
KOfam	UHGV-0182248_6	K03497	126.2	4e-37	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0182248_6	phrog_6218	276.7	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0182248_6	UniRef90_UPI001F030AE8	253.0	0	ParB/RepB/Spo0J family partition protein	N/A
eggNOG-mapper	UHGV-0182248_6	394503.Ccel_3306	251.0	0	Belongs to the ParB family	N/A
Pfam	UHGV-0182248_6	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
NCBIFam	UHGV-0182248_6	TIGR00180.1	N/A	N/A	ParB/RepB/Spo0J family partition protein	N/A
COG	UHGV-0182248_6	COG0710	N/A	N/A	3-dehydroquinate dehydratase	N/A
structural_annotation	UHGV-0182248_6	PF02195,PF18579,MF_02015,TIGR00180,COG1475	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0182248_18	PF12728,NF040990	N/A	N/A	N/A	N/A
KOfam	UHGV-0182248_22	K22300	40.6	0.000000000047	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0182248_22	phrog_4	41.4	0.000000000028	transcriptional repressor	transcription regulation
UniRef90	UHGV-0182248_22	UniRef90_UPI001C3B03CA	92.8	2.15e-21	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0182248_22	1203606.HMPREF1526_01317	59.7	0.00000000218	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0182248_22	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0182248_22	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0182248_22	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0182248_24	UniRef90_R5HRH2	70.5	0.00000000000116	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0182248_24	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0182248_24	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0182248_24	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0182248_26	K14059	229.7	0	int; integrase	N/A
PHROG	UHGV-0182248_26	phrog_1	191.3	0	integrase	integration and excision
UniRef90	UHGV-0182248_26	UniRef90_A0A416ZBA5	152.0	1.14e-38	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0182248_26	1294142.CINTURNW_1001	112.0	7.54e-25	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0182248_26	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0182248_26	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0182248_26	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0182248_26	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0182248_30	PF07878,NF041264,COG4710	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0182248_35	1499683.CCFF01000016_gene802	49.3	0.00000998	N/A	N/A
PHROG	UHGV-0182248_36	phrog_937	48.5	0.00000000000015	hemolysin	other
PHROG	UHGV-0182248_37	phrog_14030	119.7	1.5e-35	N/A	unknown function
UniRef90	UHGV-0182248_37	UniRef90_A0A416FZN6	186.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0182248_37	411461.DORFOR_00720	152.0	2.94006e-41	N/A	N/A
Pfam	UHGV-0182248_37	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0182248_37	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
structural_annotation	UHGV-0182248_37	PF01471,PF18342,TIGR02869,TIGR04457,COG4991	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0182248_38	1230342.CTM_17037	60.1	0.00000136	Siphovirus ReqiPepy6 Gp37-like protein	N/A
structural_annotation	UHGV-0182248_38	PF00927,PF03422,MF_04116,NF040680,COG4326	N/A	N/A	N/A	N/A
PHROG	UHGV-0182248_41	phrog_1067	171.0	0	minor head protein	head and packaging
UniRef90	UHGV-0182248_41	UniRef90_A0A1Q6PU45	268.0	0	SH3b domain-containing protein	N/A
eggNOG-mapper	UHGV-0182248_41	1415774.U728_1242	58.5	0.00000736	Phage minor structural protein	N/A
Pfam	UHGV-0182248_41	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
Pfam	UHGV-0182248_41	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0182248_41	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0182248_41	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0182248_41	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0182248_42	phrog_33	68.7	1.4e-19	distal tail protein Dit	tail
UniRef90	UHGV-0182248_42	UniRef90_A0A136WGB8	109.0	9.78e-26	Phage tail protein	N/A
eggNOG-mapper	UHGV-0182248_42	1414720.CBYM010000005_gene1383	105.0	9.53e-25	tail component	N/A
COG	UHGV-0182248_42	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0182248_42	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0182248_43	phrog_13339	292.1	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0182248_43	1476973.JMMB01000007_gene1771	161.0	2.82e-37	Phage-related minor tail protein	N/A
Pfam	UHGV-0182248_43	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0182248_43	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0182248_43	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0182248_44	PF11836,TIGR01674	N/A	N/A	N/A	N/A
PHROG	UHGV-0182248_45	phrog_88	78.4	9.6e-23	major tail protein	tail
UniRef90	UHGV-0182248_45	UniRef90_A0A174HPA5	62.4	0.0000000107	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0182248_45	1123075.AUDP01000020_gene1518	68.9	0.00000000000684	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0182248_45	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0182248_45	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0182248_45	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0182248_46	1203606.HMPREF1526_00974	52.0	0.0000018	N/A	N/A
UniRef90	UHGV-0182248_47	UniRef90_A0A4S2AEF8	67.4	0.00000000000514	Phage tail protein	N/A
eggNOG-mapper	UHGV-0182248_47	1235792.C808_03059	55.5	0.000000305	phage major tail protein, phi13 family	N/A
COG	UHGV-0182248_47	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0182248_47	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-0182248_48	UniRef90_UPI00164B7AD3	77.4	4.04e-16	phage head closure protein	N/A
Pfam	UHGV-0182248_48	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-0182248_48	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0182248_49	phrog_442	85.7	5.2e-25	head-tail adaptor	connector
UniRef90	UHGV-0182248_49	UniRef90_A0A7S8C282	77.4	0.0000000000000215	Phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0182248_49	1449126.JQKL01000051_gene3168	92.8	4.5e-21	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0182248_49	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0182248_49	TIGR02215.1	N/A	N/A	phage conserved hypothetical protein, phiE125 gp8 family	N/A
structural_annotation	UHGV-0182248_49	PF05135,TIGR02215	N/A	N/A	N/A	N/A
PHROG	UHGV-0182248_51	phrog_10	210.3	0	major head protein	head and packaging
UniRef90	UHGV-0182248_51	UniRef90_A0A1V5WB68	378.0	0	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-0182248_51	29306.JOBE01000011_gene7273	273.0	0	capsid protein	N/A
Pfam	UHGV-0182248_51	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0182248_51	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0182248_51	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0182248_51	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0182248_52	K01358	157.4	0	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0182248_52	phrog_94	249.2	0	head maturation protease	head and packaging
UniRef90	UHGV-0182248_52	UniRef90_UPI00164B0DA5	256.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0182248_52	748727.CLJU_c03550	224.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0182248_52	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0182248_52	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0182248_52	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0182248_53	phrog_12	287.8	0	portal protein	head and packaging
UniRef90	UHGV-0182248_53	UniRef90_A0A1V5WBB3	473.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0182248_53	663278.Ethha_1836	274.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0182248_53	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0182248_53	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0182248_53	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0182248_53	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0182248_54	phrog_9	403.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0182248_54	UniRef90_UPI00164ABF0B	731.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0182248_54	1122919.KB905559_gene1359	631.0	0	Terminase	N/A
Pfam	UHGV-0182248_54	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0182248_54	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0182248_54	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0182248_54	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0182248_55	phrog_83	109.7	2.4e-32	terminase small subunit	head and packaging
UniRef90	UHGV-0182248_55	UniRef90_UPI0003615350	120.0	1.02e-31	phage terminase small subunit P27 family	N/A
eggNOG-mapper	UHGV-0182248_55	1508644.SFBmNL_00836	64.7	0.0000000000831	Phage terminase, small subunit	N/A
Pfam	UHGV-0182248_55	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
NCBIFam	UHGV-0182248_55	TIGR01558.1	N/A	N/A	phage terminase small subunit P27 family	N/A
COG	UHGV-0182248_55	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0182248_55	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0182248_56	phrog_424	110.5	1.4e-32	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0182248_56	UniRef90_A0A812FTV0	122.0	5.23e-30	Sulfate reduction	N/A
eggNOG-mapper	UHGV-0182248_56	1331060.RLDS_11480	104.0	8.1e-24	sulfate reduction	N/A
COG	UHGV-0182248_56	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A