UHGV-0192710 (vOTU-004140)

Viral Genome: UHGV-0192710

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0192710
vOTU ID	vOTU-004140
Representative Genome?	Yes
Source	CHVD
Original Genome ID	SAMN09781741_a1_ct8940@circular@Podoviridae__sp._ct6Jr940
Associated Biosample	SAMN09781741
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	6
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9754
Viral Hallmark Genes (geNomad)	2
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	10.64
Jumbo Phage?	No

Genome Content
Length (bps)	63,249
GC Content	42.76%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	63
CDS Density	93%
Average CDS Length (bps)	934.81
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0192710_1	PF19765	N/A	N/A	N/A	N/A
KOfam	UHGV-0192710_2	K04763	75.0	1.2e-21	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0192710_2	phrog_1	89.0	6.1e-26	integrase	integration and excision
UniRef90	UHGV-0192710_2	UniRef90_UPI001C44D5B2	651.0	0	phage integrase SAM-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0192710_2	679191.HMPREF9018_0670	434.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0192710_2	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
COG	UHGV-0192710_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0192710_2	PF13102,PF17293,NF007246,COG4973	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0192710_4	1336803.PHEL49_0023	48.9	0.00000588	N/A	N/A
eggNOG-mapper	UHGV-0192710_6	1227276.HMPREF9148_00167	56.2	0.000000123	N/A	N/A
PHROG	UHGV-0192710_8	phrog_10089	159.2	0	DarB-like antirestriction	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0192710_8	UniRef90_UPI001F3AF089	7427.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0192710_8	997353.HMPREF9144_0995	270.0	0	acetyltransferase	N/A
Pfam	UHGV-0192710_8	PF18823	N/A	N/A	Inorganic Pyrophosphatase	InPase
Pfam	UHGV-0192710_8	PF18810	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease2	PBECR2
Pfam	UHGV-0192710_8	PF18838	N/A	N/A	Large polyvalent protein associated domain 23	LPD23
COG	UHGV-0192710_8	COG0454	N/A	N/A	N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2)	N/A
structural_annotation	UHGV-0192710_9	TIGR01689,COG0241	N/A	N/A	N/A	N/A
PHROG	UHGV-0192710_10	phrog_156	142.7	1.49939e-42	portal protein	head and packaging
eggNOG-mapper	UHGV-0192710_10	742817.HMPREF9449_01798	205.0	0	N/A	N/A
structural_annotation	UHGV-0192710_10	PF16510,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0192710_12	phrog_2	83.9	2.4e-24	terminase large subunit	head and packaging
UniRef90	UHGV-0192710_12	UniRef90_A0A413BQF7	1461.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0192710_12	1121098.HMPREF1534_01124	499.0	0	Mu-like prophage FluMu protein gp28	N/A
COG	UHGV-0192710_12	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-0192710_12	PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0192710_13	PF01694,MF_01594,NF008155,COG0705	N/A	N/A	N/A	N/A
PHROG	UHGV-0192710_15	phrog_22323	67.3	9.2e-20	N/A	unknown function
eggNOG-mapper	UHGV-0192710_15	1347393.HG726020_gene1830	54.3	0.00000878	N/A	N/A
PHROG	UHGV-0192710_16	phrog_26635	175.9	0	N/A	unknown function
UniRef90	UHGV-0192710_16	UniRef90_UPI001C38231A	238.0	0	N/A	N/A
eggNOG-mapper	UHGV-0192710_16	1227276.HMPREF9148_00159	214.0	0	N/A	N/A
structural_annotation	UHGV-0192710_16	PF17236,MF_04133,TIGR01554,COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0192710_18	PF17212	N/A	N/A	N/A	N/A
PHROG	UHGV-0192710_20	phrog_14959	82.2	2e-24	N/A	unknown function
UniRef90	UHGV-0192710_20	UniRef90_UPI00164A9025	330.0	0	N/A	N/A
eggNOG-mapper	UHGV-0192710_20	1287476.HMPREF1651_06160	65.1	0.000000131	N/A	N/A
structural_annotation	UHGV-0192710_20	PF08757,PF00354,PF16397,PF20579,MF_04116,NF033506,COG3291	N/A	N/A	N/A	N/A
UniRef90	UHGV-0192710_21	UniRef90_A0A4S2A786	462.0	0	N/A	N/A
eggNOG-mapper	UHGV-0192710_21	657322.FPR_22010	77.8	0.0000000000153	N/A	N/A
structural_annotation	UHGV-0192710_21	PF18957,TIGR04225	N/A	N/A	N/A	N/A
UniRef90	UHGV-0192710_25	UniRef90_A0A413BQD9	231.0	0	DNA-binding protein	N/A
structural_annotation	UHGV-0192710_25	PF05930,NF033499,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0192710_27	phrog_16490	62.3	1e-17	N/A	unknown function
UniRef90	UHGV-0192710_27	UniRef90_A0A8F1B6S5	242.0	0	Outer capsid protein/viral fiber	N/A
eggNOG-mapper	UHGV-0192710_27	762982.HMPREF9442_01201	99.4	2.86e-21	N/A	N/A
structural_annotation	UHGV-0192710_28	PF10628	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0192710_29	PF21744	N/A	N/A	N/A	N/A
PHROG	UHGV-0192710_31	phrog_15037	42.9	0.0000000000057	N/A	unknown function
UniRef90	UHGV-0192710_31	UniRef90_UPI001C46F9DA	310.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-0192710_31	563008.HMPREF0665_02457	75.9	0.00000000000000482	N/A	N/A
structural_annotation	UHGV-0192710_31	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0192710_32	K03791	198.1	0	K03791; putative chitinase	N/A
PHROG	UHGV-0192710_32	phrog_181	172.1	0	endolysin	lysis
UniRef90	UHGV-0192710_32	UniRef90_A0A413BQK3	346.0	0	Glycoside hydrolase family 19 protein	N/A
eggNOG-mapper	UHGV-0192710_32	215803.DB30_1841	163.0	4.2039e-45	Peptidoglycan-binding domain 1 protein	N/A
COG	UHGV-0192710_32	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0192710_32	PF00182,COG3179	N/A	N/A	N/A	N/A
PHROG	UHGV-0192710_36	phrog_32516	266.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0192710_36	1121098.HMPREF1534_01101	322.0	0	N/A	N/A
structural_annotation	UHGV-0192710_36	PF11134,COG3292	N/A	N/A	N/A	N/A
PHROG	UHGV-0192710_40	phrog_19572	175.9	0	N/A	unknown function
UniRef90	UHGV-0192710_40	UniRef90_UPI001C4689B9	310.0	0	N/A	N/A
eggNOG-mapper	UHGV-0192710_40	537011.PREVCOP_04244	222.0	0	N/A	N/A
Pfam	UHGV-0192710_40	PF14902	N/A	N/A	N/A	DUF4494
structural_annotation	UHGV-0192710_40	PF14902	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0192710_41	PF13069	N/A	N/A	N/A	N/A
PHROG	UHGV-0192710_44	phrog_32732	79.5	3.1e-23	N/A	unknown function
UniRef90	UHGV-0192710_44	UniRef90_UPI0018EE5327	122.0	1.03e-31	N/A	N/A
eggNOG-mapper	UHGV-0192710_44	1236504.HMPREF2132_11095	71.6	0.000000000000392	N/A	N/A
dbAPIS	UHGV-0192710_44	APIS052	N/A	N/A	N/A	N/A
KOfam	UHGV-0192710_47	K24451	346.0	0	zim; modification methylase	N/A
PHROG	UHGV-0192710_47	phrog_67	118.9	4.1e-35	DNA methyltransferase	other
UniRef90	UHGV-0192710_47	UniRef90_A0A7X7CFK6	387.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0192710_47	457424.BFAG_04701	384.0	0	DNA methylase	N/A
PADLOC	UHGV-0192710_47	MTase_II_00069	433.5	0	Type II methyltransferase	RM
Pfam	UHGV-0192710_47	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0192710_47	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0192710_47	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0192710_48	PF19716	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0192710_50	PF01775,MF_00273,NF001981,COG2157	N/A	N/A	N/A	N/A
PHROG	UHGV-0192710_51	phrog_824	93.3	1.5e-27	N/A	unknown function
UniRef90	UHGV-0192710_51	UniRef90_A0A3D6E9A8	85.5	5.6e-18	Nuclease	N/A
eggNOG-mapper	UHGV-0192710_51	1122985.HMPREF1991_01533	80.9	3.47e-17	VRR-NUC domain	N/A
eggNOG-mapper	UHGV-0192710_52	435591.BDI_0859	53.5	0.00000625	DnaD domain protein	N/A
COG	UHGV-0192710_52	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
PHROG	UHGV-0192710_54	phrog_59	112.5	2.4e-33	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0192710_54	UniRef90_UPI001C6FF17E	108.0	1.61e-26	NUMOD4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0192710_54	1423743.JCM14108_3322	86.7	6.04e-19	NUMOD4 motif	N/A
PADLOC	UHGV-0192710_54	HEase_00016	70.7	6.3e-22	homing endonuclease	RM
Pfam	UHGV-0192710_54	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
structural_annotation	UHGV-0192710_54	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-0192710_56	phrog_6234	43.8	0.0000000000025	host RecBCD nuclease inhibitor	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-0192710_58	999419.HMPREF1077_02928	64.7	0.00000000000319	N/A	N/A
structural_annotation	UHGV-0192710_58	NF033787	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0192710_59	999419.HMPREF1077_02927	66.6	0.0000000000000519	N/A	N/A
structural_annotation	UHGV-0192710_60	PF13783,MF_01054	N/A	N/A	N/A	N/A
UniRef90	UHGV-0192710_62	UniRef90_A0A413BGY1	287.0	0	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0192710_62	709991.Odosp_3613	79.3	2.66e-16	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0192710_62	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0192710_62	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0192710_63	UniRef90_UPI001657318B	167.0	1.37327e-43	restriction endonuclease	N/A
Pfam	UHGV-0192710_63	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-0192710_63	COG1787	N/A	N/A	Endonuclease, HJR/Mrr/RecB family	N/A
structural_annotation	UHGV-0192710_63	PF04471,MF_00722,NF003270,COG1787	N/A	N/A	N/A	N/A