UHGV-0206989 (vOTU-147505)

Viral Genome: UHGV-0206989

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0206989
vOTU ID	vOTU-147505
Representative Genome?	Yes
Source	CHVD
Original Genome ID	SAMN09781779_a1_ct45993_vs1@Myoviridae__sp._ctJZm1
Associated Biosample	SAMN09781779
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	63.56 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	15
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9823
Viral Hallmark Genes (geNomad)	10
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	36.65
Jumbo Phage?	No

Genome Content
Length (bps)	20,450
GC Content	51.78%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	27
CDS Density	94%
Average CDS Length (bps)	713.00
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 63.56)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0206989_1	phrog_144	92.8	3.4e-27	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0206989_1	UniRef90_A0A844FGQ3	111.0	2.4e-28	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0206989_1	411459.RUMOBE_01739	111.0	1.28e-29	N/A	N/A
PHROG	UHGV-0206989_2	phrog_83	63.3	4.5e-18	terminase small subunit	head and packaging
UniRef90	UHGV-0206989_2	UniRef90_A0A316RD76	330.0	0	Phage terminase small subunit P27 family	N/A
eggNOG-mapper	UHGV-0206989_2	742741.HMPREF9475_00421	125.0	2.92e-34	Phage terminase, small subunit	N/A
Pfam	UHGV-0206989_2	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0206989_2	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0206989_2	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0206989_3	phrog_9	361.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0206989_3	UniRef90_A0A316R7M0	1159.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0206989_3	411459.RUMOBE_01737	709.0	0	N/A	N/A
Pfam	UHGV-0206989_3	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0206989_3	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0206989_3	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0206989_3	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0206989_4	phrog_12	299.4	0	portal protein	head and packaging
UniRef90	UHGV-0206989_4	UniRef90_A0A316R7D3	841.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0206989_4	411459.RUMOBE_01735	444.0	0	N/A	N/A
Pfam	UHGV-0206989_4	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0206989_4	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0206989_4	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0206989_4	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0206989_5	K01358	103.1	4e-30	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0206989_5	phrog_94	176.0	0	head maturation protease	head and packaging
UniRef90	UHGV-0206989_5	UniRef90_A0A316R8I3	492.0	0	Clp protease	N/A
eggNOG-mapper	UHGV-0206989_5	742741.HMPREF9475_00424	203.0	0	Clp protease	N/A
Pfam	UHGV-0206989_5	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0206989_5	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0206989_5	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0206989_6	phrog_10	188.2	0	major head protein	head and packaging
UniRef90	UHGV-0206989_6	UniRef90_A0A316RM35	695.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0206989_6	411459.RUMOBE_01733	311.0	0	phage phi-C31 gp36 major capsid-like protein	N/A
Pfam	UHGV-0206989_6	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0206989_6	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0206989_6	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0206989_6	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0206989_7	UniRef90_A0A316R9F5	177.0	0	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0206989_7	411459.RUMOBE_01732	73.6	6.84e-16	N/A	N/A
Pfam	UHGV-0206989_7	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0206989_7	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0206989_7	PF05135,TIGR01560	N/A	N/A	N/A	N/A
UniRef90	UHGV-0206989_8	UniRef90_A0A316R8D9	226.0	0	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0206989_8	195103.CPF_1582	69.3	0.0000000000000818	Phage head-tail adaptor	N/A
Pfam	UHGV-0206989_8	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0206989_8	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0206989_8	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0206989_9	UniRef90_A0A174MCG9	90.1	2.71e-20	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0206989_9	411459.RUMOBE_01730	90.1	4.55e-21	Phage protein, HK97 gp10 family	N/A
NCBIFam	UHGV-0206989_9	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0206989_9	PF04883,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0206989_10	phrog_78	51.4	0.00000000000002	tail terminator	connector
eggNOG-mapper	UHGV-0206989_10	411468.CLOSCI_01495	95.1	1.44e-23	N/A	N/A
structural_annotation	UHGV-0206989_10	PF05657,NF040576,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0206989_11	phrog_88	136.6	1.2e-40	major tail protein	tail
UniRef90	UHGV-0206989_11	UniRef90_A0A316RAJ2	394.0	0	Major tail protein	N/A
eggNOG-mapper	UHGV-0206989_11	411459.RUMOBE_01728	228.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0206989_11	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0206989_11	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0206989_11	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0206989_12	phrog_13494	59.6	4.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0206989_12	742741.HMPREF9475_00431	53.5	0.000000127	N/A	N/A
PHROG	UHGV-0206989_13	phrog_25901	74.2	2.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-0206989_13	411468.CLOSCI_01498	65.5	0.000000000025	N/A	N/A
KOfam	UHGV-0206989_14	K10421	40.0	0.000000000017	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-0206989_14	phrog_1533	520.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0206989_14	UniRef90_A0A316R7C3	1026.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0206989_14	35241.Q9AYV8_BPTU2	365.0	0	peptidoglycan catabolic process	N/A
Pfam	UHGV-0206989_14	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0206989_14	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
PHROG	UHGV-0206989_15	phrog_33	76.4	5.9e-22	distal tail protein Dit	tail
UniRef90	UHGV-0206989_15	UniRef90_A0A3E3AF06	105.0	3.42e-24	Phage tail protein	N/A
eggNOG-mapper	UHGV-0206989_15	1232452.BAIB02000007_gene1615	143.0	1.78e-39	phage tail	N/A
Pfam	UHGV-0206989_15	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-0206989_15	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0206989_15	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0206989_15	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0206989_16	phrog_13289	173.7	0	tail protein	tail
UniRef90	UHGV-0206989_16	UniRef90_A0A316RM27	1016.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0206989_16	1280689.AUJC01000011_gene1532	116.0	7.53e-25	Prophage endopeptidase tail	N/A
Pfam	UHGV-0206989_16	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0206989_16	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0206989_16	COG4926	N/A	N/A	Phage-related protein	N/A
UniRef90	UHGV-0206989_17	UniRef90_A0A316R9D9	1113.0	0	BppU_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0206989_17	641107.CDLVIII_4353	59.3	0.000000271	N/A	N/A
Pfam	UHGV-0206989_17	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
structural_annotation	UHGV-0206989_17	PF00386,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-0206989_18	UniRef90_R6J123	120.0	1.56e-34	ATP synthase B chain	N/A
PHROG	UHGV-0206989_19	phrog_4105	77.4	1.3e-22	N/A	unknown function
eggNOG-mapper	UHGV-0206989_19	610130.Closa_0762	69.3	0.000000000000122	N/A	N/A
PHROG	UHGV-0206989_20	phrog_263	92.7	1.9e-27	holin	lysis
UniRef90	UHGV-0206989_20	UniRef90_R6JQI4	152.0	0	Holin SPP1 family	N/A
eggNOG-mapper	UHGV-0206989_20	1297617.JPJD01000099_gene2175	76.3	3.5e-17	SPP1 phage holin	N/A
Pfam	UHGV-0206989_20	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-0206989_20	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0206989_20	PF04688	N/A	N/A	N/A	N/A
UniRef90	UHGV-0206989_21	UniRef90_R6J3S0	587.0	0	Peptidase_C39_2 domain-containing protein	N/A
Pfam	UHGV-0206989_21	PF13529	N/A	N/A	Peptidase_C39 like family	Peptidase_C39_2
structural_annotation	UHGV-0206989_21	PF11814,NF033920,COG4990	N/A	N/A	N/A	N/A
UniRef90	UHGV-0206989_23	UniRef90_A0A315YPS7	71.2	0.00000000000093	Helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0206989_23	1280668.ATVT01000007_gene1190	50.1	0.00000295	sequence-specific DNA binding	N/A
COG	UHGV-0206989_23	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0206989_24	PF19923,NF009981,COG0355	N/A	N/A	N/A	N/A
UniRef90	UHGV-0206989_27	UniRef90_A0A1Q6J4K7	80.9	1.19e-18	N/A	N/A
eggNOG-mapper	UHGV-0206989_27	411483.FAEPRAA2165_01527	80.1	4.01e-19	N/A	N/A
Pfam	UHGV-0206989_27	PF14056	N/A	N/A	N/A	DUF4250