UHGV-0187566 (vOTU-065449)

Viral Genome: UHGV-0187566

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0187566
vOTU ID	vOTU-065449
Representative Genome?	Yes
Source	GPD
Original Genome ID	uvig_595129
Associated Biosample	SAMN09781756
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	98.24 (High-quality)
Trimmed?	No
CheckV Viral Markers	11
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9765
Viral Hallmark Genes (geNomad)	8
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Uncertain - viral or bacterial
ViralVerify Score	3.44
Jumbo Phage?	No

Genome Content
Length (bps)	41,055
GC Content	54.91%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	58
CDS Density	90%
Average CDS Length (bps)	639.21
Total tRNA Genes	3
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 98.24)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
Pfam	UHGV-0187566_1	PF04448	N/A	N/A	N/A	DUF551
Pfam	UHGV-0187566_2	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
PHROG	UHGV-0187566_3	phrog_4392	48.9	0.000000000000092	N/A	unknown function
KOfam	UHGV-0187566_5	K03111	139.0	5.29999e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0187566_5	phrog_44	151.8	2.8026e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0187566_5	UniRef90_A0A3D1LE19	173.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0187566_5	1121344.JHZO01000004_gene1251	161.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0187566_5	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0187566_5	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0187566_5	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0187566_5	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0187566_5	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
UniRef90	UHGV-0187566_7	UniRef90_UPI001C01A488	140.0	7.04e-40	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0187566_7	561177.ANHYDRO_01396	83.6	1.25e-18	Endodeoxyribonuclease RusA	N/A
COG	UHGV-0187566_7	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0187566_7	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
UniRef90	UHGV-0187566_8	UniRef90_A0A4D7ASB8	309.0	0	N/A	N/A
eggNOG-mapper	UHGV-0187566_8	693746.OBV_01680	313.0	0	N/A	N/A
structural_annotation	UHGV-0187566_8	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0187566_9	693746.OBV_01730	62.4	0.000000000183	N/A	N/A
structural_annotation	UHGV-0187566_9	PF11650	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0187566_11	264201.pc1903	81.3	0.00000000000000962	N/A	N/A
structural_annotation	UHGV-0187566_12	PF17917	N/A	N/A	N/A	N/A
PHROG	UHGV-0187566_13	phrog_15863	157.3	0	N/A	unknown function
UniRef90	UHGV-0187566_13	UniRef90_A0A1Y3R3M0	203.0	0	J domain-containing protein	N/A
eggNOG-mapper	UHGV-0187566_13	693746.OBV_01780	193.0	0	DnaJ molecular chaperone homology domain	N/A
COG	UHGV-0187566_13	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
structural_annotation	UHGV-0187566_14	PF03869,NF010256	N/A	N/A	N/A	N/A
UniRef90	UHGV-0187566_15	UniRef90_UPI00164AED9E	90.5	2.82e-21	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0187566_15	1235798.C817_04600	82.8	4.9e-19	N/A	N/A
Pfam	UHGV-0187566_15	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0187566_15	NF040522,COG2944	N/A	N/A	N/A	N/A
PHROG	UHGV-0187566_16	phrog_374	63.6	5.2e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0187566_16	UniRef90_A0A433XVX6	84.0	1.33e-16	AP2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0187566_16	1125712.HMPREF1316_1499	73.2	0.000000000000154	N/A	N/A
UniRef90	UHGV-0187566_19	UniRef90_UPI0001B2B2BE	57.0	0.00000000115	cysteine-rich KTR domain-containing protein	N/A
eggNOG-mapper	UHGV-0187566_19	397290.C810_03591	53.5	0.00000000486	Cysteine-rich KTR	N/A
Pfam	UHGV-0187566_19	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
KOfam	UHGV-0187566_20	K06909	146.6	2.10195e-43	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0187566_20	phrog_979	118.7	8e-37	terminase large subunit	head and packaging
UniRef90	UHGV-0187566_20	UniRef90_A0A810QAS9	444.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0187566_20	693746.OBV_01690	428.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-0187566_20	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0187566_20	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0187566_20	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0187566_22	phrog_422	111.9	5.5e-33	major head protein	head and packaging
UniRef90	UHGV-0187566_22	UniRef90_A0A6A8VJ17	256.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0187566_22	1408437.JNJN01000001_gene1710	176.0	0	N/A	N/A
Pfam	UHGV-0187566_22	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
structural_annotation	UHGV-0187566_22	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0187566_24	phrog_156	108.9	1.4e-32	portal protein	head and packaging
eggNOG-mapper	UHGV-0187566_24	693746.OBV_01670	508.0	0	N/A	N/A
structural_annotation	UHGV-0187566_24	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0187566_26	phrog_2295	52.4	9.1e-17	N/A	unknown function
Pfam	UHGV-0187566_26	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-0187566_26	PF14686,TIGR03000,COG2512	N/A	N/A	N/A	N/A
PHROG	UHGV-0187566_28	phrog_2310	53.6	0.0000000000000021	N/A	unknown function
eggNOG-mapper	UHGV-0187566_28	1151292.QEW_0364	46.6	0.00000279	N/A	N/A
PHROG	UHGV-0187566_29	phrog_366	47.6	0.00000000000024	tail fiber protein	tail
UniRef90	UHGV-0187566_29	UniRef90_UPI0018835F0C	529.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0187566_29	476272.RUMHYD_00002	90.1	6.54e-16	N/A	N/A
structural_annotation	UHGV-0187566_29	PF10651,NF033814	N/A	N/A	N/A	N/A
KOfam	UHGV-0187566_31	K08640	91.5	1.6e-26	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0187566_31	phrog_894	52.2	0.0000000000000092	endolysin	lysis
UniRef90	UHGV-0187566_31	UniRef90_R5EEL2	198.0	0	Putative muramoyl-pentapeptide carboxypeptidase	N/A
eggNOG-mapper	UHGV-0187566_31	931626.Awo_c26840	108.0	4.49e-27	Peptidase M15	N/A
Pfam	UHGV-0187566_31	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0187566_31	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0187566_31	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0187566_31	PF08291,PF01471,TIGR02869,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0187566_32	phrog_937	62.8	6.1e-18	hemolysin	other
PHROG	UHGV-0187566_33	phrog_774	69.1	8.6e-20	N/A	unknown function
eggNOG-mapper	UHGV-0187566_33	397290.C810_05225	87.8	1.35e-21	N/A	N/A
PHROG	UHGV-0187566_34	phrog_10091	103.0	2.1e-30	holin	lysis
UniRef90	UHGV-0187566_34	UniRef90_A0A1Y4RHF4	129.0	2.83e-37	Phage holin	N/A
eggNOG-mapper	UHGV-0187566_34	97139.C824_05950	117.0	1.68e-33	Bacteriophage holin	N/A
Pfam	UHGV-0187566_34	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0187566_34	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0187566_34	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0187566_34	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0187566_35	PF01047,MF_00620,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-0187566_39	K14059	120.9	7.8e-36	int; integrase	N/A
PHROG	UHGV-0187566_39	phrog_1	149.7	2.24208e-44	integrase	integration and excision
UniRef90	UHGV-0187566_39	UniRef90_A0A3D3Y0G6	275.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0187566_39	693746.OBV_41260	234.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0187566_39	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0187566_39	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0187566_39	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0187566_40	PF13443,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0187566_41	K22300	68.8	5.2e-20	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0187566_41	phrog_8	61.5	1.9e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0187566_41	UniRef90_UPI001C00E824	57.0	0.00000021	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0187566_41	1504823.CCMM01000010_gene1370	65.1	0.000000000205	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-0187566_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0187566_41	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
UniRef90	UHGV-0187566_42	UniRef90_UPI001D0E690A	77.0	3.3e-17	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0187566_42	796940.HMPREF9628_01560	58.9	0.0000000000739	N/A	N/A
structural_annotation	UHGV-0187566_42	PF05339,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0187566_46	phrog_14088	42.0	0.0000000000095	N/A	unknown function
UniRef90	UHGV-0187566_46	UniRef90_UPI001655B004	63.5	0.00000000000605	carboxypeptidase	N/A
eggNOG-mapper	UHGV-0187566_46	642492.Clole_1841	52.4	0.0000000257	N/A	N/A
structural_annotation	UHGV-0187566_49	PF08962,PF07653,COG2388	N/A	N/A	N/A	N/A
KOfam	UHGV-0187566_51	K07699	52.9	0.000000000000005	spo0A; two-component system, response regulator, stage 0 sporulation protein A	N/A
UniRef90	UHGV-0187566_51	UniRef90_A0A354MSK6	61.6	0.00000000207	Spo0A_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0187566_51	718252.FP2_08180	57.4	0.0000000429	May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process	N/A
Pfam	UHGV-0187566_51	PF08769	N/A	N/A	Sporulation initiation factor Spo0A C terminal	Spo0A_C
COG	UHGV-0187566_51	COG0745	N/A	N/A	DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain	N/A
structural_annotation	UHGV-0187566_51	PF08769,TIGR02875	N/A	N/A	N/A	N/A
Pfam	UHGV-0187566_52	PF06827	N/A	N/A	Zinc finger found in FPG and IleRS	zf-FPG_IleRS
PHROG	UHGV-0187566_53	phrog_674	106.7	1.5e-31	N/A	unknown function
UniRef90	UHGV-0187566_53	UniRef90_A0A7X9JQ21	115.0	4.82e-27	N/A	N/A
eggNOG-mapper	UHGV-0187566_53	1408437.JNJN01000039_gene373	113.0	1.2e-26	N/A	N/A
Pfam	UHGV-0187566_53	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0187566_53	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-0187566_54	phrog_3657	340.8	0	N/A	unknown function
UniRef90	UHGV-0187566_54	UniRef90_UPI001DC4E782	275.0	0	PD-(D/E)XK nuclease-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0187566_54	411461.DORFOR_00020	288.0	0	N/A	N/A
KOfam	UHGV-0187566_55	K06167	50.8	0.000000000000025	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-0187566_55	phrog_392	101.6	1.1e-29	metal-dependent hydrolase	other
UniRef90	UHGV-0187566_55	UniRef90_A0A350XZ09	158.0	8.40779e-45	Lactamase_B domain-containing protein	N/A
eggNOG-mapper	UHGV-0187566_55	665956.HMPREF1032_03101	155.0	1.12104e-44	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
Pfam	UHGV-0187566_55	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
COG	UHGV-0187566_55	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0187566_55	PF12706,MF_01818,TIGR03307,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-0187566_56	phrog_15768	50.8	3.8e-21	N/A	unknown function
UniRef90	UHGV-0187566_56	UniRef90_R6RVQ1	100.0	7.76e-22	Chromosome segregation ATPases	N/A
eggNOG-mapper	UHGV-0187566_56	1121344.JHZO01000003_gene982	113.0	8.2e-28	N/A	N/A
AcrCatalog	UHGV-0187566_56	cluster_14472	73.6	2.64e-17	NA	N/A
Pfam	UHGV-0187566_56	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0187566_56	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0187566_57	phrog_9804	147.4	7.56701e-44	N/A	unknown function
UniRef90	UHGV-0187566_57	UniRef90_A0A3D1LDS2	171.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0187566_57	1121344.JHZO01000003_gene981	163.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0187566_57	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0187566_57	PF11417	N/A	N/A	N/A	N/A