UHGV-0196735 (vOTU-119024)

Viral Genome: UHGV-0196735

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0196735
vOTU ID	vOTU-119024
Representative Genome?	Yes
Source	CHVD
Original Genome ID	SAMN09781733_a1_ct40993_vs1@Siphoviridae__sp._ctgtY1
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	51.13 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	14
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9832
Viral Hallmark Genes (geNomad)	11
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	11.91
Jumbo Phage?	No

Genome Content
Length (bps)	17,459
GC Content	60.52%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	22
CDS Density	98%
Average CDS Length (bps)	775.50
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 51.13)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0196735_2	K03497	44.4	0.0000000000022	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0196735_2	phrog_498	167.0	0	DNA methyltransferase	other
UniRef90	UHGV-0196735_2	UniRef90_A0A810PZK9	287.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0196735_2	1423758.BN55_01455	164.0	0	DNA methylase	N/A
PADLOC	UHGV-0196735_2	MTase_II_00015	117.6	1.3e-34	Type II methyltransferase	RM
Pfam	UHGV-0196735_2	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0196735_2	COG0863	N/A	N/A	DNA modification methylase	N/A
KOfam	UHGV-0196735_3	K07319	63.2	4.2e-18	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0196735_3	phrog_498	101.8	8.9e-30	DNA methyltransferase	other
UniRef90	UHGV-0196735_3	UniRef90_A0A1H3NT25	93.6	8.77e-23	DNA methylase	N/A
eggNOG-mapper	UHGV-0196735_3	1423758.BN55_01455	118.0	5.65e-31	DNA methylase	N/A
PADLOC	UHGV-0196735_3	MTase_II_00015	84.7	1.7e-24	Type II methyltransferase	RM
Pfam	UHGV-0196735_3	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0196735_3	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0196735_3	PF12847,TIGR02469	N/A	N/A	N/A	N/A
PHROG	UHGV-0196735_4	phrog_5110	60.8	1.4e-17	terminase small subunit	head and packaging
UniRef90	UHGV-0196735_4	UniRef90_UPI00195E8788	125.0	1.17e-33	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0196735_4	1265845.PWEIH_00610	52.4	0.00000277	Phage terminase, small subunit	N/A
Pfam	UHGV-0196735_4	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0196735_4	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0196735_5	phrog_9	239.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0196735_5	UniRef90_UPI0018737C02	908.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0196735_5	1235792.C808_00083	608.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0196735_5	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0196735_5	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0196735_5	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0196735_6	phrog_12	116.0	1.1e-34	portal protein	head and packaging
UniRef90	UHGV-0196735_6	UniRef90_UPI0018755FA4	502.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0196735_6	610130.Closa_0742	291.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0196735_6	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0196735_6	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0196735_6	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0196735_6	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0196735_7	K01358	136.3	2.8e-40	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0196735_7	phrog_94	253.6	0	head maturation protease	head and packaging
UniRef90	UHGV-0196735_7	UniRef90_A0A1Y4BT12	350.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0196735_7	349161.Dred_2605	303.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0196735_7	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0196735_7	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0196735_7	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0196735_8	phrog_10	140.6	1.6e-41	major head protein	head and packaging
UniRef90	UHGV-0196735_8	UniRef90_G9YSC0	689.0	0	Cadherin-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0196735_8	1235792.C808_00086	416.0	0	Phage capsid family	N/A
Pfam	UHGV-0196735_8	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0196735_8	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0196735_8	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0196735_8	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0196735_8	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0196735_9	phrog_749	68.0	1.1e-19	N/A	unknown function
UniRef90	UHGV-0196735_9	UniRef90_UPI001C0FB8A8	53.9	0.000000246	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0196735_9	349161.Dred_2603	78.2	1.56e-17	N/A	N/A
PHROG	UHGV-0196735_10	phrog_19734	123.7	9.3e-37	N/A	unknown function
UniRef90	UHGV-0196735_10	UniRef90_A0A6I7GNS7	132.0	3.09e-37	Phage head closure protein	N/A
eggNOG-mapper	UHGV-0196735_10	349161.Dred_2602	89.7	1.82e-21	N/A	N/A
structural_annotation	UHGV-0196735_10	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0196735_11	999413.HMPREF1094_02005	82.8	5.57e-19	N/A	N/A
structural_annotation	UHGV-0196735_11	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0196735_12	phrog_5	43.3	0.000000000008	tail completion or Neck1 protein	connector
UniRef90	UHGV-0196735_12	UniRef90_A0A1C6FG30	137.0	2.59e-38	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0196735_12	908340.HMPREF9406_2573	133.0	1.19e-37	N/A	N/A
structural_annotation	UHGV-0196735_12	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0196735_13	phrog_88	93.1	3e-27	major tail protein	tail
UniRef90	UHGV-0196735_13	UniRef90_A0A1C6CIL7	134.0	3.84e-35	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0196735_13	33035.JPJF01000039_gene278	73.2	0.000000000000293	N/A	N/A
NCBIFam	UHGV-0196735_13	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0196735_13	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0196735_16	phrog_6900	238.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0196735_16	UniRef90_A0A1E3BXP9	301.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0196735_16	1216932.CM240_0625	304.0	0	tape measure	N/A
COG	UHGV-0196735_16	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0196735_16	PF05537,MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0196735_17	phrog_33	64.7	2.1e-18	distal tail protein Dit	tail
UniRef90	UHGV-0196735_17	UniRef90_A0A173Z1X4	186.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0196735_17	536233.CLO_0897	95.1	5.3e-21	tail component	N/A
COG	UHGV-0196735_17	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0196735_17	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0196735_18	phrog_1067	277.6	0	minor head protein	head and packaging
UniRef90	UHGV-0196735_18	UniRef90_A0A316NPB5	382.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0196735_18	1123263.AUKY01000068_gene489	293.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0196735_18	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0196735_18	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0196735_18	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0196735_18	PF14594,PF13884,TIGR01665,COG4926	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0196735_19	1408437.JNJN01000002_gene1389	62.4	0.000000103	N/A	N/A
structural_annotation	UHGV-0196735_19	PF10651,TIGR02059	N/A	N/A	N/A	N/A
PHROG	UHGV-0196735_20	phrog_4105	100.5	9.7e-30	N/A	unknown function
UniRef90	UHGV-0196735_20	UniRef90_A0A8D9UHA9	140.0	3.20001e-41	Holin protein	N/A
eggNOG-mapper	UHGV-0196735_20	742733.HMPREF9469_05011	117.0	5.98e-33	N/A	N/A
PHROG	UHGV-0196735_21	phrog_881	89.5	1.7e-26	holin	lysis
UniRef90	UHGV-0196735_21	UniRef90_UPI00189D3A4F	85.9	1.82e-20	phage holin	N/A
eggNOG-mapper	UHGV-0196735_21	742740.HMPREF9474_02251	83.2	3.95e-20	Putative phage holin Dp-1	N/A
Pfam	UHGV-0196735_21	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0196735_21	PF16938,COG3237	N/A	N/A	N/A	N/A
KOfam	UHGV-0196735_22	K01448	49.0	0.000000000000087	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0196735_22	phrog_435	68.6	1.2e-19	endolysin	lysis
UniRef90	UHGV-0196735_22	UniRef90_A0A810PUG7	209.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-0196735_22	994573.T472_0212035	79.0	0.00000000000000884	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0196735_22	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0196735_22	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0196735_22	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0196735_22	PF01520,PF01471,MF_00562,TIGR02883,TIGR03979,COG0860,COG3409	N/A	N/A	N/A	N/A