UHGV-0194001 (vOTU-011359)

Viral Genome: UHGV-0194001

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0194001
vOTU ID	vOTU-011359
Representative Genome?	Yes
Source	CHVD
Original Genome ID	SAMN00792086_a1_ct58000_vs1@linear@Podoviridae__sp._ctsA81
Associated Biosample	SAMN00792086
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	99.9 (High-quality)
Trimmed?	No
CheckV Viral Markers	13
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9771
Viral Hallmark Genes (geNomad)	3
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	20.3
Jumbo Phage?	No

Genome Content
Length (bps)	65,000
GC Content	42.96%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	70
CDS Density	92%
Average CDS Length (bps)	852.69
Total tRNA Genes	2
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0194001_1	435591.BDI_1032	57.8	0.0000000011	N/A	N/A
COG	UHGV-0194001_1	COG0642	N/A	N/A	Signal transduction histidine kinase	N/A
UniRef90	UHGV-0194001_2	UniRef90_A0A1Q6FH58	151.0	2.10195e-44	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0194001_2	272559.BF9343_2315	51.2	0.00000443	N/A	N/A
eggNOG-mapper	UHGV-0194001_3	1121098.HMPREF1534_01070	90.1	2.42e-22	N/A	N/A
structural_annotation	UHGV-0194001_3	NF033787	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0194001_7	PF18822	N/A	N/A	N/A	N/A
PHROG	UHGV-0194001_8	phrog_3878	41.4	0.000000000024	N/A	unknown function
UniRef90	UHGV-0194001_8	UniRef90_Q5LCZ1	85.5	5.3e-19	Putative membrane protein	N/A
eggNOG-mapper	UHGV-0194001_8	272559.BF9343_2239	85.5	8.9e-20	N/A	N/A
PHROG	UHGV-0194001_11	phrog_15773	61.6	1e-17	N/A	unknown function
UniRef90	UHGV-0194001_11	UniRef90_UPI001E50B81C	189.0	0	N/A	N/A
KOfam	UHGV-0194001_12	K19171	70.2	1.4e-22	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-0194001_12	phrog_77	227.8	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0194001_12	UniRef90_UPI001BD963DD	346.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0194001_12	1121285.AUFK01000002_gene9	339.0	0	nuclear chromosome segregation	N/A
COG	UHGV-0194001_12	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0194001_12	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
PHROG	UHGV-0194001_13	phrog_561	182.8	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0194001_13	UniRef90_UPI001600306B	241.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-0194001_13	457424.BFAG_02389	269.0	0	N/A	N/A
Pfam	UHGV-0194001_13	PF03837	N/A	N/A	RecT family	RecT
structural_annotation	UHGV-0194001_13	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-0194001_14	K12574	42.6	0.0000000000042	rnj; ribonuclease J [EC:3.1.-.-]	N/A
PHROG	UHGV-0194001_14	phrog_392	196.2	0	metal-dependent hydrolase	other
UniRef90	UHGV-0194001_14	UniRef90_A0A7K0H759	501.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-0194001_14	457424.BFAG_02390	235.0	0	Metallo-beta-lactamase superfamily	N/A
Pfam	UHGV-0194001_14	PF00753	N/A	N/A	Metallo-beta-lactamase superfamily	Lactamase_B
COG	UHGV-0194001_14	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0194001_14	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-0194001_15	phrog_72	41.2	0.000000000025	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0194001_15	1235788.C802_00052	114.0	2.32e-30	N/A	N/A
structural_annotation	UHGV-0194001_15	NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0194001_16	phrog_19572	179.1	0	N/A	unknown function
UniRef90	UHGV-0194001_16	UniRef90_A0A174LVG4	255.0	0	N/A	N/A
eggNOG-mapper	UHGV-0194001_16	435591.BDI_0545	255.0	0	Phage tail protein	N/A
Pfam	UHGV-0194001_16	PF14902	N/A	N/A	N/A	DUF4494
structural_annotation	UHGV-0194001_16	PF14902	N/A	N/A	N/A	N/A
PHROG	UHGV-0194001_17	phrog_5034	124.9	4.3e-37	NinG/ Rap DNA junction specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0194001_17	UniRef90_A0A412WPV2	188.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-0194001_17	742725.HMPREF9450_02079	173.0	0	N/A	N/A
Pfam	UHGV-0194001_17	PF05766	N/A	N/A	Bacteriophage Lambda NinG protein	NinG
COG	UHGV-0194001_17	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0194001_17	PF05766	N/A	N/A	N/A	N/A
KOfam	UHGV-0194001_18	K07451	59.0	9.6e-17	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0194001_18	phrog_2118	68.0	1.6e-19	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0194001_18	UniRef90_UPI000A10CDA8	219.0	0	N/A	N/A
eggNOG-mapper	UHGV-0194001_18	977801.F0PII1_9VIRU	112.0	1.22e-27	N/A	N/A
Pfam	UHGV-0194001_18	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
Pfam	UHGV-0194001_18	PF01844	N/A	N/A	HNH endonuclease	HNH
PHROG	UHGV-0194001_19	phrog_2562	166.0	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0194001_19	UniRef90_A0A7K0H8A4	528.0	0	N/A	N/A
eggNOG-mapper	UHGV-0194001_19	357276.EL88_03065	187.0	0	COG NOG19076 non supervised orthologous group	N/A
Pfam	UHGV-0194001_19	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0194001_19	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0194001_19	PF14297,TIGR01714	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0194001_20	761193.Runsl_1221	62.0	0.000000000366	N/A	N/A
structural_annotation	UHGV-0194001_20	PF04266,MF_00684,NF003443,COG2411	N/A	N/A	N/A	N/A
KOfam	UHGV-0194001_22	K00558	154.7	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0194001_22	phrog_363	199.7	0	DNA methyltransferase	other
UniRef90	UHGV-0194001_22	UniRef90_K5CJI9	431.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0194001_22	445970.ALIPUT_00030	177.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-0194001_22	MTase_II_00058	144.7	2.90069e-43	Type II methyltransferase	RM
Pfam	UHGV-0194001_22	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0194001_22	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0194001_22	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0194001_22	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0194001_23	471870.BACINT_00443	50.1	0.00000019	N/A	N/A
KOfam	UHGV-0194001_24	K06941	80.8	1.3e-23	rlmN; 23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]	N/A
PHROG	UHGV-0194001_24	phrog_24834	350.8	0	N/A	unknown function
UniRef90	UHGV-0194001_24	UniRef90_A0A3E4Z738	509.0	0	Fe-S-oxidoreductase	N/A
eggNOG-mapper	UHGV-0194001_24	525919.Apre_0823	342.0	0	rRNA (adenine-C2-)-methyltransferase activity	N/A
COG	UHGV-0194001_24	COG0820	N/A	N/A	Adenine C2-methylase RlmN of 23S rRNA A2503 and tRNA A37	N/A
structural_annotation	UHGV-0194001_24	MF_01849,TIGR00048,COG0820	N/A	N/A	N/A	N/A
PHROG	UHGV-0194001_25	phrog_28300	66.6	2.9e-19	N/A	unknown function
eggNOG-mapper	UHGV-0194001_25	483215.BACFIN_06266	48.9	0.00000466	N/A	N/A
structural_annotation	UHGV-0194001_25	PF13066,COG4014	N/A	N/A	N/A	N/A
UniRef90	UHGV-0194001_27	UniRef90_F3PFX8	210.0	0	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0194001_27	483216.BACEGG_01967	217.0	0	N/A	N/A
PHROG	UHGV-0194001_28	phrog_874	93.7	1.1e-27	N/A	unknown function
eggNOG-mapper	UHGV-0194001_28	762968.HMPREF9441_00541	158.0	0	N/A	N/A
structural_annotation	UHGV-0194001_28	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-0194001_30	phrog_8684	101.2	7.1e-30	N/A	unknown function
UniRef90	UHGV-0194001_30	UniRef90_A0A1Q6FH80	340.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0194001_30	435591.BDI_0866	214.0	0	YopX protein	N/A
Pfam	UHGV-0194001_30	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0194001_30	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0194001_30	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0194001_31	phrog_28300	41.4	0.0000000000078	N/A	unknown function
eggNOG-mapper	UHGV-0194001_31	483215.BACFIN_06266	47.4	0.0000056	N/A	N/A
UniRef90	UHGV-0194001_33	UniRef90_UPI00189B4653	178.0	0	N/A	N/A
eggNOG-mapper	UHGV-0194001_33	411901.BACCAC_01195	100.0	1.68e-25	N/A	N/A
Pfam	UHGV-0194001_33	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0194001_36	phrog_32516	308.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0194001_36	1121098.HMPREF1534_01101	457.0	0	N/A	N/A
structural_annotation	UHGV-0194001_36	PF11134,COG3292	N/A	N/A	N/A	N/A
PHROG	UHGV-0194001_41	phrog_156	187.2	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0194001_41	679191.HMPREF9018_0455	444.0	0	N/A	N/A
structural_annotation	UHGV-0194001_41	PF16510,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-0194001_45	UniRef90_A0A7M1RVK1	69.7	0.00000000000817	Nuclear pore complex-like protein	N/A
UniRef90	UHGV-0194001_46	UniRef90_UPI000E481466	190.0	0	N/A	N/A
eggNOG-mapper	UHGV-0194001_47	762968.HMPREF9441_00556	48.9	0.00000414	Bacterial dnaA protein helix-turn-helix	N/A
structural_annotation	UHGV-0194001_47	PF08299,NF004688	N/A	N/A	N/A	N/A
PHROG	UHGV-0194001_48	phrog_26448	83.8	1.3e-25	N/A	unknown function
eggNOG-mapper	UHGV-0194001_48	1235803.C825_05324	186.0	0	N/A	N/A
Pfam	UHGV-0194001_48	PF20647	N/A	N/A	N/A	DUF6808
structural_annotation	UHGV-0194001_48	PF20647	N/A	N/A	N/A	N/A
PHROG	UHGV-0194001_50	phrog_872	155.9	0	N/A	unknown function
UniRef90	UHGV-0194001_50	UniRef90_A0A3E4KB68	304.0	0	N/A	N/A
eggNOG-mapper	UHGV-0194001_50	1122971.BAME01000039_gene3564	380.0	0	N/A	N/A
Pfam	UHGV-0194001_50	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-0194001_50	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-0194001_50	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-0194001_51	phrog_873	128.4	4.9e-38	endolysin	head and packaging
UniRef90	UHGV-0194001_51	UniRef90_A0A496CV20	254.0	0	Structural protein P5	N/A
eggNOG-mapper	UHGV-0194001_51	435591.BDI_0904	230.0	0	N/A	N/A
PHROG	UHGV-0194001_52	phrog_15037	51.0	0.000000000000017	N/A	unknown function
UniRef90	UHGV-0194001_52	UniRef90_UPI0015E74944	76.3	0.0000000000000157	phage holin family protein	N/A
eggNOG-mapper	UHGV-0194001_52	742766.HMPREF9455_03105	114.0	4.2e-30	N/A	N/A
structural_annotation	UHGV-0194001_52	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0194001_53	866536.Belba_1191	73.9	0.0000000000133	lipolytic protein G-D-S-L family	N/A
COG	UHGV-0194001_53	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
PHROG	UHGV-0194001_55	phrog_20787	56.3	2.4e-17	virion structural protein	head and packaging
UniRef90	UHGV-0194001_55	UniRef90_UPI001BDF6171	772.0	0	right-handed parallel beta-helix repeat-containing protein	N/A
eggNOG-mapper	UHGV-0194001_55	449673.BACSTE_02041	118.0	4.93e-24	Leucine-rich repeat (LRR) protein	N/A
COG	UHGV-0194001_55	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
PHROG	UHGV-0194001_56	phrog_22135	66.2	4.9e-19	N/A	unknown function
structural_annotation	UHGV-0194001_56	PF17212	N/A	N/A	N/A	N/A
PHROG	UHGV-0194001_58	phrog_26635	65.1	4.5e-19	N/A	unknown function
UniRef90	UHGV-0194001_58	UniRef90_R7DGV7	91.7	4.44e-16	BIG2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0194001_58	742726.HMPREF9448_00705	92.8	3.4e-17	N/A	N/A
structural_annotation	UHGV-0194001_58	PF17236,MF_04133,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0194001_59	phrog_22323	114.0	1.6e-33	N/A	unknown function
eggNOG-mapper	UHGV-0194001_59	563031.HMPREF0666_01148	125.0	1.31e-32	N/A	N/A
UniRef90	UHGV-0194001_61	UniRef90_A0A173VHX4	311.0	0	Rhomboid domain-containing protein	N/A
Pfam	UHGV-0194001_61	PF01694	N/A	N/A	Rhomboid family	Rhomboid
structural_annotation	UHGV-0194001_61	PF01694,MF_01594,TIGR04239,COG0705	N/A	N/A	N/A	N/A
PHROG	UHGV-0194001_62	phrog_2	72.7	5.2e-21	terminase large subunit	head and packaging
UniRef90	UHGV-0194001_62	UniRef90_UPI0013E9F59E	903.0	0	terminase	N/A
eggNOG-mapper	UHGV-0194001_62	1347393.HG726020_gene1832	499.0	0	Mu-like prophage FluMu protein gp28	N/A
COG	UHGV-0194001_62	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-0194001_62	PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
UniRef90	UHGV-0194001_64	UniRef90_A0A1F6RZR6	91.3	2.7e-18	HTH HARE-type domain-containing protein	N/A
structural_annotation	UHGV-0194001_64	PF11645,PF05066,MF_00048,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0194001_65	phrog_10089	1456.7	0	DarB-like antirestriction	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0194001_65	UniRef90_UPI001F14BA06	5472.0	0	SNF2-related protein	N/A
eggNOG-mapper	UHGV-0194001_65	679191.HMPREF9018_0456	2060.0	0	helicase superfamily c-terminal domain	N/A
Pfam	UHGV-0194001_65	PF18825	N/A	N/A	Large polyvalent protein-associated domain 13	LPD13
Pfam	UHGV-0194001_65	PF18823	N/A	N/A	Inorganic Pyrophosphatase	InPase
Pfam	UHGV-0194001_65	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0194001_65	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-0194001_65	COG0454	N/A	N/A	N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2)	N/A
eggNOG-mapper	UHGV-0194001_67	1227276.HMPREF9148_00167	87.4	2.56e-19	N/A	N/A
KOfam	UHGV-0194001_70	K14056	53.0	0.0000000000000062	puuR; HTH-type transcriptional regulator, repressor for puuD	N/A
PHROG	UHGV-0194001_70	phrog_8	42.9	0.0000000000093	transcriptional regulator	transcription regulation
UniRef90	UHGV-0194001_70	UniRef90_A0A6I2NIY2	142.0	3.54529e-43	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0194001_70	435590.BVU_3426	72.0	0.00000000000000654	Helix-turn-helix domain	N/A
Pfam	UHGV-0194001_70	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0194001_70	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A