UHGV-0200965 (vOTU-136134)

Viral Genome: UHGV-0200965

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0200965
vOTU ID	vOTU-136134
Representative Genome?	Yes
Source	CHVD
Original Genome ID	SAMN05826639_a1_ct19178_vs1@linear@Myoviridae__sp._ctxf81
Associated Biosample	SAMN05826639
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	85.76 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	21
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9803
Viral Hallmark Genes (geNomad)	12
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	31.91
Jumbo Phage?	No

Genome Content
Length (bps)	29,857
GC Content	46.81%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	46
CDS Density	92%
Average CDS Length (bps)	597.59
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 85.76)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0200965_4	phrog_253	123.9	1e-36	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0200965_4	UniRef90_UPI00189A2233	303.0	0	siphovirus Gp157 family protein	N/A
eggNOG-mapper	UHGV-0200965_4	447909.A6M981_9VIRU	87.0	5.25e-19	Siphovirus Gp157	N/A
Pfam	UHGV-0200965_4	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0200965_4	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_5	phrog_7838	151.8	4.2039e-45	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0200965_5	UniRef90_A0A8D9UGW3	223.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0200965_5	742767.HMPREF9456_02397	187.0	0	N/A	N/A
structural_annotation	UHGV-0200965_5	PF04098,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_6	phrog_72	50.9	0.000000000000012	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0200965_6	UniRef90_A0A2Z4Q9W9	125.0	3.07e-33	NinB	N/A
eggNOG-mapper	UHGV-0200965_6	1507.HMPREF0262_00432	135.0	9.09e-38	N/A	N/A
structural_annotation	UHGV-0200965_6	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_7	phrog_7566	76.9	1.9e-22	N/A	unknown function
eggNOG-mapper	UHGV-0200965_7	693746.OBV_24070	135.0	3.78e-40	N/A	N/A
KOfam	UHGV-0200965_8	K03111	126.3	3.9e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0200965_8	phrog_44	132.2	3.6e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0200965_8	UniRef90_A0A410Q030	192.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0200965_8	1121334.KB911069_gene1617	176.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0200965_8	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0200965_8	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0200965_8	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0200965_8	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0200965_8	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_9	phrog_9474	93.8	1.9e-27	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0200965_9	UniRef90_A0A6N8I0R4	129.0	1.79e-33	N/A	N/A
eggNOG-mapper	UHGV-0200965_9	927704.SELR_18440	103.0	8.86e-24	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
Pfam	UHGV-0200965_9	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0200965_9	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0200965_9	PF13730,NF033789,COG1846	N/A	N/A	N/A	N/A
KOfam	UHGV-0200965_10	K02314	284.4	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0200965_10	phrog_19	255.5	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0200965_10	UniRef90_A0A413FWW6	411.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0200965_10	693746.OBV_27440	207.0	0	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-0200965_10	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0200965_10	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0200965_10	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0200965_10	PF03796,PF00772,MF_04155,NF005240,COG0305	N/A	N/A	N/A	N/A
KOfam	UHGV-0200965_12	K01160	49.3	0.00000000000013	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0200965_12	phrog_4632	55.4	6.1e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0200965_12	UniRef90_A0A7X8IB41	141.0	4.33996e-41	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0200965_12	469604.HMPREF0946_00819	73.9	0.00000000000000241	N/A	N/A
Pfam	UHGV-0200965_12	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-0200965_12	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_13	phrog_1384	109.0	4e-32	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-0200965_13	1235797.C816_01664	223.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0200965_13	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_14	phrog_757	247.6	0	DNA methyltransferase	other
UniRef90	UHGV-0200965_14	UniRef90_A0A372V4B7	344.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0200965_14	485918.Cpin_3834	275.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0200965_14	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0200965_14	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_16	phrog_10714	42.5	0.0000000000097	N/A	unknown function
eggNOG-mapper	UHGV-0200965_16	537007.BLAHAN_05460	52.4	0.000000125	N/A	N/A
UniRef90	UHGV-0200965_17	UniRef90_UPI001C641777	59.7	0.0000000149	Lar family restriction alleviation protein	N/A
KOfam	UHGV-0200965_21	K01494	157.1	0	dcd; dCTP deaminase [EC:3.5.4.13]	N/A
PHROG	UHGV-0200965_21	phrog_1663	82.9	3.9e-24	dCTP deaminase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0200965_21	UniRef90_UPI00189B996D	311.0	0	dCTP deaminase	N/A
eggNOG-mapper	UHGV-0200965_21	1121334.KB911078_gene1188	278.0	0	TIGRFAM deoxycytidine triphosphate deaminase	N/A
NCBIFam	UHGV-0200965_21	TIGR02274.1	N/A	N/A	dCTP deaminase	N/A
COG	UHGV-0200965_21	COG0717	N/A	N/A	dCTP deaminase	N/A
HAMAP	UHGV-0200965_21	MF_00146	N/A	N/A	dCTP deaminase, dUMP-forming [dcd]	N/A
structural_annotation	UHGV-0200965_21	PF06559,MF_00146,TIGR02274,COG0717	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_22	phrog_874	179.8	0	N/A	unknown function
UniRef90	UHGV-0200965_22	UniRef90_A0A6N7W7Q7	199.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0200965_22	138119.DSY2193	142.0	1.13e-39	N/A	N/A
structural_annotation	UHGV-0200965_22	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_23	phrog_8684	69.5	4.9e-20	N/A	unknown function
UniRef90	UHGV-0200965_23	UniRef90_A0A373MQ88	81.6	1.84e-16	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0200965_23	762968.HMPREF9441_00543	66.6	0.00000000000988	YopX protein	N/A
Pfam	UHGV-0200965_23	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-0200965_23	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_26	phrog_36	51.1	0.000000000000025	transcriptional regulator	transcription regulation
UniRef90	UHGV-0200965_26	UniRef90_A0A7G5MSQ2	63.5	0.000000000465	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-0200965_26	1304866.K413DRAFT_1214	64.7	0.0000000000312	N/A	N/A
structural_annotation	UHGV-0200965_26	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_28	phrog_4581	80.9	1.5e-23	terminase small subunit	head and packaging
UniRef90	UHGV-0200965_28	UniRef90_A0A0F9NDL0	80.9	0.000000000000012	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-0200965_28	642492.Clole_0739	124.0	1.32e-33	HNH nucleases	N/A
Pfam	UHGV-0200965_28	PF13671	N/A	N/A	AAA domain	AAA_33
COG	UHGV-0200965_28	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0200965_28	PF13671,MF_03171,NF005251,NF008448,COG4639	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_29	phrog_361	105.0	5e-31	terminase small subunit	head and packaging
UniRef90	UHGV-0200965_29	UniRef90_A0A1F8UPJ2	144.0	2.94973e-42	Terminase	N/A
eggNOG-mapper	UHGV-0200965_29	358681.BBR47_29130	120.0	9.41e-34	Phage terminase, small subunit	N/A
Pfam	UHGV-0200965_29	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0200965_29	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0200965_29	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_30	phrog_9	304.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0200965_30	UniRef90_UPI001A9AAB24	966.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0200965_30	755731.Clo1100_0544	916.0	0	Phage Terminase	N/A
Pfam	UHGV-0200965_30	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0200965_30	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0200965_30	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0200965_30	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_31	phrog_12	158.4	0	portal protein	head and packaging
UniRef90	UHGV-0200965_31	UniRef90_A0A2V2FLD5	486.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0200965_31	396034.A6XMJ5_9CAUD	440.0	0	Phage portal protein	N/A
Pfam	UHGV-0200965_31	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0200965_31	TIGR01537.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0200965_31	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0200965_32	K06904	153.5	1.4013e-45	N/A	N/A
PHROG	UHGV-0200965_32	phrog_80	174.1	0	head maturation protease	head and packaging
UniRef90	UHGV-0200965_32	UniRef90_A0A419G204	266.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0200965_32	913865.DOT_5634	265.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0200965_32	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0200965_32	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0200965_32	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0200965_32	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_33	phrog_10	170.7	0	major head protein	head and packaging
UniRef90	UHGV-0200965_33	UniRef90_UPI00189E05D2	573.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0200965_33	913865.DOT_5633	509.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0200965_33	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0200965_33	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0200965_33	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0200965_33	COG2273	N/A	N/A	Beta-glucanase, GH16 family	N/A
structural_annotation	UHGV-0200965_33	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_34	phrog_2550	68.4	6.5e-20	N/A	unknown function
eggNOG-mapper	UHGV-0200965_34	1497679.EP56_05740	63.9	0.000000000004	N/A	N/A
structural_annotation	UHGV-0200965_34	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_35	phrog_1951	75.5	5.3e-22	head-tail adaptor	connector
eggNOG-mapper	UHGV-0200965_35	1235792.C808_03061	63.5	0.000000000012	N/A	N/A
NCBIFam	UHGV-0200965_35	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0200965_35	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_36	phrog_5	50.7	0.000000000000043	tail completion or Neck1 protein	connector
UniRef90	UHGV-0200965_36	UniRef90_UPI00189AD9B8	262.0	0	HK97 gp10 family phage protein	N/A
Pfam	UHGV-0200965_36	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0200965_36	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0200965_36	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_37	phrog_78	45.5	0.0000000000015	tail terminator	connector
eggNOG-mapper	UHGV-0200965_37	935948.KE386495_gene1329	60.8	0.000000000218	N/A	N/A
structural_annotation	UHGV-0200965_37	PF05657,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_38	phrog_88	85.6	4.8e-25	major tail protein	tail
UniRef90	UHGV-0200965_38	UniRef90_UPI00189BD00F	540.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0200965_38	349161.Dred_2600	83.2	7.92e-16	N/A	N/A
Pfam	UHGV-0200965_38	PF13205	N/A	N/A	Bacterial Ig-like domain	Big_5
NCBIFam	UHGV-0200965_38	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0200965_38	PF04630,PF13205,TIGR01603,NF033814,COG2372,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_39	phrog_2115	44.9	0.0000000000023	tail protein	tail
structural_annotation	UHGV-0200965_39	PF11836	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0200965_40	931626.Awo_c24000	110.0	3.24e-27	N/A	N/A
structural_annotation	UHGV-0200965_40	COG3758	N/A	N/A	N/A	N/A
KOfam	UHGV-0200965_41	K12478	40.4	0.0000000000096	EEA1; early endosome antigen 1	N/A
PHROG	UHGV-0200965_41	phrog_8462	138.4	1.29998e-41	tail length tape measure protein	tail
UniRef90	UHGV-0200965_41	UniRef90_A0A174XMM8	342.0	0	Tail tape measure protein TP901 core region	N/A
eggNOG-mapper	UHGV-0200965_41	1195236.CTER_5104	324.0	0	nuclear chromosome segregation	N/A
COG	UHGV-0200965_41	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0200965_41	TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_42	phrog_37549	60.1	1.1e-17	virion structural protein	head and packaging
UniRef90	UHGV-0200965_42	UniRef90_A0A5C5STC3	91.3	0.00000000000000233	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-0200965_42	1195236.CTER_5103	97.1	4.87e-18	N/A	N/A
structural_annotation	UHGV-0200965_42	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_43	phrog_26795	99.1	1.5e-30	N/A	unknown function
eggNOG-mapper	UHGV-0200965_43	1382315.JPOI01000001_gene271	157.0	6.26941e-42	N/A	N/A
structural_annotation	UHGV-0200965_43	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0200965_44	phrog_26792	44.9	0.000000000002	N/A	unknown function
eggNOG-mapper	UHGV-0200965_45	391937.NA2_19818	54.3	0.00000589	N/A	N/A