UHGV-0206640 (vOTU-148680)

Viral Genome: UHGV-0206640

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0206640
vOTU ID	vOTU-148680
Representative Genome?	Yes
Source	CHVD
Original Genome ID	SAMN11893692_a1_ct60404_vs1@linear@Unclassified_virus__sp._ctetI1
Associated Biosample	SAMN11893692
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	75.17 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	11
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9726
Viral Hallmark Genes (geNomad)	8
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	24.64
Jumbo Phage?	No

Genome Content
Length (bps)	26,430
GC Content	43.81%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	45
CDS Density	91%
Average CDS Length (bps)	536.93
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 75.17)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0206640_2	phrog_10	76.2	5.5e-22	major head protein	head and packaging
UniRef90	UHGV-0206640_2	UniRef90_A0A1C5W5F9	258.0	0	Phage major capsid protein, HK97 family	N/A
eggNOG-mapper	UHGV-0206640_2	742740.HMPREF9474_04304	303.0	0	Phage capsid family	N/A
Pfam	UHGV-0206640_2	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0206640_2	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0206640_2	PF05065,PF09032,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0206640_3	UniRef90_UPI001E432EFF	105.0	1.01e-27	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0206640_3	768704.Desmer_4461	63.9	0.00000000000371	N/A	N/A
structural_annotation	UHGV-0206640_3	PF05135,TIGR01560	N/A	N/A	N/A	N/A
UniRef90	UHGV-0206640_4	UniRef90_A0A6B9SS91	140.0	8.36996e-41	Head-tail connector	N/A
eggNOG-mapper	UHGV-0206640_4	1536774.H70357_10645	77.8	5.5e-17	N/A	N/A
Pfam	UHGV-0206640_4	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-0206640_4	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0206640_5	phrog_5	44.1	0.0000000000043	tail completion or Neck1 protein	connector
NCBIFam	UHGV-0206640_5	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0206640_5	TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0206640_6	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0206640_7	phrog_88	77.4	1.9e-22	major tail protein	tail
UniRef90	UHGV-0206640_7	UniRef90_A0A6S6XCZ4	84.7	4.53e-16	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0206640_7	1246626.BleG1_2876	66.6	0.0000000000665	phage major tail protein, phi13 family	N/A
structural_annotation	UHGV-0206640_7	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0206640_8	phrog_1863	44.9	0.0000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0206640_8	913865.DOT_5612	60.8	0.0000000000891	N/A	N/A
PHROG	UHGV-0206640_10	phrog_23464	246.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0206640_10	665950.HMPREF1025_02660	194.0	0	phage tail tape measure protein	N/A
COG	UHGV-0206640_10	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0206640_10	PF05537,MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0206640_11	phrog_33	82.7	8.3e-24	distal tail protein Dit	tail
UniRef90	UHGV-0206640_11	UniRef90_A0A843HU58	255.0	0	Phage tail family protein	N/A
eggNOG-mapper	UHGV-0206640_11	706433.HMPREF9430_01256	86.7	5.65e-17	Phage tail protein	N/A
structural_annotation	UHGV-0206640_11	PF20753,PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0206640_12	phrog_538	219.5	0	minor tail protein	tail
UniRef90	UHGV-0206640_12	UniRef90_A0A843HVV8	285.0	0	Siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0206640_12	768704.Desmer_4453	170.0	0	Siphovirus ReqiPepy6 Gp37-like protein	N/A
Pfam	UHGV-0206640_12	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0206640_12	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0206640_13	phrog_1220	169.1	0	head protein	head and packaging
eggNOG-mapper	UHGV-0206640_13	431943.CKL_4054	104.0	2.03e-20	COG NOG18825 non supervised orthologous group	N/A
structural_annotation	UHGV-0206640_13	PF03906,PF20747	N/A	N/A	N/A	N/A
KOfam	UHGV-0206640_16	K01447	57.1	4.2e-16	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0206640_16	phrog_7698	185.2	0	endolysin	lysis
UniRef90	UHGV-0206640_16	UniRef90_A0A3D0LYP2	276.0	0	Cell division protein	N/A
eggNOG-mapper	UHGV-0206640_16	293826.Amet_2548	250.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0206640_16	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0206640_16	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-0206640_16	PF01510,PF18342,MF_04111,NF008758,COG3023,COG4991	N/A	N/A	N/A	N/A
KOfam	UHGV-0206640_17	K14059	195.3	0	int; integrase	N/A
PHROG	UHGV-0206640_17	phrog_1	186.3	0	integrase	integration and excision
UniRef90	UHGV-0206640_17	UniRef90_A0A1H8A220	236.0	0	Site-specific recombinase XerD	N/A
eggNOG-mapper	UHGV-0206640_17	1507.HMPREF0262_00307	177.0	0	Phage integrase family	N/A
Pfam	UHGV-0206640_17	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0206640_17	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0206640_17	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0206640_18	phrog_1914	131.6	5.5e-39	N/A	unknown function
UniRef90	UHGV-0206640_18	UniRef90_A0A2N0ULV1	176.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-0206640_18	1160721.RBI_I01604	125.0	5.66e-33	N/A	N/A
Pfam	UHGV-0206640_18	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0206640_18	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
PHROG	UHGV-0206640_19	phrog_8	46.1	0.000000000001	transcriptional regulator	transcription regulation
UniRef90	UHGV-0206640_19	UniRef90_A0A354MUR6	88.6	1.73e-20	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0206640_19	1378168.N510_01712	67.0	0.00000000000959	N/A	N/A
structural_annotation	UHGV-0206640_19	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0206640_21	K23779	63.0	7.7e-18	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0206640_21	phrog_5823	49.6	0.000000000000063	transcriptional regulator	transcription regulation
UniRef90	UHGV-0206640_21	UniRef90_A0A4S2A9B1	98.2	1.38e-25	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0206640_21	1226325.HMPREF1548_03113	67.8	0.0000000000000601	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0206640_21	retron_type_VI_hth_cluster2_1	54.6	0.0000000000000031	N/A	Retron
Pfam	UHGV-0206640_21	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0206640_21	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0206640_22	phrog_10292	48.0	0.00000000000013	N/A	unknown function
UniRef90	UHGV-0206640_22	UniRef90_A0A847W5U8	91.3	2.37e-18	NINE protein	N/A
eggNOG-mapper	UHGV-0206640_22	445972.ANACOL_01855	77.0	0.00000000000000758	TM2 domain	N/A
Pfam	UHGV-0206640_22	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-0206640_22	COG2314	N/A	N/A	N/A	N/A
PHROG	UHGV-0206640_25	phrog_14105	372.5	0	N/A	unknown function
UniRef90	UHGV-0206640_25	UniRef90_U2BMS0	236.0	0	Pentapeptide repeat protein	N/A
eggNOG-mapper	UHGV-0206640_25	742740.HMPREF9474_02379	159.0	1.4013e-45	dextransucrase activity	N/A
Pfam	UHGV-0206640_25	PF01469	N/A	N/A	Pentapeptide repeats (8 copies)	Pentapeptide_2
COG	UHGV-0206640_25	COG5263	N/A	N/A	Glucan-binding domain (YG repeat)	N/A
PHROG	UHGV-0206640_28	phrog_14970	294.1	0	N/A	unknown function
UniRef90	UHGV-0206640_28	UniRef90_A0A015RRM9	211.0	0	Rad52/22 double-strand break repair family protein	N/A
eggNOG-mapper	UHGV-0206640_28	1226322.HMPREF1545_04073	251.0	0	double-strand break repair protein	N/A
Pfam	UHGV-0206640_28	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-0206640_28	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0206640_28	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0206640_29	phrog_72	59.0	6.1e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0206640_29	UniRef90_A0A8D9PDS2	165.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0206640_29	1399942.U3PCT8_9CAUD	125.0	7.06e-34	N/A	N/A
structural_annotation	UHGV-0206640_29	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0206640_30	phrog_7566	93.1	1.9e-27	N/A	unknown function
UniRef90	UHGV-0206640_30	UniRef90_A0A3B9CDC4	55.5	0.0000000488	Phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-0206640_30	1507.HMPREF0262_00433	53.5	0.0000000368	N/A	N/A
KOfam	UHGV-0206640_32	K03111	112.3	7.4e-33	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0206640_32	phrog_44	115.4	5.5e-34	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0206640_32	UniRef90_A0A7C6GL00	119.0	7.31e-32	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0206640_32	742738.HMPREF9460_03732	93.2	7.05e-22	Single-strand binding protein family	N/A
Pfam	UHGV-0206640_32	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0206640_32	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0206640_32	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0206640_32	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0206640_32	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0206640_33	phrog_20437	182.9	0	DNA replication initiation	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0206640_33	UniRef90_R6M2T8	267.0	0	N/A	N/A
eggNOG-mapper	UHGV-0206640_33	755731.Clo1100_1141	173.0	0	N/A	N/A
Pfam	UHGV-0206640_33	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0206640_33	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0206640_33	PF14297	N/A	N/A	N/A	N/A
KOfam	UHGV-0206640_34	K06223	212.9	0	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-0206640_34	phrog_56	172.0	0	DNA methyltransferase	other
UniRef90	UHGV-0206640_34	UniRef90_R6R5E6	433.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0206640_34	411468.CLOSCI_00302	254.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-0206640_34	MTase_II_00030	261.7	0	Type II methyltransferase	RM
Pfam	UHGV-0206640_34	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-0206640_34	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-0206640_34	PF02086,MF_01872,NF008152,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-0206640_35	phrog_824	147.5	4.06377e-44	N/A	unknown function
UniRef90	UHGV-0206640_35	UniRef90_A0A3D3D6C6	157.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0206640_35	397288.C806_00096	137.0	3.05e-40	VRR_NUC	N/A
Pfam	UHGV-0206640_35	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0206640_35	PF08774	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0206640_36	760568.Desku_0919	98.2	9.28e-23	N/A	N/A
structural_annotation	UHGV-0206640_36	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
UniRef90	UHGV-0206640_38	UniRef90_A0A7V6XJY1	80.9	2.06e-18	Nicotinamide mononucleotide transporter	N/A
Pfam	UHGV-0206640_38	PF04973	N/A	N/A	Nicotinamide mononucleotide transporter	NMN_transporter
PHROG	UHGV-0206640_42	phrog_309	104.7	7.2e-31	terminase small subunit	head and packaging
UniRef90	UHGV-0206640_42	UniRef90_A0A6B9SX71	132.0	2.07e-36	Transposase/terminase small subunit	N/A
eggNOG-mapper	UHGV-0206640_42	500633.CLOHIR_01443	92.0	1.55e-21	HNH endonuclease	N/A
COG	UHGV-0206640_42	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0206640_42	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-0206640_43	phrog_419	68.1	3.1e-21	N/A	unknown function
UniRef90	UHGV-0206640_43	UniRef90_UPI001E40EA70	97.1	2.99e-25	PGDYG domain-containing protein	N/A
eggNOG-mapper	UHGV-0206640_43	864563.HMPREF9166_1012	84.7	3.63e-21	N/A	N/A