UHGV-0197148 (vOTU-100235)

Viral Genome: UHGV-0197148

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0197148
vOTU ID	vOTU-100235
Representative Genome?	Yes
Source	CHVD
Original Genome ID	SAMN09781722_a1_ct47485_vs1@Siphoviridae__sp._ct4961
Associated Biosample	SAMN09781722
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	54.72 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	14
CheckV Host Markers	2
Recoded?	No

Viral Content
geNomad score	0.982
Viral Hallmark Genes (geNomad)	9
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	41.29
Jumbo Phage?	No

Genome Content
Length (bps)	24,241
GC Content	36.16%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	40
CDS Density	96%
Average CDS Length (bps)	584.03
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 54.72)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0197148_3	K06909	140.7	1.40004e-41	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0197148_3	phrog_10250	148.4	5.60519e-45	N/A	unknown function
UniRef90	UHGV-0197148_3	UniRef90_A0A1M6RNG9	397.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0197148_3	411490.ANACAC_00783	376.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0197148_3	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0197148_3	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0197148_3	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0197148_3	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0197148_3	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0197148_5	K09961	421.1	0	N/A	N/A
PHROG	UHGV-0197148_5	phrog_146	414.9	0	portal protein	head and packaging
UniRef90	UHGV-0197148_5	UniRef90_A0A553KG30	457.0	0	N/A	N/A
eggNOG-mapper	UHGV-0197148_5	936573.HMPREF1147_1323	447.0	0	N/A	N/A
Pfam	UHGV-0197148_5	PF06381	N/A	N/A	Anti-CBASS protein Acb1-like	Abc1-like
NCBIFam	UHGV-0197148_5	TIGR01555.1	N/A	N/A	phage-associated protein, HI1409 family	N/A
COG	UHGV-0197148_5	COG3567	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0197148_5	PF06381,MF_04135,TIGR01555,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0197148_7	K08304	55.8	5.8e-16	mltA; membrane-bound lytic murein transglycosylase A [EC:4.2.2.-]	N/A
PHROG	UHGV-0197148_7	phrog_22529	83.8	7e-25	N/A	unknown function
UniRef90	UHGV-0197148_7	UniRef90_R8W1B6	97.8	4.29e-22	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-0197148_7	1203606.HMPREF1526_01502	97.8	7.2e-23	3D domain protein	N/A
Pfam	UHGV-0197148_7	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0197148_7	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-0197148_7	PF02185,NF040676,COG3584	N/A	N/A	N/A	N/A
UniRef90	UHGV-0197148_11	UniRef90_A1S0S0	65.9	0.00000000000462	Rubrerythrin domain-containing protein	N/A
eggNOG-mapper	UHGV-0197148_11	368408.Tpen_1655	65.9	0.000000000000776	Rubrerythrin	N/A
Pfam	UHGV-0197148_11	PF02915	N/A	N/A	Rubrerythrin	Rubrerythrin
COG	UHGV-0197148_11	COG1633	N/A	N/A	Rubrerythrin, includes spore coat protein YhjR	N/A
structural_annotation	UHGV-0197148_11	PF07875,TIGR04535,COG3461	N/A	N/A	N/A	N/A
PHROG	UHGV-0197148_13	phrog_324	161.7	0	head morphogenesis	head and packaging
UniRef90	UHGV-0197148_13	UniRef90_A0A0C3MBK6	218.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0197148_13	1211817.CCAT010000003_gene238	214.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0197148_13	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0197148_13	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0197148_13	PF06152,TIGR01641,COG2369	N/A	N/A	N/A	N/A
KOfam	UHGV-0197148_15	K09960	210.1	0	N/A	N/A
PHROG	UHGV-0197148_15	phrog_16985	219.8	0	N/A	unknown function
UniRef90	UHGV-0197148_15	UniRef90_UPI001C00F5B0	155.0	5.00964e-42	N/A	N/A
eggNOG-mapper	UHGV-0197148_15	1123288.SOV_2c10610	175.0	0	N/A	N/A
Pfam	UHGV-0197148_15	PF09979	N/A	N/A	N/A	DUF2213
COG	UHGV-0197148_15	COG3566	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0197148_15	PF09979,TIGR01543,COG3566	N/A	N/A	N/A	N/A
PHROG	UHGV-0197148_17	phrog_563	113.1	1.8e-33	virion structural protein	head and packaging
UniRef90	UHGV-0197148_17	UniRef90_A0A0U1KXM2	121.0	5.78e-32	Putative bacteriophage protein	N/A
eggNOG-mapper	UHGV-0197148_17	1196322.A370_02032	130.0	5.69e-36	N/A	N/A
structural_annotation	UHGV-0197148_17	PF09956	N/A	N/A	N/A	N/A
PHROG	UHGV-0197148_18	phrog_264	189.5	0	major head protein	head and packaging
UniRef90	UHGV-0197148_18	UniRef90_UPI00190EF81E	403.0	0	N/A	N/A
eggNOG-mapper	UHGV-0197148_18	1415774.U728_3749	377.0	0	N/A	N/A
Pfam	UHGV-0197148_18	PF09950	N/A	N/A	N/A	DUF2184
COG	UHGV-0197148_18	COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0197148_18	PF09950,MF_04113,TIGR01554,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0197148_20	phrog_302	78.9	5e-23	virion structural protein	head and packaging
UniRef90	UHGV-0197148_20	UniRef90_A0A3C2EI90	120.0	2.16e-31	N/A	N/A
eggNOG-mapper	UHGV-0197148_20	1211817.CCAT010000003_gene231	107.0	3.34e-27	N/A	N/A
Pfam	UHGV-0197148_20	PF13262	N/A	N/A	N/A	DUF4054
structural_annotation	UHGV-0197148_20	PF13262	N/A	N/A	N/A	N/A
PHROG	UHGV-0197148_21	phrog_222	100.4	1.7e-29	tail protein	tail
UniRef90	UHGV-0197148_21	UniRef90_A0A0G0PG79	103.0	7.29e-25	Bacteriophage protein	N/A
eggNOG-mapper	UHGV-0197148_21	1211817.CCAT010000003_gene230	105.0	2.97e-26	N/A	N/A
PHROG	UHGV-0197148_22	phrog_939	42.9	0.0000000000072	head protein	head and packaging
structural_annotation	UHGV-0197148_22	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0197148_23	phrog_1973	62.4	5.6e-18	N/A	unknown function
eggNOG-mapper	UHGV-0197148_23	1123288.SOV_2c10680	69.7	0.00000000000283	N/A	N/A
structural_annotation	UHGV-0197148_23	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-0197148_24	phrog_205	232.9	0	virion structural protein	head and packaging
UniRef90	UHGV-0197148_24	UniRef90_UPI001C0FEA2F	256.0	0	N/A	N/A
eggNOG-mapper	UHGV-0197148_24	1196322.A370_02025	192.0	0	N/A	N/A
Pfam	UHGV-0197148_24	PF11863	N/A	N/A	N/A	DUF3383
structural_annotation	UHGV-0197148_24	PF11863,COG3497	N/A	N/A	N/A	N/A
PHROG	UHGV-0197148_25	phrog_280	73.4	3e-21	virion structural protein	head and packaging
UniRef90	UHGV-0197148_25	UniRef90_A0A413FXL3	93.2	1.6e-21	N/A	N/A
eggNOG-mapper	UHGV-0197148_25	1123288.SOV_2c10700	104.0	1.93e-26	N/A	N/A
Pfam	UHGV-0197148_25	PF11681	N/A	N/A	Bacteriophage KPP10, Structural protein ORF10	KPP10_Orf10
structural_annotation	UHGV-0197148_25	PF11681,TIGR02241,COG5437	N/A	N/A	N/A	N/A
Pfam	UHGV-0197148_26	PF21822	N/A	N/A	Phage tail assembly chaperone protein, TAC	Phage_TAC_15
structural_annotation	UHGV-0197148_26	PF21822	N/A	N/A	N/A	N/A
PHROG	UHGV-0197148_27	phrog_22539	76.3	2.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-0197148_27	34506.g5482	60.5	0.00000108	N/A	N/A
PHROG	UHGV-0197148_28	phrog_817	122.5	2.2e-36	tail fiber protein	tail
UniRef90	UHGV-0197148_28	UniRef90_UPI0018EE58A4	150.0	2.14006e-41	fibronectin type III domain-containing protein	N/A
eggNOG-mapper	UHGV-0197148_28	1211817.CCAT010000003_gene222	125.0	1.28e-33	N/A	N/A
Pfam	UHGV-0197148_28	PF21821	N/A	N/A	Dit-like phage tail protein	Dit_like
structural_annotation	UHGV-0197148_28	PF21821,TIGR01633,COG3499	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0197148_29	1123288.SOV_2c10760	82.4	7.99e-19	N/A	N/A
KOfam	UHGV-0197148_30	K19304	118.7	5.3e-35	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-0197148_30	phrog_20677	267.7	0	N/A	unknown function
UniRef90	UHGV-0197148_30	UniRef90_A0A4Z0QZJ2	283.0	0	LYZ2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0197148_30	1123288.SOV_2c10770	240.0	0	N/A	N/A
Pfam	UHGV-0197148_30	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
structural_annotation	UHGV-0197148_30	PF01551,PF05113,MF_00664,NF033848,NF040883,COG0739,COG3500	N/A	N/A	N/A	N/A
UniRef90	UHGV-0197148_32	UniRef90_A0A0U1KX53	140.0	1.7e-38	Phage-related protein	N/A
eggNOG-mapper	UHGV-0197148_32	1123288.SOV_2c10780	140.0	2.85e-39	Baseplate assembly protein	N/A
Pfam	UHGV-0197148_32	PF18352	N/A	N/A	N/A	Gp138_N
COG	UHGV-0197148_32	COG4540	N/A	N/A	Phage P2 baseplate assembly protein gpV	N/A
structural_annotation	UHGV-0197148_32	PF18352,TIGR01644,COG4540	N/A	N/A	N/A	N/A
PHROG	UHGV-0197148_33	phrog_120	67.2	2.4e-19	baseplate protein	tail
UniRef90	UHGV-0197148_33	UniRef90_A0A8G2A2B4	67.0	0.00000000000635	Bacteriophage protein	N/A
eggNOG-mapper	UHGV-0197148_33	1196322.A370_02017	68.2	0.000000000000406	N/A	N/A
structural_annotation	UHGV-0197148_33	TIGR03357,COG3628	N/A	N/A	N/A	N/A
PHROG	UHGV-0197148_34	phrog_6	212.5	0	baseplate protein	tail
UniRef90	UHGV-0197148_34	UniRef90_UPI00156BA425	344.0	0	baseplate J/gp47 family protein	N/A
eggNOG-mapper	UHGV-0197148_34	1123288.SOV_2c10800	324.0	0	Baseplate J-like protein	N/A
Pfam	UHGV-0197148_34	PF04865	N/A	N/A	Baseplate J-like protein	Baseplate_J
COG	UHGV-0197148_34	COG3299	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0197148_34	PF04865,PF21379,MF_04102,TIGR02243,COG3299	N/A	N/A	N/A	N/A
KOfam	UHGV-0197148_35	K03465	189.3	0	thyX, thy1; thymidylate synthase (FAD) [EC:2.1.1.148]	N/A
PHROG	UHGV-0197148_35	phrog_85	129.1	2.2e-38	thymidylate synthase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0197148_35	UniRef90_A0A2A7B932	306.0	0	Thymidylate synthase (FAD)	N/A
eggNOG-mapper	UHGV-0197148_35	1307759.JOMJ01000003_gene480	271.0	0	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant	N/A
Pfam	UHGV-0197148_35	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
NCBIFam	UHGV-0197148_35	TIGR02170.1	N/A	N/A	FAD-dependent thymidylate synthase	N/A
COG	UHGV-0197148_35	COG1351	N/A	N/A	Thymidylate synthase ThyX, FAD-dependent family	N/A
structural_annotation	UHGV-0197148_35	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0197148_36	phrog_587	127.7	9.5e-39	structural protein	head and packaging
UniRef90	UHGV-0197148_36	UniRef90_UPI001F19B9FD	112.0	1.19e-27	N/A	N/A
eggNOG-mapper	UHGV-0197148_36	1437882.AZRU01000125_gene5039	101.0	2.83e-22	N/A	N/A
Pfam	UHGV-0197148_36	PF11041	N/A	N/A	N/A	DUF2612
structural_annotation	UHGV-0197148_36	PF11041,TIGR02242,COG3948	N/A	N/A	N/A	N/A
PHROG	UHGV-0197148_39	phrog_11303	40.8	0.000000000037	tail fiber protein	tail
eggNOG-mapper	UHGV-0197148_39	1123288.SOV_2c10820	67.8	0.000000000503	Phage Tail Collar Domain	N/A
COG	UHGV-0197148_39	COG4675	N/A	N/A	Phage tail collar domain	N/A