UHGV-0184645 (vOTU-074253)

Viral Genome: UHGV-0184645

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0184645
vOTU ID	vOTU-074253
Representative Genome?	Yes
Source	CHVD
Original Genome ID	SAMN00779630_a1_ct32035_vs1@linear@Siphoviridae__sp._ctvxe1
Associated Biosample	SAMN00779630
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	90.03 (High-quality)
Trimmed?	Yes
CheckV Viral Markers	20
CheckV Host Markers	2
Recoded?	No

Viral Content
geNomad score	0.9784
Viral Hallmark Genes (geNomad)	10
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	38.96
Jumbo Phage?	No

Genome Content
Length (bps)	40,341
GC Content	45.70%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	77
CDS Density	91%
Average CDS Length (bps)	476.03
Total tRNA Genes	2
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 90.03)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0184645_1	phrog_4431	285.3	0	N/A	unknown function
UniRef90	UHGV-0184645_1	UniRef90_R6SKH4	506.0	0	SHOCT domain-containing protein	N/A
eggNOG-mapper	UHGV-0184645_1	1298920.KI911353_gene4876	104.0	7.68e-24	N/A	N/A
Pfam	UHGV-0184645_1	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
structural_annotation	UHGV-0184645_1	PF15947,PF14471	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_2	phrog_20886	130.2	2.9e-39	N/A	unknown function
eggNOG-mapper	UHGV-0184645_2	476272.RUMHYD_02825	66.6	0.000000000000529	N/A	N/A
structural_annotation	UHGV-0184645_2	PF06114	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_3	phrog_8	48.5	0.00000000000019	transcriptional regulator	transcription regulation
UniRef90	UHGV-0184645_3	UniRef90_R6RVP1	243.0	0	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-0184645_3	476272.RUMHYD_02826	148.0	1.54143e-44	TRANSCRIPTIONal	N/A
Pfam	UHGV-0184645_3	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0184645_3	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0184645_3	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0184645_5	UniRef90_R6RP34	112.0	1.56e-31	DNA binding domain protein excisionase family	N/A
eggNOG-mapper	UHGV-0184645_5	610130.Closa_1362	89.4	2.95e-23	Helix-turn-helix domain	N/A
Pfam	UHGV-0184645_5	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0184645_5	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-0184645_5	PF12728,NF040990,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_7	phrog_4292	41.6	0.000000000016	N/A	unknown function
eggNOG-mapper	UHGV-0184645_9	1235802.C823_04724	110.0	6.74e-27	N/A	N/A
AcrCatalog	UHGV-0184645_10	cluster_17974	134.0	8.40779e-45	NA	N/A
PHROG	UHGV-0184645_15	phrog_253	119.3	2.8e-35	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0184645_15	UniRef90_R6SKJ6	297.0	0	Siphovirus family protein	N/A
eggNOG-mapper	UHGV-0184645_15	903814.ELI_1272	54.7	0.000000479	Siphovirus Gp157	N/A
Pfam	UHGV-0184645_15	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0184645_15	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_16	phrog_155	124.2	1e-36	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0184645_16	UniRef90_A0A1C6CBK6	315.0	0	ERF superfamily	N/A
eggNOG-mapper	UHGV-0184645_16	1304866.K413DRAFT_1196	251.0	0	ERF superfamily	N/A
Pfam	UHGV-0184645_16	PF04404	N/A	N/A	ERF superfamily	ERF
COG	UHGV-0184645_16	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0184645_16	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_17	phrog_72	63.2	3.8e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0184645_17	1304866.K413DRAFT_1197	228.0	0	N/A	N/A
structural_annotation	UHGV-0184645_17	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_18	phrog_7566	101.8	3.3e-30	N/A	unknown function
UniRef90	UHGV-0184645_18	UniRef90_A0A2T3EXD0	132.0	3.72e-38	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-0184645_18	693746.OBV_24070	50.4	0.00000117	N/A	N/A
PHROG	UHGV-0184645_19	phrog_2113	81.7	5.6e-24	N/A	unknown function
eggNOG-mapper	UHGV-0184645_19	1160721.RBI_II00485	51.2	0.000000944	N/A	N/A
structural_annotation	UHGV-0184645_19	PF21715,TIGR04176,COG1654	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_20	phrog_15768	252.7	0	N/A	unknown function
UniRef90	UHGV-0184645_20	UniRef90_R6RVQ1	466.0	0	Chromosome segregation ATPases	N/A
eggNOG-mapper	UHGV-0184645_20	1121344.JHZO01000003_gene982	115.0	1.69e-28	N/A	N/A
AcrCatalog	UHGV-0184645_20	cluster_14472	197.0	0	NA	N/A
Pfam	UHGV-0184645_20	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0184645_20	PF19808	N/A	N/A	N/A	N/A
UniRef90	UHGV-0184645_21	UniRef90_R6SKK0	150.0	0	(ABCB) permease/ATP-binding protein efflux ABC transporter heavy metal transporter family	N/A
eggNOG-mapper	UHGV-0184645_25	1304866.K413DRAFT_1204	56.2	0.00000000272	N/A	N/A
PHROG	UHGV-0184645_26	phrog_19106	222.0	0	N/A	unknown function
UniRef90	UHGV-0184645_26	UniRef90_R6RVQ6	231.0	0	GIY-YIG domain-containing protein	N/A
eggNOG-mapper	UHGV-0184645_26	658655.HMPREF0988_00875	152.0	2.8026e-45	N/A	N/A
structural_annotation	UHGV-0184645_26	TIGR01453	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0184645_27	397290.C810_01367	72.0	0.0000000000000658	N/A	N/A
PHROG	UHGV-0184645_29	phrog_424	95.1	7.7e-28	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0184645_29	UniRef90_A0A173RHG7	234.0	0	PUA domain (Predicted RNA-binding domain)	N/A
eggNOG-mapper	UHGV-0184645_29	476272.RUMHYD_03330	234.0	0	N/A	N/A
PADLOC	UHGV-0184645_29	SspD_00001	45.8	0.0000000000017	SspD	SSP
COG	UHGV-0184645_29	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0184645_29	PF01507,MF_01161,NF005316,COG1606	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_30	phrog_599	53.5	0.0000000000000055	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0184645_30	UniRef90_UPI001D09006D	66.2	0.000000000000644	Lar family restriction alleviation protein	N/A
Pfam	UHGV-0184645_30	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0184645_30	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
dbAPIS	UHGV-0184645_30	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-0184645_30	PF14354,TIGR03655	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-0184645_31	cluster_11670	45.8	0.00000000477	NA	N/A
PHROG	UHGV-0184645_32	phrog_33130	160.9	0	N/A	unknown function
structural_annotation	UHGV-0184645_32	PF10922,MF_00839	N/A	N/A	N/A	N/A
KOfam	UHGV-0184645_36	K07474	107.6	2.2e-31	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0184645_36	phrog_51	117.1	1.1e-34	terminase small subunit	head and packaging
UniRef90	UHGV-0184645_36	UniRef90_A0A1I0K7H5	161.0	0	Phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0184645_36	476272.RUMHYD_01754	142.0	3.15993e-42	Terminase small subunit	N/A
Pfam	UHGV-0184645_36	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0184645_36	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0184645_36	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0184645_38	K06909	337.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0184645_38	phrog_3717	166.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0184645_38	UniRef90_R6RP56	811.0	0	Phage terminase large subunit pbsx family	N/A
eggNOG-mapper	UHGV-0184645_38	397291.C804_01612	412.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0184645_38	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0184645_38	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0184645_38	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0184645_38	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0184645_38	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_39	phrog_533	298.8	0	portal protein	head and packaging
UniRef90	UHGV-0184645_39	UniRef90_A0A1C6CDM8	604.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0184645_39	33035.JPJF01000106_gene3135	517.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0184645_39	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_40	phrog_581	275.8	0	minor head protein	head and packaging
UniRef90	UHGV-0184645_40	UniRef90_A0A1C6CDG2	610.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0184645_40	33035.JPJF01000106_gene3134	453.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0184645_40	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0184645_40	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0184645_40	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_42	phrog_3754	120.6	9.4e-36	N/A	unknown function
eggNOG-mapper	UHGV-0184645_42	476272.RUMHYD_01764	208.0	0	N/A	N/A
UniRef90	UHGV-0184645_44	UniRef90_A0A395X7A4	137.0	5.1e-40	CTP synthase	N/A
eggNOG-mapper	UHGV-0184645_44	476272.RUMHYD_01766	156.0	0	N/A	N/A
UniRef90	UHGV-0184645_45	UniRef90_A0A843HPX3	69.3	0.0000000000000725	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0184645_45	1235790.C805_00057	55.1	0.00000000515	N/A	N/A
PHROG	UHGV-0184645_47	phrog_21718	239.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0184645_47	476272.RUMHYD_01768	225.0	0	N/A	N/A
PHROG	UHGV-0184645_48	phrog_22984	126.6	6.7e-38	N/A	unknown function
PHROG	UHGV-0184645_49	phrog_16490	249.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0184645_49	476272.RUMHYD_01770	265.0	0	N/A	N/A
PHROG	UHGV-0184645_50	phrog_20016	214.1	0	N/A	unknown function
UniRef90	UHGV-0184645_50	UniRef90_A0A345BPX4	109.0	3.99e-28	Carbohydrate binding domain/collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0184645_50	397290.C810_05214	103.0	2.42e-26	N/A	N/A
structural_annotation	UHGV-0184645_50	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_51	phrog_28802	335.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0184645_51	476272.RUMHYD_01772	227.0	0	N/A	N/A
PHROG	UHGV-0184645_52	phrog_194	71.4	1.4e-20	head scaffolding protein	head and packaging
UniRef90	UHGV-0184645_52	UniRef90_UPI001D14C9C8	228.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0184645_52	476272.RUMHYD_01775	210.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0184645_52	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0184645_53	phrog_544	176.2	0	major head protein	head and packaging
UniRef90	UHGV-0184645_53	UniRef90_A0A395X7A1	511.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0184645_53	476272.RUMHYD_01776	352.0	0	N/A	N/A
structural_annotation	UHGV-0184645_53	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_54	phrog_541	112.8	1.4e-33	head-tail adaptor	connector
eggNOG-mapper	UHGV-0184645_54	476272.RUMHYD_01778	113.0	1.21e-29	N/A	N/A
PHROG	UHGV-0184645_55	phrog_1233	98.5	6.5e-29	N/A	unknown function
eggNOG-mapper	UHGV-0184645_55	33035.JPJF01000106_gene3130	103.0	2.89e-27	N/A	N/A
PHROG	UHGV-0184645_56	phrog_18218	151.6	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0184645_56	UniRef90_A0A8D9PGR5	157.0	0	Holin	N/A
eggNOG-mapper	UHGV-0184645_56	411902.CLOBOL_03424	76.6	9.75e-17	N/A	N/A
structural_annotation	UHGV-0184645_56	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_57	phrog_8680	233.3	0	N/A	unknown function
UniRef90	UHGV-0184645_57	UniRef90_UPI0015711ED3	370.0	0	N/A	N/A
eggNOG-mapper	UHGV-0184645_57	411470.RUMGNA_02208	310.0	0	N/A	N/A
Pfam	UHGV-0184645_57	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0184645_57	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_58	phrog_374	221.9	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0184645_58	UniRef90_A0A7W0C2S3	209.0	0	Putative transcriptional regulator	N/A
eggNOG-mapper	UHGV-0184645_58	86416.Clopa_4295	221.0	0	N/A	N/A
PHROG	UHGV-0184645_59	phrog_3366	71.0	1.7e-20	N/A	unknown function
eggNOG-mapper	UHGV-0184645_59	476272.RUMHYD_01779	107.0	3.62e-28	N/A	N/A
PHROG	UHGV-0184645_60	phrog_2657	229.8	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-0184645_60	UniRef90_A0A6N2U0I2	411.0	0	Phage regulatory protein Rha (Phage_pRha)	N/A
eggNOG-mapper	UHGV-0184645_60	742740.HMPREF9474_03525	319.0	0	phage regulatory protein, rha family	N/A
Pfam	UHGV-0184645_60	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0184645_60	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0184645_60	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0184645_60	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_61	phrog_556	75.7	4.4e-22	minor head protein	head and packaging
UniRef90	UHGV-0184645_61	UniRef90_UPI0008B4CFF0	169.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0184645_61	33035.JPJF01000106_gene3128	166.0	0	N/A	N/A
structural_annotation	UHGV-0184645_61	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_62	phrog_3266	122.0	2.6e-36	tail completion	connector
eggNOG-mapper	UHGV-0184645_62	476272.RUMHYD_01781	144.0	1.79002e-41	N/A	N/A
structural_annotation	UHGV-0184645_62	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_63	phrog_3099	129.9	1.5e-38	N/A	unknown function
eggNOG-mapper	UHGV-0184645_63	1120746.CCNL01000014_gene2102	115.0	1.89e-30	N/A	N/A
structural_annotation	UHGV-0184645_63	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_64	phrog_706	138.9	3.00004e-41	N/A	unknown function
UniRef90	UHGV-0184645_64	UniRef90_A0A1I0K8S4	194.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0184645_64	411902.CLOBOL_00127	193.0	0	N/A	N/A
Pfam	UHGV-0184645_64	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0184645_64	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_65	phrog_11299	102.8	2.6e-30	N/A	unknown function
eggNOG-mapper	UHGV-0184645_65	1449050.JNLE01000003_gene3883	92.4	8.73e-22	N/A	N/A
structural_annotation	UHGV-0184645_65	PF10666	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0184645_66	PF18152	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_67	phrog_1535	295.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0184645_67	UniRef90_A0A173R880	585.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0184645_67	476272.RUMHYD_01785	596.0	0	phage tail tape measure protein	N/A
COG	UHGV-0184645_67	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0184645_67	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_68	phrog_1194	56.8	3.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-0184645_68	411902.CLOBOL_00125	145.0	2.53635e-43	N/A	N/A
structural_annotation	UHGV-0184645_68	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_69	phrog_32744	168.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0184645_69	411902.CLOBOL_00124	455.0	0	N/A	N/A
structural_annotation	UHGV-0184645_69	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0184645_70	phrog_18725	56.2	6.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-0184645_70	411902.CLOBOL_00123	143.0	4.61027e-42	N/A	N/A
eggNOG-mapper	UHGV-0184645_71	1304866.K413DRAFT_0769	97.1	3.21e-23	N/A	N/A
COG	UHGV-0184645_72	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
eggNOG-mapper	UHGV-0184645_73	1298920.KI911353_gene541	54.7	0.00000494	ATPase involved in DNA repair	N/A
COG	UHGV-0184645_73	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
structural_annotation	UHGV-0184645_73	PF07675,NF038128	N/A	N/A	N/A	N/A
UniRef90	UHGV-0184645_76	UniRef90_A0A3A9B3D2	50.4	0.00000119	CHAP domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0184645_76	742740.HMPREF9474_04289	73.6	0.00000000000000906	Peptidoglycan-binding domain 1 protein	N/A
COG	UHGV-0184645_76	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
eggNOG-mapper	UHGV-0184645_77	742740.HMPREF9474_02332	60.5	0.000000000256	N/A	N/A