UHGV-0201822 (vOTU-152388)

Viral Genome: UHGV-0201822

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0201822
vOTU ID	vOTU-152388
Representative Genome?	Yes
Source	CHVD
Original Genome ID	SAMN03418278_a1_ct52424_vs1@Siphoviridae__sp._ctxyr1
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	50.5 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	12
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.979
Viral Hallmark Genes (geNomad)	8
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	12.33
Jumbo Phage?	No

Genome Content
Length (bps)	19,383
GC Content	45.52%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	29
CDS Density	95%
Average CDS Length (bps)	637.14
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 50.5)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0201822_2	K06223	212.9	0	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-0201822_2	phrog_56	167.1	0	DNA methyltransferase	other
UniRef90	UHGV-0201822_2	UniRef90_A0A413Z5T1	454.0	0	DNA adenine methylase	N/A
eggNOG-mapper	UHGV-0201822_2	1511.CLOST_1547	329.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-0201822_2	MTase_II_00030	249.3	0	Type II methyltransferase	RM
Pfam	UHGV-0201822_2	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-0201822_2	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-0201822_2	PF02086,MF_01872,NF008152,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-0201822_5	phrog_478	126.9	8.1e-38	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0201822_5	UniRef90_A0A373Q857	174.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0201822_5	1111121.HMPREF1247_0834	94.7	3.4e-23	N/A	N/A
UniRef90	UHGV-0201822_6	UniRef90_A0A6L5YG37	104.0	3.48e-27	N/A	N/A
PHROG	UHGV-0201822_7	phrog_8684	85.3	7.7e-26	N/A	unknown function
UniRef90	UHGV-0201822_7	UniRef90_A0A3R6DZN9	140.0	2.83001e-40	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0201822_7	742733.HMPREF9469_00912	84.3	4.79e-19	YopX protein	N/A
Pfam	UHGV-0201822_7	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0201822_7	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0201822_7	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0201822_8	phrog_38832	40.2	0.000000000025	N/A	unknown function
UniRef90	UHGV-0201822_8	UniRef90_A0A415TX35	66.2	0.0000000000851	BAH domain-containing protein	N/A
eggNOG-mapper	UHGV-0201822_8	1235790.C805_00035	67.0	0.00000000000377	N/A	N/A
UniRef90	UHGV-0201822_9	UniRef90_UPI001C02F342	128.0	1.63e-34	N/A	N/A
PHROG	UHGV-0201822_13	phrog_36	65.5	9.4e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0201822_13	UniRef90_A0A3D3U8Q6	151.0	1.12104e-44	Sigma70_r4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0201822_13	1256908.HMPREF0373_00671	123.0	2.28e-34	N/A	N/A
structural_annotation	UHGV-0201822_13	PF04545,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0201822_14	K07474	126.2	3.9e-37	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0201822_14	phrog_51	138.8	2.70002e-41	terminase small subunit	head and packaging
UniRef90	UHGV-0201822_14	UniRef90_A0A1M7MX16	214.0	0	Phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0201822_14	1298920.KI911353_gene4857	188.0	0	Terminase small subunit	N/A
Pfam	UHGV-0201822_14	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0201822_14	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0201822_14	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0201822_15	K06909	78.8	6.8e-23	xtmB; phage terminase large subunit	N/A
UniRef90	UHGV-0201822_15	UniRef90_A0A1M7MXD7	731.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0201822_15	394503.Ccel_3050	633.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0201822_15	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0201822_15	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0201822_16	phrog_533	290.6	0	portal protein	head and packaging
UniRef90	UHGV-0201822_16	UniRef90_UPI001F14233C	632.0	0	capsid protein	N/A
eggNOG-mapper	UHGV-0201822_16	1282664.H354_06626	534.0	0	N/A	N/A
structural_annotation	UHGV-0201822_16	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0201822_17	phrog_581	226.3	0	minor head protein	head and packaging
UniRef90	UHGV-0201822_17	UniRef90_A0A414W2X3	550.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0201822_17	33035.JPJF01000093_gene2255	433.0	0	N/A	N/A
Pfam	UHGV-0201822_17	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0201822_17	PF18451	N/A	N/A	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C
COG	UHGV-0201822_17	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0201822_17	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0201822_18	phrog_2303	134.1	1e-39	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0201822_18	483218.BACPEC_01156	173.0	0	N/A	N/A
PHROG	UHGV-0201822_19	phrog_422	261.3	0	major head protein	head and packaging
UniRef90	UHGV-0201822_19	UniRef90_A0A414W378	491.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0201822_19	663278.Ethha_1589	385.0	0	N/A	N/A
structural_annotation	UHGV-0201822_19	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0201822_20	phrog_541	69.3	5.1e-20	head-tail adaptor	connector
eggNOG-mapper	UHGV-0201822_20	483218.BACPEC_01153	150.0	2.8026e-45	N/A	N/A
PHROG	UHGV-0201822_21	phrog_8710	133.2	7.2e-40	N/A	unknown function
eggNOG-mapper	UHGV-0201822_21	742740.HMPREF9474_03508	139.0	2.34998e-41	N/A	N/A
structural_annotation	UHGV-0201822_21	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0201822_22	phrog_556	60.1	3.1e-17	minor head protein	head and packaging
eggNOG-mapper	UHGV-0201822_22	585501.HMPREF6123_0831	144.0	5.15678e-43	N/A	N/A
PHROG	UHGV-0201822_23	phrog_2595	94.7	7e-28	head-tail connector protein	connector
UniRef90	UHGV-0201822_23	UniRef90_UPI00164BAA81	130.0	2.69e-36	minor capsid protein	N/A
eggNOG-mapper	UHGV-0201822_23	483218.BACPEC_01150	110.0	1.62e-29	N/A	N/A
Pfam	UHGV-0201822_23	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0201822_23	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0201822_24	phrog_820	115.4	3e-34	major tail protein	tail
UniRef90	UHGV-0201822_24	UniRef90_T3DDR1	200.0	0	Phage major tail 2 family protein	N/A
eggNOG-mapper	UHGV-0201822_24	1151292.QEW_2426	200.0	0	N/A	N/A
structural_annotation	UHGV-0201822_24	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0201822_25	phrog_8300	81.2	7.7e-24	N/A	unknown function
eggNOG-mapper	UHGV-0201822_25	1151292.QEW_2425	92.4	7.67e-23	N/A	N/A
structural_annotation	UHGV-0201822_25	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-0201822_27	phrog_1535	283.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0201822_27	UniRef90_A0A1I1XW41	464.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0201822_27	717606.PaecuDRAFT_3132	444.0	0	Phage-related minor tail protein	N/A
COG	UHGV-0201822_27	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0201822_27	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0201822_28	phrog_1194	74.3	1.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-0201822_28	742740.HMPREF9474_03515	170.0	0	N/A	N/A
structural_annotation	UHGV-0201822_28	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0201822_29	phrog_13879	171.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0201822_29	1235800.C819_00474	184.0	0	N/A	N/A
structural_annotation	UHGV-0201822_29	PF19318,PF16466,MF_00813,NF010371,COG4266	N/A	N/A	N/A	N/A