UHGV-0194472 (vOTU-047274)

Viral Genome: UHGV-0194472

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0194472
vOTU ID	vOTU-047274
Representative Genome?	Yes
Source	CHVD
Original Genome ID	SAMN09781739_a1_ct4830@circular@Siphoviridae__sp._ctxiR830
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	14
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9783
Viral Hallmark Genes (geNomad)	10
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	44.01
Jumbo Phage?	No

Genome Content
Length (bps)	42,349
GC Content	42.81%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	56
CDS Density	91%
Average CDS Length (bps)	690.38
Total tRNA Genes	1
Suppressor tRNA Genes	1

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0194472_2	phrog_7566	110.5	6.3e-33	N/A	unknown function
eggNOG-mapper	UHGV-0194472_2	411459.RUMOBE_00948	127.0	1.38e-36	N/A	N/A
PHROG	UHGV-0194472_3	phrog_15982	127.1	9.1e-38	N/A	unknown function
UniRef90	UHGV-0194472_3	UniRef90_UPI001D0741A0	749.0	0	N/A	N/A
eggNOG-mapper	UHGV-0194472_3	411459.RUMOBE_00949	583.0	0	N/A	N/A
Pfam	UHGV-0194472_3	PF12961	N/A	N/A	N/A	DUF3850
COG	UHGV-0194472_3	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0194472_3	PF12961,PF11300,MF_00771,NF002615,COG2411	N/A	N/A	N/A	N/A
PHROG	UHGV-0194472_4	phrog_8470	353.4	0	N/A	unknown function
UniRef90	UHGV-0194472_4	UniRef90_UPI001D08730A	1383.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0194472_4	97139.C824_00039	908.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0194472_4	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0194472_4	PF14284	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0194472_5	411459.RUMOBE_00951	251.0	0	N/A	N/A
KOfam	UHGV-0194472_6	K03469	50.3	0.000000000000046	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0194472_6	phrog_531	46.0	0.0000000000009	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0194472_6	UniRef90_A0A173WRS0	160.0	0	Ribonuclease H	N/A
eggNOG-mapper	UHGV-0194472_6	411459.RUMOBE_00952	156.0	0	RNase H	N/A
Pfam	UHGV-0194472_6	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0194472_6	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0194472_6	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0194472_7	phrog_3584	130.5	1.2e-38	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0194472_7	411459.RUMOBE_00953	412.0	0	N/A	N/A
structural_annotation	UHGV-0194472_7	PF21578,NF041486	N/A	N/A	N/A	N/A
UniRef90	UHGV-0194472_12	UniRef90_UPI0015705952	135.0	4.29001e-40	toxin HipA	N/A
eggNOG-mapper	UHGV-0194472_12	478749.BRYFOR_05417	70.1	0.0000000000000063	N/A	N/A
UniRef90	UHGV-0194472_16	UniRef90_UPI001D0976C2	187.0	0	actin family protein	N/A
UniRef90	UHGV-0194472_17	UniRef90_UPI001D096ABA	88.2	2.69e-21	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0194472_17	1235798.C817_04758	79.7	6.96e-19	N/A	N/A
structural_annotation	UHGV-0194472_17	PF13443,NF010465,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0194472_18	UniRef90_A0A564VJX0	195.0	0	Helix-turn-helix domain protein	N/A
eggNOG-mapper	UHGV-0194472_18	1235798.C817_04757	155.0	0	N/A	N/A
COG	UHGV-0194472_18	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0194472_18	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0194472_19	1124982.MSI_9430	125.0	1.46e-36	N/A	N/A
UniRef90	UHGV-0194472_20	UniRef90_A0A416BNB5	185.0	0	N/A	N/A
eggNOG-mapper	UHGV-0194472_20	657322.FPR_11180	127.0	4.35e-37	N/A	N/A
Pfam	UHGV-0194472_20	PF13711	N/A	N/A	N/A	DUF4160
PHROG	UHGV-0194472_21	phrog_87	75.2	6.9e-22	metallo-protease	other
UniRef90	UHGV-0194472_21	UniRef90_UPI001D07A9BA	270.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0194472_21	457412.RSAG_00798	241.0	0	Zn peptidase	N/A
COG	UHGV-0194472_21	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0194472_21	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0194472_22	phrog_7395	148.0	3.22299e-44	N/A	unknown function
UniRef90	UHGV-0194472_22	UniRef90_A0A416Q226	234.0	0	N/A	N/A
eggNOG-mapper	UHGV-0194472_22	1168067.JAGP01000001_gene1216	123.0	4.63e-34	N/A	N/A
Pfam	UHGV-0194472_22	PF14015	N/A	N/A	N/A	DUF4231
NCBIFam	UHGV-0194472_22	NF033634.1	N/A	N/A	SLATT domain-containing protein	N/A
structural_annotation	UHGV-0194472_22	PF14015,NF033634	N/A	N/A	N/A	N/A
PHROG	UHGV-0194472_23	phrog_419	77.1	2.2e-24	N/A	unknown function
UniRef90	UHGV-0194472_23	UniRef90_A0A096BXT9	108.0	8.89e-30	Sugar ABC transporter substrate-binding protein	N/A
eggNOG-mapper	UHGV-0194472_23	203119.Cthe_2457	110.0	1.49e-31	N/A	N/A
structural_annotation	UHGV-0194472_23	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-0194472_24	phrog_6988	128.3	3e-38	N/A	unknown function
UniRef90	UHGV-0194472_24	UniRef90_A0A173WRJ1	276.0	0	N/A	N/A
eggNOG-mapper	UHGV-0194472_24	203119.Cthe_2456	141.0	1.90997e-41	N/A	N/A
PADLOC	UHGV-0194472_24	ThsB1_00002	41.5	0.000000000023	TIR-like	Thoeris
Pfam	UHGV-0194472_24	PF08937	N/A	N/A	Thoeris protein ThsB, TIR-like domain	ThsB_TIR
structural_annotation	UHGV-0194472_24	PF08937,MF_03036,TIGR03646,COG0758	N/A	N/A	N/A	N/A
KOfam	UHGV-0194472_25	K14059	175.0	0	int; integrase	N/A
PHROG	UHGV-0194472_25	phrog_1	152.3	4.2039e-45	integrase	integration and excision
UniRef90	UHGV-0194472_25	UniRef90_A0A173WTB3	677.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-0194472_25	1304866.K413DRAFT_1180	388.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0194472_25	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0194472_25	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0194472_25	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0194472_25	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0194472_26	phrog_4792	111.1	6.4e-33	anti-repressor	transcription regulation
UniRef90	UHGV-0194472_26	UniRef90_A0A1C5VLT1	360.0	0	ORF6N domain	N/A
eggNOG-mapper	UHGV-0194472_26	476272.RUMHYD_02879	223.0	0	ORF6N domain	N/A
Pfam	UHGV-0194472_26	PF10543	N/A	N/A	ORF6N domain	ORF6N
structural_annotation	UHGV-0194472_26	PF10543,PF13058,TIGR02681,COG3646,COG2856	N/A	N/A	N/A	N/A
UniRef90	UHGV-0194472_27	UniRef90_UPI0013798457	75.9	4.57e-17	ribbon-helix-helix protein, CopG family	N/A
eggNOG-mapper	UHGV-0194472_27	1235793.C809_02220	77.4	1.88e-18	N/A	N/A
structural_annotation	UHGV-0194472_27	PF12651,NF041793,COG4710	N/A	N/A	N/A	N/A
KOfam	UHGV-0194472_28	K07273	190.5	0	acm; lysozyme	N/A
PHROG	UHGV-0194472_28	phrog_6745	191.2	0	endolysin	lysis
UniRef90	UHGV-0194472_28	UniRef90_A0A1C5L8B5	776.0	0	Lysozyme M1	N/A
eggNOG-mapper	UHGV-0194472_28	1121115.AXVN01000006_gene2170	439.0	0	autolytic lysozime (1,4-beta-N-acetylmuramidase), family 25 of glycosyl hydrolases	N/A
Pfam	UHGV-0194472_28	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0194472_28	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0194472_28	PF01183,PF18342,PF14603,NF040678,TIGR04303,COG3757,COG3807	N/A	N/A	N/A	N/A
PHROG	UHGV-0194472_29	phrog_1129	86.3	1.9e-25	holin	lysis
UniRef90	UHGV-0194472_29	UniRef90_UPI00051B7422	150.0	2.8026e-45	phage holin family protein	N/A
eggNOG-mapper	UHGV-0194472_29	1121115.AXVN01000006_gene2171	157.0	0	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0194472_29	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0194472_29	PF16079	N/A	N/A	N/A	N/A
PHROG	UHGV-0194472_30	phrog_4105	87.6	1.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-0194472_30	411459.RUMOBE_00911	179.0	0	N/A	N/A
UniRef90	UHGV-0194472_31	UniRef90_A0A564VXL8	289.0	0	Bacterial Ig-like domain (Group 2)	N/A
structural_annotation	UHGV-0194472_31	PF01301,PF03944,MF_00279,NF040743,COG3622	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0194472_32	742733.HMPREF9469_00973	172.0	1.4013e-45	N/A	N/A
PHROG	UHGV-0194472_33	phrog_6616	865.2	0	tail protein	tail
UniRef90	UHGV-0194472_33	UniRef90_UPI00156E2BA6	1482.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0194472_33	180332.JTGN01000008_gene4059	114.0	5.41e-23	cellulase activity	N/A
COG	UHGV-0194472_33	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0194472_33	PF05113,PF02010,NF033848,NF007392,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0194472_34	phrog_1194	83.7	1.7e-24	N/A	unknown function
structural_annotation	UHGV-0194472_34	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-0194472_35	K10421	48.5	7.9e-20	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-0194472_35	phrog_1535	619.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0194472_35	UniRef90_A0A1C5P271	782.0	0	Chromosome segregation protein	N/A
eggNOG-mapper	UHGV-0194472_35	411459.RUMOBE_01384	511.0	0	phage tail tape measure protein	N/A
COG	UHGV-0194472_35	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0194472_36	phrog_706	142.5	2.49992e-42	N/A	unknown function
UniRef90	UHGV-0194472_36	UniRef90_UPI00156F1927	351.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0194472_36	476272.RUMHYD_01784	202.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0194472_36	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0194472_36	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0194472_37	phrog_11299	156.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0194472_37	33035.JPJF01000106_gene3125	104.0	1.48e-26	N/A	N/A
structural_annotation	UHGV-0194472_37	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0194472_38	phrog_3099	147.4	6.86636e-44	N/A	unknown function
eggNOG-mapper	UHGV-0194472_38	476272.RUMHYD_01782	224.0	0	N/A	N/A
structural_annotation	UHGV-0194472_38	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0194472_39	phrog_3266	120.5	8.5e-36	tail completion	connector
eggNOG-mapper	UHGV-0194472_39	663278.Ethha_0098	58.2	0.0000000104	N/A	N/A
structural_annotation	UHGV-0194472_39	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0194472_40	phrog_556	70.5	2e-20	minor head protein	head and packaging
UniRef90	UHGV-0194472_40	UniRef90_UPI00156EFCF3	290.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0194472_40	1449050.JNLE01000003_gene3886	73.6	0.0000000000000138	N/A	N/A
Pfam	UHGV-0194472_40	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0194472_40	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0194472_41	phrog_3366	115.5	3.4e-34	N/A	unknown function
eggNOG-mapper	UHGV-0194472_41	645991.Sgly_0343	53.1	0.000000533	N/A	N/A
Pfam	UHGV-0194472_41	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0194472_41	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0194472_42	phrog_541	96.9	1.6e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-0194472_42	1304866.K413DRAFT_3039	75.9	6.19e-16	N/A	N/A
PHROG	UHGV-0194472_43	phrog_10	186.9	0	major head protein	head and packaging
UniRef90	UHGV-0194472_43	UniRef90_UPI00157128C8	645.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0194472_43	411461.DORFOR_00744	548.0	0	COG NOG20168 non supervised orthologous group	N/A
Pfam	UHGV-0194472_43	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0194472_43	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0194472_43	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0194472_43	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0194472_44	phrog_2303	111.4	9.7e-33	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0194472_44	411462.DORLON_00787	177.0	0	N/A	N/A
structural_annotation	UHGV-0194472_44	PF10788,MF_02110	N/A	N/A	N/A	N/A
KOfam	UHGV-0194472_45	K07584	61.9	1.3e-17	N/A	N/A
PHROG	UHGV-0194472_45	phrog_4478	77.6	1.2e-22	peptidase	other
UniRef90	UHGV-0194472_45	UniRef90_UPI00156D7F8B	162.0	0	ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0194472_45	411461.DORFOR_00746	112.0	1.96e-31	Pfam:Peptidase_C108	N/A
Pfam	UHGV-0194472_45	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0194472_45	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0194472_45	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0194472_46	phrog_27009	118.5	2.4e-35	N/A	unknown function
PHROG	UHGV-0194472_47	phrog_15041	133.8	2.9e-40	N/A	unknown function
eggNOG-mapper	UHGV-0194472_47	1304866.K413DRAFT_0808	50.8	0.000000222	N/A	N/A
structural_annotation	UHGV-0194472_47	PF10827	N/A	N/A	N/A	N/A
PHROG	UHGV-0194472_48	phrog_581	309.4	0	minor head protein	head and packaging
UniRef90	UHGV-0194472_48	UniRef90_UPI00156DA0DB	902.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0194472_48	1235799.C818_04219	382.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0194472_48	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0194472_48	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0194472_48	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0194472_49	phrog_533	402.6	0	portal protein	head and packaging
UniRef90	UHGV-0194472_49	UniRef90_UPI001D0867C2	925.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0194472_49	411461.DORFOR_00749	655.0	0	COG NOG25118 non supervised orthologous group	N/A
Pfam	UHGV-0194472_49	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0194472_49	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0194472_50	K06909	166.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0194472_50	phrog_10250	101.0	6.8e-30	N/A	unknown function
UniRef90	UHGV-0194472_50	UniRef90_UPI0018985A97	727.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0194472_50	411461.DORFOR_00750	632.0	0	COG COG1783 Phage terminase large subunit	N/A
Pfam	UHGV-0194472_50	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0194472_50	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
COG	UHGV-0194472_50	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0194472_50	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0194472_51	phrog_509	299.1	0	terminase small subunit	head and packaging
UniRef90	UHGV-0194472_51	UniRef90_UPI001D07E0EA	500.0	0	phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0194472_51	1120998.AUFC01000030_gene2230	240.0	0	DNA packaging	N/A
Pfam	UHGV-0194472_51	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
NCBIFam	UHGV-0194472_51	NF040601.1	N/A	N/A	phage terminase small subunit	N/A
COG	UHGV-0194472_51	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0194472_51	NF040601,COG5484	N/A	N/A	N/A	N/A
PHROG	UHGV-0194472_52	phrog_36	80.0	2.8e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0194472_52	UniRef90_UPI001571211B	206.0	0	N/A	N/A
eggNOG-mapper	UHGV-0194472_52	1123075.AUDP01000020_gene1515	115.0	1.02e-30	sigma factor activity	N/A
COG	UHGV-0194472_52	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0194472_52	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-0194472_53	K22300	45.1	0.0000000000019	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0194472_53	phrog_8	43.3	0.000000000008	transcriptional regulator	transcription regulation
UniRef90	UHGV-0194472_53	UniRef90_UPI001D08C917	266.0	0	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0194472_53	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0194472_53	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
PHROG	UHGV-0194472_55	phrog_924	41.3	0.000000000027	N/A	unknown function
UniRef90	UHGV-0194472_55	UniRef90_UPI001D08C68F	291.0	0	N/A	N/A
eggNOG-mapper	UHGV-0194472_55	1256908.HMPREF0373_00667	92.8	2.14e-22	N/A	N/A
Pfam	UHGV-0194472_55	PF04448	N/A	N/A	N/A	DUF551
UniRef90	UHGV-0194472_56	UniRef90_UPI001D0718C8	107.0	6.8e-30	Lar family restriction alleviation protein	N/A