UHGV-0183664 (vOTU-046810)

Viral Genome: UHGV-0183664

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0183664
vOTU ID	vOTU-046810
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_596848
Associated Biosample	SAMN09781785
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	21
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9707
Viral Hallmark Genes (geNomad)	12
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	31.82
Jumbo Phage?	No

Genome Content
Length (bps)	45,809
GC Content	32.74%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	74
CDS Density	89%
Average CDS Length (bps)	552.93
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0183664_1	K01447	68.3	1.6e-19	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0183664_1	phrog_7698	170.1	0	endolysin	lysis
UniRef90	UHGV-0183664_1	UniRef90_A0A413UF85	699.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0183664_1	293826.Amet_2548	139.0	1.92e-35	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0183664_1	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0183664_1	PF08460	N/A	N/A	Bacterial SH3 domain	SH3_5
COG	UHGV-0183664_1	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-0183664_1	PF01510,PF18342,PF08239,MF_04111,NF040670,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0183664_3	phrog_443	56.0	0.0000000000000011	holin	lysis
UniRef90	UHGV-0183664_3	UniRef90_A0A2U2ELA1	78.6	9.53e-18	Membrane protein	N/A
eggNOG-mapper	UHGV-0183664_3	476272.RUMHYD_01759	83.6	2.29e-20	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0183664_3	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0183664_3	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0183664_5	phrog_20016	63.1	3.4e-18	N/A	unknown function
UniRef90	UHGV-0183664_5	UniRef90_A0A395WF88	258.0	0	BclA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0183664_5	1226322.HMPREF1545_00077	63.2	0.000000000107	N/A	N/A
structural_annotation	UHGV-0183664_5	PF18573,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-0183664_6	UniRef90_A0A8F0WFQ8	70.1	0.0000000000748	Outer capsid protein/viral fiber	N/A
eggNOG-mapper	UHGV-0183664_6	476272.RUMHYD_01770	114.0	8.99e-29	N/A	N/A
PHROG	UHGV-0183664_13	phrog_19280	83.3	2.2e-24	N/A	unknown function
UniRef90	UHGV-0183664_13	UniRef90_A0A413UF00	651.0	0	N/A	N/A
eggNOG-mapper	UHGV-0183664_13	1160721.RBI_I01569	99.4	6.34e-20	N/A	N/A
Pfam	UHGV-0183664_13	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0183664_13	PF19789	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0183664_15	PF16407,TIGR02657,COG3794	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0183664_16	PF05895,MF_04116,NF010681,COG1361	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0183664_17	PF10651,COG5513	N/A	N/A	N/A	N/A
PHROG	UHGV-0183664_18	phrog_1067	59.1	1.3e-23	minor head protein	head and packaging
eggNOG-mapper	UHGV-0183664_18	1232446.BAIE02000002_gene836	75.1	0.0000000000268	Phage minor structural protein	N/A
NCBIFam	UHGV-0183664_18	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0183664_18	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0183664_18	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0183664_19	PF05939,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0183664_20	K20478	62.4	3.6e-19	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-0183664_20	phrog_13339	343.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0183664_20	UniRef90_A0A395WD11	985.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0183664_20	423476.A3F654_9CAUD	241.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-0183664_20	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0183664_20	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
structural_annotation	UHGV-0183664_20	PF10145,TIGR01760,TIGR02971,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0183664_21	phrog_3033	40.2	0.000000000031	N/A	unknown function
structural_annotation	UHGV-0183664_22	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0183664_23	phrog_88	140.3	9.80068e-42	major tail protein	tail
UniRef90	UHGV-0183664_23	UniRef90_A0A395WA58	330.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0183664_23	1111134.HMPREF1253_0377	142.0	6.33e-40	Phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0183664_23	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0183664_23	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-0183664_24	UniRef90_A0A374RUJ8	140.0	2.04e-40	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0183664_24	86416.Clopa_0344	58.5	0.00000000454	N/A	N/A
Pfam	UHGV-0183664_24	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0183664_24	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
UniRef90	UHGV-0183664_25	UniRef90_C3DN78	51.2	0.00000576	Prophage pi2 protein 38	N/A
structural_annotation	UHGV-0183664_25	PF05657,MF_00281,COG0016	N/A	N/A	N/A	N/A
PHROG	UHGV-0183664_26	phrog_1951	72.6	3.8e-21	head-tail adaptor	connector
UniRef90	UHGV-0183664_26	UniRef90_A0A395WC07	227.0	0	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0183664_26	588581.Cpap_1270	60.8	0.000000000187	N/A	N/A
NCBIFam	UHGV-0183664_26	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0183664_26	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0183664_27	phrog_5223	51.7	0.000000000000012	neck protein	connector
UniRef90	UHGV-0183664_27	UniRef90_A0A374RXD1	82.4	1.54e-18	DNA-packaging protein	N/A
structural_annotation	UHGV-0183664_27	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0183664_28	phrog_10	79.8	3.9e-23	major head protein	head and packaging
UniRef90	UHGV-0183664_28	UniRef90_A0A395WF70	796.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0183664_28	1536774.H70357_10630	167.0	2.52234e-44	Phage capsid family	N/A
Pfam	UHGV-0183664_28	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0183664_28	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0183664_28	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0183664_28	PF05065,PF19962,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0183664_29	K06904	88.6	8.5e-26	N/A	N/A
PHROG	UHGV-0183664_29	phrog_80	119.3	5e-35	head maturation protease	head and packaging
UniRef90	UHGV-0183664_29	UniRef90_A0A413UET6	353.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0183664_29	445975.COLSTE_02163	176.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0183664_29	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0183664_29	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0183664_29	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0183664_29	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0183664_30	phrog_12	103.8	1.3e-30	portal protein	head and packaging
UniRef90	UHGV-0183664_30	UniRef90_A0A395W9X2	838.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0183664_30	1203606.HMPREF1526_01337	290.0	0	Portal protein	N/A
Pfam	UHGV-0183664_30	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0183664_30	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0183664_30	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0183664_31	phrog_9	307.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0183664_31	UniRef90_A0A395WD03	1117.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0183664_31	742740.HMPREF9474_04307	541.0	0	COG COG4626 Phage terminase-like protein, large subunit	N/A
Pfam	UHGV-0183664_31	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0183664_31	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0183664_31	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0183664_31	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0183664_32	phrog_361	82.2	5e-24	terminase small subunit	head and packaging
UniRef90	UHGV-0183664_32	UniRef90_A0A7C6YMQ8	72.0	0.0000000000000923	P27 family phage terminase small subunit	N/A
Pfam	UHGV-0183664_32	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0183664_32	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0183664_32	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0183664_33	phrog_119	58.5	1.1e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0183664_33	UniRef90_A0A395WA48	253.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0183664_33	1211814.CAPG01000074_gene3460	66.2	0.00000000000163	HNH endonuclease	N/A
Pfam	UHGV-0183664_33	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0183664_33	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
UniRef90	UHGV-0183664_34	UniRef90_A0A395WDY7	122.0	3.29e-35	HTH_8 domain-containing protein	N/A
eggNOG-mapper	UHGV-0183664_34	1145276.T479_12115	56.6	0.000000000665	Helix-turn-helix domain	N/A
eggNOG-mapper	UHGV-0183664_39	592031.GCWU000322_00057	73.2	0.00000000000129	N/A	N/A
PHROG	UHGV-0183664_45	phrog_2316	44.0	0.0000000000037	N/A	unknown function
UniRef90	UHGV-0183664_45	UniRef90_A0A3E4YBW5	123.0	8.57e-35	N/A	N/A
eggNOG-mapper	UHGV-0183664_45	1280676.AUJO01000024_gene3262	65.1	0.00000000000151	N/A	N/A
structural_annotation	UHGV-0183664_45	PF16475,MF_00436,NF033216	N/A	N/A	N/A	N/A
PHROG	UHGV-0183664_46	phrog_478	105.9	2.4e-31	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0183664_46	UniRef90_A0A0J8Z1B9	178.0	0	Prophage pi1 protein 29	N/A
eggNOG-mapper	UHGV-0183664_46	272623.L62008	79.0	5.42e-17	N/A	N/A
UniRef90	UHGV-0183664_47	UniRef90_A0A413UEX6	292.0	0	N/A	N/A
structural_annotation	UHGV-0183664_47	PF07374,NF008895	N/A	N/A	N/A	N/A
PHROG	UHGV-0183664_51	phrog_15198	42.4	0.0000000000053	N/A	unknown function
UniRef90	UHGV-0183664_51	UniRef90_A0A395WBY6	151.0	4.48416e-44	N/A	N/A
Pfam	UHGV-0183664_51	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0183664_52	PF17399	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0183664_56	PF17888	N/A	N/A	N/A	N/A
PHROG	UHGV-0183664_57	phrog_173	113.5	1.9e-33	nucleoside triphosphate pyrophosphohydrolase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0183664_57	UniRef90_UPI001C25836D	221.0	0	dUTPase	N/A
eggNOG-mapper	UHGV-0183664_57	218284.CCDN010000001_gene545	73.6	0.0000000000000405	dUTPase	N/A
Pfam	UHGV-0183664_57	PF08761	N/A	N/A	dUTPase	dUTPase_2
COG	UHGV-0183664_57	COG4508	N/A	N/A	Dimeric dUTPase, all-alpha-NTP-PPase (MazG) superfamily	N/A
structural_annotation	UHGV-0183664_57	PF08761,COG4508	N/A	N/A	N/A	N/A
PHROG	UHGV-0183664_58	phrog_2715	123.3	1.4e-36	N/A	unknown function
eggNOG-mapper	UHGV-0183664_58	642492.Clole_0950	130.0	9.66e-37	N/A	N/A
structural_annotation	UHGV-0183664_58	PF18406	N/A	N/A	N/A	N/A
PHROG	UHGV-0183664_59	phrog_757	69.9	2.6e-20	DNA methyltransferase	other
eggNOG-mapper	UHGV-0183664_59	428127.EUBDOL_01513	336.0	0	N/A	N/A
AcrCatalog	UHGV-0183664_59	cluster_47493	182.0	0	NA	N/A
structural_annotation	UHGV-0183664_59	PF00145,MF_00341,COG0270	N/A	N/A	N/A	N/A
UniRef90	UHGV-0183664_62	UniRef90_R6T064	78.6	0.0000000000000211	NUMOD4 domain-containing protein	N/A
structural_annotation	UHGV-0183664_62	PF13392,PF07453	N/A	N/A	N/A	N/A
KOfam	UHGV-0183664_63	K02315	120.2	2.2e-35	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0183664_63	phrog_50	106.9	2.3e-31	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0183664_63	UniRef90_A0A395WER8	542.0	0	Bac_DnaA domain-containing protein	N/A
eggNOG-mapper	UHGV-0183664_63	1232446.BAIE02000011_gene1611	132.0	1.75e-34	N/A	N/A
Pfam	UHGV-0183664_63	PF00308	N/A	N/A	Bacterial dnaA protein	Bac_DnaA
COG	UHGV-0183664_63	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0183664_63	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0183664_64	phrog_428	143.6	1.60028e-42	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0183664_64	UniRef90_A0A395WBX6	501.0	0	Phg_2220_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0183664_64	279808.SH2379	147.0	1.25e-40	Conserved phage C-terminus (Phg_2220_C)	N/A
Pfam	UHGV-0183664_64	PF09524	N/A	N/A	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
NCBIFam	UHGV-0183664_64	TIGR02220.1	N/A	N/A	phage conserved hypothetical protein, C-terminal domain	N/A
COG	UHGV-0183664_64	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0183664_64	PF09524,PF08679,MF_01909,TIGR02220,NF040939,COG1675	N/A	N/A	N/A	N/A
KOfam	UHGV-0183664_66	K04763	136.8	2.4e-40	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0183664_66	phrog_1	118.5	7e-35	integrase	integration and excision
UniRef90	UHGV-0183664_66	UniRef90_A0A395W9T7	570.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0183664_66	908340.HMPREF9406_2589	229.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0183664_66	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0183664_66	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0183664_66	PF00589,PF13495,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0183664_70	K18830	58.5	8.8e-17	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0183664_70	phrog_2967	52.4	0.0000000000000083	transcriptional regulator	transcription regulation
UniRef90	UHGV-0183664_70	UniRef90_A0A395WA05	207.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0183664_70	999413.HMPREF1094_02045	98.2	1.57e-24	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0183664_70	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0183664_70	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0183664_70	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0183664_71	UniRef90_A0A4R1RC20	106.0	8.72e-26	Putative heavy-metal-binding protein	N/A
eggNOG-mapper	UHGV-0183664_71	517418.Ctha_1419	107.0	8.43e-25	Putative heavy-metal-binding	N/A
Pfam	UHGV-0183664_71	PF01906	N/A	N/A	Putative heavy-metal-binding	YbjQ_1
COG	UHGV-0183664_71	COG0393	N/A	N/A	N/A	N/A
PHROG	UHGV-0183664_72	phrog_5059	186.5	0	N/A	unknown function
UniRef90	UHGV-0183664_72	UniRef90_A0A395WDV4	501.0	0	N/A	N/A
eggNOG-mapper	UHGV-0183664_72	1232446.BAIE02000002_gene792	170.0	0	N/A	N/A
Pfam	UHGV-0183664_72	PF08861	N/A	N/A	N/A	DUF1828
Pfam	UHGV-0183664_72	PF08862	N/A	N/A	N/A	DUF1829
structural_annotation	UHGV-0183664_72	PF08862,PF08861,MF_00722,COG3372	N/A	N/A	N/A	N/A
PHROG	UHGV-0183664_73	phrog_21094	40.1	0.000000000045	N/A	unknown function
UniRef90	UHGV-0183664_73	UniRef90_A0A2A2EE23	68.6	0.00000000000773	N/A	N/A
eggNOG-mapper	UHGV-0183664_73	428127.EUBDOL_01263	100.0	7.21e-25	N/A	N/A
KOfam	UHGV-0183664_74	K14059	199.3	0	int; integrase	N/A
PHROG	UHGV-0183664_74	phrog_1	178.4	0	integrase	integration and excision
UniRef90	UHGV-0183664_74	UniRef90_A0A395WBW7	737.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0183664_74	1235796.C815_00955	298.0	0	DNA integration	N/A
Pfam	UHGV-0183664_74	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0183664_74	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0183664_74	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A