UHGV-0203207 (vOTU-047629)

Viral Genome: UHGV-0203207

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0203207
vOTU ID	vOTU-047629
Representative Genome?	Yes
Source	CHVD
Original Genome ID	SAMN11252277_a1_ct27789@circular@Podoviridae__sp._ctHC7789
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	6
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9784
Viral Hallmark Genes (geNomad)	3
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Uncertain - viral or bacterial
ViralVerify Score	3.16
Jumbo Phage?	No

Genome Content
Length (bps)	62,451
GC Content	43.83%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	62
CDS Density	94%
Average CDS Length (bps)	944.23
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0203207_2	PF01694,MF_01594,NF008155,COG0705	N/A	N/A	N/A	N/A
PHROG	UHGV-0203207_3	phrog_2	87.6	1.7e-25	terminase large subunit	head and packaging
UniRef90	UHGV-0203207_3	UniRef90_A0A413BQF7	1310.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0203207_3	1121098.HMPREF1534_01124	499.0	0	Mu-like prophage FluMu protein gp28	N/A
COG	UHGV-0203207_3	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-0203207_3	PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0203207_5	phrog_156	138.3	3.39997e-41	portal protein	head and packaging
eggNOG-mapper	UHGV-0203207_5	742817.HMPREF9449_01798	202.0	0	N/A	N/A
structural_annotation	UHGV-0203207_5	PF16510,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0203207_6	TIGR01689,COG0241	N/A	N/A	N/A	N/A
KOfam	UHGV-0203207_7	K00558	113.9	1.3e-33	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0203207_7	phrog_10089	152.9	1.4013e-45	DarB-like antirestriction	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0203207_7	UniRef90_UPI001F3AF089	8445.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0203207_7	563031.HMPREF0666_01152	201.0	0	Helicase C-terminal domain protein	N/A
PADLOC	UHGV-0203207_7	MTase_II_00164	89.8	6.1e-27	Type II methyltransferase	RM
Pfam	UHGV-0203207_7	PF18823	N/A	N/A	Inorganic Pyrophosphatase	InPase
Pfam	UHGV-0203207_7	PF18810	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease2	PBECR2
Pfam	UHGV-0203207_7	PF18838	N/A	N/A	Large polyvalent protein associated domain 23	LPD23
Pfam	UHGV-0203207_7	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0203207_7	COG0249	N/A	N/A	DNA mismatch repair ATPase MutS	N/A
eggNOG-mapper	UHGV-0203207_11	1336803.PHEL49_0023	48.9	0.00000588	N/A	N/A
KOfam	UHGV-0203207_12	K04763	64.1	2.4e-18	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0203207_12	phrog_1	88.2	1.1e-25	integrase	integration and excision
UniRef90	UHGV-0203207_12	UniRef90_A0A3R5YAT6	933.0	0	Transposase	N/A
eggNOG-mapper	UHGV-0203207_12	679191.HMPREF9018_0670	414.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0203207_12	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
COG	UHGV-0203207_12	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0203207_12	PF13102,PF17293,NF007246,COG4973	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0203207_13	1270196.JCKI01000001_gene3597	53.9	0.0000000516	N/A	N/A
UniRef90	UHGV-0203207_16	UniRef90_UPI001C47721E	190.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0203207_16	1121097.JCM15093_2727	52.4	0.000000377	Helix-turn-helix	N/A
Pfam	UHGV-0203207_16	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0203207_16	PF13443,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0203207_18	phrog_874	97.1	8.7e-29	N/A	unknown function
eggNOG-mapper	UHGV-0203207_18	1122973.KB904232_gene340	143.0	3.46999e-40	N/A	N/A
structural_annotation	UHGV-0203207_18	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0203207_19	999419.HMPREF1077_02927	65.1	0.000000000000211	N/A	N/A
eggNOG-mapper	UHGV-0203207_20	999419.HMPREF1077_02928	65.1	0.00000000000226	N/A	N/A
structural_annotation	UHGV-0203207_20	NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-0203207_23	phrog_872	71.2	7.4e-39	N/A	unknown function
UniRef90	UHGV-0203207_23	UniRef90_A0A6A7VVD7	260.0	0	N/A	N/A
eggNOG-mapper	UHGV-0203207_23	1122971.BAME01000039_gene3564	156.0	1.4013e-45	N/A	N/A
Pfam	UHGV-0203207_23	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-0203207_23	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-0203207_23	PF11195	N/A	N/A	N/A	N/A
KOfam	UHGV-0203207_25	K00558	160.0	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0203207_25	phrog_363	213.0	0	DNA methyltransferase	other
UniRef90	UHGV-0203207_25	UniRef90_UPI001F195CB5	615.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0203207_25	1227276.HMPREF9148_00139	400.0	0	DNA methylase	N/A
PADLOC	UHGV-0203207_25	MTase_II_00058	132.9	3.3e-39	Type II methyltransferase	RM
Pfam	UHGV-0203207_25	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0203207_25	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0203207_25	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0203207_25	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0203207_26	phrog_345	48.0	0.00000000000024	replication initiation O-like	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0203207_26	435591.BDI_0859	60.5	0.000000328	DnaD domain protein	N/A
COG	UHGV-0203207_26	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0203207_26	PF07106,MF_01819,TIGR01714,COG1510	N/A	N/A	N/A	N/A
PHROG	UHGV-0203207_27	phrog_824	97.7	6.2e-29	N/A	unknown function
UniRef90	UHGV-0203207_27	UniRef90_A0A3D6E9A8	88.6	3.61e-19	Nuclease	N/A
eggNOG-mapper	UHGV-0203207_27	1122985.HMPREF1991_01533	81.6	1.75e-17	VRR-NUC domain	N/A
PHROG	UHGV-0203207_29	phrog_20807	50.8	0.000000000000026	N/A	unknown function
eggNOG-mapper	UHGV-0203207_29	619693.HMPREF6745_2510	71.6	0.00000000000208	N/A	N/A
structural_annotation	UHGV-0203207_29	PF00684,TIGR00663,COG0592	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0203207_32	PF19716	N/A	N/A	N/A	N/A
PHROG	UHGV-0203207_34	phrog_32732	62.4	6.1e-18	N/A	unknown function
UniRef90	UHGV-0203207_34	UniRef90_UPI0018EE5327	113.0	2.83e-28	N/A	N/A
eggNOG-mapper	UHGV-0203207_34	762982.HMPREF9442_01182	83.6	1.27e-17	N/A	N/A
dbAPIS	UHGV-0203207_34	APIS052	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0203207_36	PF13069	N/A	N/A	N/A	N/A
PHROG	UHGV-0203207_37	phrog_19572	174.6	0	N/A	unknown function
UniRef90	UHGV-0203207_37	UniRef90_UPI001C4689B9	305.0	0	N/A	N/A
eggNOG-mapper	UHGV-0203207_37	537011.PREVCOP_04244	219.0	0	N/A	N/A
Pfam	UHGV-0203207_37	PF14902	N/A	N/A	N/A	DUF4494
structural_annotation	UHGV-0203207_37	PF14902	N/A	N/A	N/A	N/A
PHROG	UHGV-0203207_41	phrog_32516	270.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0203207_41	1121098.HMPREF1534_01101	345.0	0	N/A	N/A
structural_annotation	UHGV-0203207_41	PF11134,COG3292	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0203207_44	679190.HMPREF0650_1967	77.4	0.00000000000000148	N/A	N/A
PHROG	UHGV-0203207_45	phrog_15037	41.7	0.000000000014	N/A	unknown function
UniRef90	UHGV-0203207_45	UniRef90_UPI001C46F9DA	317.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-0203207_45	563008.HMPREF0665_02457	76.3	0.00000000000000325	N/A	N/A
structural_annotation	UHGV-0203207_45	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0203207_47	PF21744	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0203207_48	PF10628	N/A	N/A	N/A	N/A
PHROG	UHGV-0203207_49	phrog_16490	61.1	2.5e-17	N/A	unknown function
UniRef90	UHGV-0203207_49	UniRef90_A0A8F1B6S5	241.0	0	Outer capsid protein/viral fiber	N/A
eggNOG-mapper	UHGV-0203207_49	762982.HMPREF9442_01201	99.4	2.86e-21	N/A	N/A
UniRef90	UHGV-0203207_50	UniRef90_A0A413BQD9	186.0	0	DNA-binding protein	N/A
structural_annotation	UHGV-0203207_50	PF05930,NF033499,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0203207_52	phrog_15610	140.9	2.40042e-42	protease	other
eggNOG-mapper	UHGV-0203207_52	688246.Premu_0381	115.0	7.08e-32	N/A	N/A
KOfam	UHGV-0203207_53	K01447	40.4	0.000000000046	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0203207_53	phrog_822	138.6	2.89999e-41	amidase	lysis
UniRef90	UHGV-0203207_53	UniRef90_UPI001C4521A5	270.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0203207_53	563031.HMPREF0666_01136	168.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0203207_53	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0203207_53	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-0203207_53	PF01510,MF_04111,NF008758,COG3023	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0203207_54	742727.HMPREF9447_04856	59.3	0.000000000193	N/A	N/A
KOfam	UHGV-0203207_55	K07481	43.4	0.0000000000055	K07481; transposase, IS5 family	N/A
PHROG	UHGV-0203207_55	phrog_10603	111.3	7.8e-33	N/A	unknown function
UniRef90	UHGV-0203207_55	UniRef90_R6BAV8	605.0	0	Transposase	N/A
eggNOG-mapper	UHGV-0203207_55	997353.HMPREF9144_2828	493.0	0	Transposase IS4 family	N/A
Pfam	UHGV-0203207_55	PF01609	N/A	N/A	Transposase DDE domain	DDE_Tnp_1
NCBIFam	UHGV-0203207_55	NF033520.1	N/A	N/A	IS982 family transposase	N/A
COG	UHGV-0203207_55	COG3039	N/A	N/A	Transposase and inactivated derivatives, IS5 family	N/A
structural_annotation	UHGV-0203207_56	PF03370	N/A	N/A	N/A	N/A
PHROG	UHGV-0203207_59	phrog_22135	46.5	0.00000000000015	N/A	unknown function
eggNOG-mapper	UHGV-0203207_59	679191.HMPREF9018_0450	59.3	0.000000063	N/A	N/A
structural_annotation	UHGV-0203207_59	PF17212	N/A	N/A	N/A	N/A
PHROG	UHGV-0203207_61	phrog_26635	170.4	0	N/A	unknown function
UniRef90	UHGV-0203207_61	UniRef90_UPI001C38231A	236.0	0	N/A	N/A
eggNOG-mapper	UHGV-0203207_61	1227276.HMPREF9148_00159	208.0	0	N/A	N/A
structural_annotation	UHGV-0203207_61	PF17236,MF_04133,TIGR01554,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0203207_62	phrog_22323	57.3	1.1e-16	N/A	unknown function
eggNOG-mapper	UHGV-0203207_62	1227276.HMPREF9148_00160	62.4	0.0000000147	N/A	N/A