UHGV-0186457 (vOTU-011185)

Viral Genome: UHGV-0186457

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0186457
vOTU ID	vOTU-011185
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_596895
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	95.9 (High-quality)
Trimmed?	No
CheckV Viral Markers	14
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9763
Viral Hallmark Genes (geNomad)	12
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	34.38
Jumbo Phage?	No

Genome Content
Length (bps)	33,723
GC Content	52.59%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	58
CDS Density	91%
Average CDS Length (bps)	531.93
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 95.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0186457_1	phrog_13845	58.7	7.5e-17	N/A	unknown function
eggNOG-mapper	UHGV-0186457_1	1399942.U3PDR2_9CAUD	67.4	0.000000000000778	N/A	N/A
structural_annotation	UHGV-0186457_1	PF05119,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0186457_2	phrog_9	398.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0186457_2	UniRef90_A0A174HN48	779.0	0	Phage terminase-like protein, large subunit	N/A
eggNOG-mapper	UHGV-0186457_2	1203606.HMPREF1526_00981	771.0	0	Terminase	N/A
Pfam	UHGV-0186457_2	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0186457_2	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0186457_2	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0186457_2	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0186457_3	phrog_12	113.2	1.8e-33	portal protein	head and packaging
UniRef90	UHGV-0186457_3	UniRef90_A0A7X7AAU2	453.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0186457_3	411470.RUMGNA_02063	386.0	0	Phage portal protein	N/A
Pfam	UHGV-0186457_3	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0186457_3	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0186457_3	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0186457_4	K06904	121.3	1.1e-35	N/A	N/A
PHROG	UHGV-0186457_4	phrog_80	146.8	2.10195e-43	head maturation protease	head and packaging
UniRef90	UHGV-0186457_4	UniRef90_UPI000F63D5D1	239.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0186457_4	1203606.HMPREF1526_01338	223.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0186457_4	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0186457_4	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0186457_4	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0186457_4	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0186457_5	phrog_10	179.6	0	major head protein	head and packaging
UniRef90	UHGV-0186457_5	UniRef90_A0A6N8H4E3	468.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0186457_5	1297617.JPJD01000020_gene308	464.0	0	Phage capsid family	N/A
Pfam	UHGV-0186457_5	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0186457_5	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0186457_5	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0186457_5	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0186457_6	phrog_5223	47.8	0.00000000000019	neck protein	connector
UniRef90	UHGV-0186457_6	UniRef90_UPI000C06DEDD	51.2	0.00000178	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0186457_6	1203606.HMPREF1526_00977	62.8	0.00000000000976	N/A	N/A
PHROG	UHGV-0186457_7	phrog_1951	80.7	1.3e-23	head-tail adaptor	connector
UniRef90	UHGV-0186457_7	UniRef90_A0A6N9P9M6	66.6	0.00000000000379	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0186457_7	573061.Clocel_2434	62.8	0.0000000000185	head-tail adaptor	N/A
Pfam	UHGV-0186457_7	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0186457_7	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0186457_7	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0186457_7	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0186457_8	phrog_78	52.1	0.000000000000013	tail terminator	connector
eggNOG-mapper	UHGV-0186457_8	1234664.AMRO01000024_gene1813	56.2	0.00000000928	N/A	N/A
structural_annotation	UHGV-0186457_8	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0186457_9	phrog_5	51.6	0.000000000000026	tail completion or Neck1 protein	connector
Pfam	UHGV-0186457_9	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0186457_9	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0186457_10	phrog_88	92.3	5.7e-27	major tail protein	tail
UniRef90	UHGV-0186457_10	UniRef90_N1ZV08	89.0	2.57e-18	Phi13 family phage major tail protein	N/A
eggNOG-mapper	UHGV-0186457_10	97139.C824_05965	89.0	4.31e-19	N/A	N/A
NCBIFam	UHGV-0186457_10	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0186457_10	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0186457_11	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0186457_12	phrog_33680	151.9	4.2039e-45	N/A	unknown function
UniRef90	UHGV-0186457_12	UniRef90_A0A231NVG0	254.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0186457_12	498761.HM1_2969	245.0	0	nuclear chromosome segregation	N/A
COG	UHGV-0186457_12	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0186457_12	TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0186457_13	phrog_10519	74.9	1.5e-29	virion structural protein	head and packaging
UniRef90	UHGV-0186457_13	UniRef90_A0A428N2K2	80.1	0.00000000000277	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-0186457_13	1195236.CTER_5103	159.0	5.13e-39	N/A	N/A
structural_annotation	UHGV-0186457_13	PF19077,PF06199,PF16794,PF08329,MF_04116,NF040520,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0186457_14	phrog_26795	191.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0186457_14	1382315.JPOI01000001_gene271	244.0	0	N/A	N/A
structural_annotation	UHGV-0186457_14	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
KOfam	UHGV-0186457_20	K21471	66.5	7.2e-19	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	N/A
PHROG	UHGV-0186457_20	phrog_329	53.9	3.5e-16	minor tail protein	tail
UniRef90	UHGV-0186457_20	UniRef90_A0A2V2EEK9	218.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-0186457_20	755731.Clo1100_1179	89.0	1.19e-18	cysteine-type peptidase activity	N/A
Pfam	UHGV-0186457_20	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
Pfam	UHGV-0186457_20	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0186457_20	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0186457_20	PF00877,PF01471,NF033743,COG0791	N/A	N/A	N/A	N/A
UniRef90	UHGV-0186457_21	UniRef90_UPI001E4D989F	52.0	0.00000193	CTP synthase	N/A
eggNOG-mapper	UHGV-0186457_21	552396.HMPREF0863_01650	53.1	0.000000101	N/A	N/A
eggNOG-mapper	UHGV-0186457_22	394503.Ccel_1297	58.5	0.000000000534	N/A	N/A
eggNOG-mapper	UHGV-0186457_24	1384065.JAGS01000001_gene3279	52.0	0.00000464	Plasmid pRiA4b ORF-3-like protein	N/A
Pfam	UHGV-0186457_24	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-0186457_24	PF13384,NF040595	N/A	N/A	N/A	N/A
Pfam	UHGV-0186457_26	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0186457_26	PF21291,TIGR02607,COG3093	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0186457_27	1273103.NM10_00919	62.8	0.000000000676	N/A	N/A
PHROG	UHGV-0186457_29	phrog_16490	53.4	0.0000000000000048	N/A	unknown function
eggNOG-mapper	UHGV-0186457_30	1408437.JNJN01000043_gene802	148.0	2.38221e-44	N/A	N/A
KOfam	UHGV-0186457_32	K14059	244.2	0	int; integrase	N/A
PHROG	UHGV-0186457_32	phrog_1	211.6	0	integrase	integration and excision
UniRef90	UHGV-0186457_32	UniRef90_UPI001C0F402D	167.0	1.54143e-44	site-specific integrase	N/A
eggNOG-mapper	UHGV-0186457_32	1408437.JNJN01000039_gene380	145.0	6e-37	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0186457_32	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0186457_32	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0186457_32	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0186457_32	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0186457_33	K02342	188.7	0	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	N/A
PHROG	UHGV-0186457_33	phrog_192	166.0	0	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0186457_33	UniRef90_UPI0009BC4B95	294.0	0	exonuclease	N/A
eggNOG-mapper	UHGV-0186457_33	545694.TREPR_3623	269.0	0	EXOIII	N/A
PADLOC	UHGV-0186457_33	cd06127	134.5	1e-39	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
Pfam	UHGV-0186457_33	PF00929	N/A	N/A	Exonuclease	RNase_T
NCBIFam	UHGV-0186457_33	TIGR00573.1	N/A	N/A	exonuclease, DNA polymerase III, epsilon subunit family	N/A
COG	UHGV-0186457_33	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
structural_annotation	UHGV-0186457_33	PF00929,PF00533,MF_00157,NF005289,COG0847	N/A	N/A	N/A	N/A
Pfam	UHGV-0186457_34	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
structural_annotation	UHGV-0186457_34	PF13560,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0186457_35	K22300	69.4	6.7e-20	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0186457_35	phrog_8	75.0	1.4e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-0186457_35	UniRef90_A0A417K795	78.2	2.29e-16	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0186457_35	1122173.AXVL01000018_gene460	67.8	0.000000000002	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0186457_35	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0186457_35	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-0186457_36	UniRef90_U7UMW3	66.2	0.000000000000674	Transcriptional regulator, Fis family	N/A
eggNOG-mapper	UHGV-0186457_36	1111454.HMPREF1250_1031	66.2	0.000000000000113	N/A	N/A
structural_annotation	UHGV-0186457_36	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0186457_37	phrog_5	41.2	0.000000000041	tail completion or Neck1 protein	connector
eggNOG-mapper	UHGV-0186457_37	1203606.HMPREF1526_00974	52.0	0.00000175	N/A	N/A
Pfam	UHGV-0186457_37	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0186457_37	TIGR01725	N/A	N/A	N/A	N/A
Pfam	UHGV-0186457_41	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-0186457_41	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0186457_44	phrog_15768	102.0	1.54143e-44	N/A	unknown function
UniRef90	UHGV-0186457_44	UniRef90_A0A8D9PDU3	126.0	6.95e-33	N/A	N/A
eggNOG-mapper	UHGV-0186457_44	1125725.HMPREF1325_1315	89.4	7.4e-19	N/A	N/A
Pfam	UHGV-0186457_44	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0186457_44	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0186457_46	phrog_2118	100.6	1.9e-29	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0186457_46	UniRef90_A0A1Y4A1W6	134.0	5.04e-38	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0186457_46	742740.HMPREF9474_03129	132.0	3.22e-38	HNH endonuclease	N/A
Pfam	UHGV-0186457_46	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0186457_46	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0186457_46	COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-0186457_47	phrog_824	142.6	1.19951e-42	N/A	unknown function
UniRef90	UHGV-0186457_47	UniRef90_A0A6N8GXS9	147.0	4.97461e-43	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0186457_47	642492.Clole_0728	123.0	1.45e-34	VRR-NUC domain	N/A
Pfam	UHGV-0186457_47	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
PHROG	UHGV-0186457_55	phrog_36	45.4	0.0000000000013	transcriptional regulator	transcription regulation
structural_annotation	UHGV-0186457_55	PF05263,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0186457_56	phrog_21498	284.2	0	N/A	unknown function
UniRef90	UHGV-0186457_56	UniRef90_C7MM70	243.0	0	ParB-like nuclease	N/A
eggNOG-mapper	UHGV-0186457_56	1095750.HMPREF9970_2290	243.0	0	chromosome segregation	N/A
COG	UHGV-0186457_56	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0186457_56	PF05869,TIGR01712	N/A	N/A	N/A	N/A
PHROG	UHGV-0186457_58	phrog_119	59.7	4.4e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0186457_58	UniRef90_R6M5E4	111.0	6.44e-30	Prophage LambdaBa04 GP54	N/A
eggNOG-mapper	UHGV-0186457_58	573061.Clocel_2442	100.0	2.38e-26	HNH endonuclease	N/A
Pfam	UHGV-0186457_58	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0186457_58	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A