UHGV-0209443 (vOTU-023464)

Viral Genome: UHGV-0209443

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0209443
vOTU ID	vOTU-023464
Representative Genome?	Yes
Source	CHVD
Original Genome ID	SAMN10408149_a1_ct16254_vs1@linear@Myoviridae__sp._ctM3z1
Associated Biosample	SAMN10408149
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	67.35 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	22
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.963
Viral Hallmark Genes (geNomad)	20
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	43.69
Jumbo Phage?	No

Genome Content
Length (bps)	25,058
GC Content	58.95%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	38
CDS Density	94%
Average CDS Length (bps)	620.45
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 67.35)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0209443_1	phrog_1224	238.6	0	endolysin	head and packaging
UniRef90	UHGV-0209443_1	UniRef90_UPI001474CB0F	342.0	0	N-acetylmuramidase family protein	N/A
eggNOG-mapper	UHGV-0209443_1	1282356.H045_14200	337.0	0	N/A	N/A
Pfam	UHGV-0209443_1	PF11860	N/A	N/A	N-acetylmuramidase	Muramidase
COG	UHGV-0209443_1	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0209443_1	PF11860,NF011856	N/A	N/A	N/A	N/A
PHROG	UHGV-0209443_2	phrog_10352	90.4	9.6e-27	N/A	unknown function
eggNOG-mapper	UHGV-0209443_2	1282356.H045_14205	113.0	1.67e-32	N/A	N/A
PHROG	UHGV-0209443_3	phrog_89	121.0	6.5e-36	Rz-like spanin	lysis
UniRef90	UHGV-0209443_3	UniRef90_A0A1U9Q299	229.0	0	Peptidase	N/A
eggNOG-mapper	UHGV-0209443_3	1282356.H045_14210	178.0	0	regulatory protein	N/A
NCBIFam	UHGV-0209443_3	TIGR03495.1	N/A	N/A	Rz-like lysis system protein LysB	N/A
structural_annotation	UHGV-0209443_3	TIGR03495	N/A	N/A	N/A	N/A
PHROG	UHGV-0209443_4	phrog_65	168.1	0	tail terminator	connector
UniRef90	UHGV-0209443_4	UniRef90_A0A1U9Q2R8	305.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0209443_4	1282356.H045_14220	292.0	0	P2 phage tail completion protein R (GpR)	N/A
Pfam	UHGV-0209443_4	PF06891	N/A	N/A	P2 phage tail completion protein R (GpR)	P2_Phage_GpR
structural_annotation	UHGV-0209443_4	PF06891	N/A	N/A	N/A	N/A
PHROG	UHGV-0209443_5	phrog_26	141.7	3.69943e-42	tail completion or Neck1 protein	connector
UniRef90	UHGV-0209443_5	UniRef90_A0A1G9YDC2	276.0	0	Phage virion morphogenesis (Putative tail completion) protein	N/A
eggNOG-mapper	UHGV-0209443_5	1282356.H045_14225	254.0	0	Phage virion morphogenesis family	N/A
Pfam	UHGV-0209443_5	PF05069	N/A	N/A	Phage virion morphogenesis family	Phage_tail_S
NCBIFam	UHGV-0209443_5	TIGR01635.1	N/A	N/A	phage virion morphogenesis protein	N/A
COG	UHGV-0209443_5	COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0209443_5	PF05069,TIGR01635,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0209443_6	phrog_9992	99.4	3.5e-29	baseplate assembly protein	tail
UniRef90	UHGV-0209443_6	UniRef90_A0A5E7A7M3	353.0	0	Phage_base_V domain-containing protein	N/A
eggNOG-mapper	UHGV-0209443_6	1395516.PMO01_08620	312.0	0	baseplate assembly protein	N/A
Pfam	UHGV-0209443_6	PF04717	N/A	N/A	Type VI secretion system/phage-baseplate injector OB domain	Phage_base_V
Pfam	UHGV-0209443_6	PF18946	N/A	N/A	GpV Apex motif	Apex
NCBIFam	UHGV-0209443_6	TIGR01644.1	N/A	N/A	phage baseplate assembly protein V	N/A
COG	UHGV-0209443_6	COG4540	N/A	N/A	Phage P2 baseplate assembly protein gpV	N/A
structural_annotation	UHGV-0209443_6	PF04717,MF_00216,TIGR01644,COG4540	N/A	N/A	N/A	N/A
KOfam	UHGV-0209443_7	K06903	113.4	2.4e-33	N/A	N/A
PHROG	UHGV-0209443_7	phrog_43	123.0	7.7e-37	baseplate wedge subunit	tail
UniRef90	UHGV-0209443_7	UniRef90_UPI001F176C73	217.0	0	GPW/gp25 family protein	N/A
eggNOG-mapper	UHGV-0209443_7	1282356.H045_14240	192.0	0	Gene 25-like lysozyme	N/A
Pfam	UHGV-0209443_7	PF04965	N/A	N/A	Baseplate wedge protein gp25	GPW_gp25
COG	UHGV-0209443_7	COG3628	N/A	N/A	Phage baseplate assembly protein W	N/A
structural_annotation	UHGV-0209443_7	PF04965,MF_02010,TIGR03357,COG3628	N/A	N/A	N/A	N/A
PHROG	UHGV-0209443_8	phrog_4226	269.3	0	baseplate protein	tail
UniRef90	UHGV-0209443_8	UniRef90_A0A5E7AG60	540.0	0	Baseplate_J domain-containing protein	N/A
eggNOG-mapper	UHGV-0209443_8	1282356.H045_14245	498.0	0	Baseplate assembly protein	N/A
Pfam	UHGV-0209443_8	PF04865	N/A	N/A	Baseplate J-like protein	Baseplate_J
COG	UHGV-0209443_8	COG3948	N/A	N/A	Phage-related baseplate assembly protein	N/A
structural_annotation	UHGV-0209443_8	PF04865,PF21379,MF_04102,COG3948	N/A	N/A	N/A	N/A
PHROG	UHGV-0209443_9	phrog_48	209.0	0	tail protein	tail
UniRef90	UHGV-0209443_9	UniRef90_UPI0015B97C6E	374.0	0	phage tail protein I	N/A
eggNOG-mapper	UHGV-0209443_9	1282356.H045_14250	367.0	0	Tail protein	N/A
Pfam	UHGV-0209443_9	PF09684	N/A	N/A	Phage tail protein (Tail_P2_I)	Tail_P2_I
NCBIFam	UHGV-0209443_9	TIGR01634.1	N/A	N/A	phage tail protein I	N/A
COG	UHGV-0209443_9	COG4385	N/A	N/A	Bacteriophage P2-related tail formation protein	N/A
structural_annotation	UHGV-0209443_9	PF09684,TIGR01634,COG4385	N/A	N/A	N/A	N/A
PHROG	UHGV-0209443_10	phrog_327	328.7	0	tail protein	tail
UniRef90	UHGV-0209443_10	UniRef90_UPI001E3AEFBC	402.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0209443_10	1005395.CSV86_03332	312.0	0	tail fiber protein	N/A
Pfam	UHGV-0209443_10	PF12571	N/A	N/A	Phage tail-collar fibre protein	DUF3751
COG	UHGV-0209443_10	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
structural_annotation	UHGV-0209443_10	PF12571,PF03406,COG5301	N/A	N/A	N/A	N/A
PHROG	UHGV-0209443_11	phrog_188	83.4	3.9e-24	tail fiber assembly protein	tail
UniRef90	UHGV-0209443_11	UniRef90_UPI000D047ACC	165.0	0	tail fiber assembly protein	N/A
eggNOG-mapper	UHGV-0209443_11	1117958.PE143B_0129840	89.4	5.94e-21	Caudovirales tail fibre assembly protein, lambda gpK	N/A
Pfam	UHGV-0209443_11	PF02413	N/A	N/A	Caudovirales tail fibre assembly protein, lambda gpK	Caudo_TAP
COG	UHGV-0209443_11	COG5525	N/A	N/A	Phage terminase, large subunit GpA	N/A
structural_annotation	UHGV-0209443_11	PF02413	N/A	N/A	N/A	N/A
KOfam	UHGV-0209443_12	K06907	275.9	0	N/A	N/A
PHROG	UHGV-0209443_12	phrog_23	394.7	0	tail sheath	tail
UniRef90	UHGV-0209443_12	UniRef90_A0A263NVE8	728.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0209443_12	1282356.H045_14265	734.0	0	Tail sheath protein	N/A
Pfam	UHGV-0209443_12	PF04984	N/A	N/A	Phage tail sheath protein subtilisin-like domain	Phage_sheath_1
Pfam	UHGV-0209443_12	PF17482	N/A	N/A	Phage tail sheath C-terminal domain	Phage_sheath_1C
COG	UHGV-0209443_12	COG3497	N/A	N/A	Phage tail sheath protein FI	N/A
structural_annotation	UHGV-0209443_12	PF10758,TIGR03355,COG3497	N/A	N/A	N/A	N/A
KOfam	UHGV-0209443_13	K06908	199.0	0	N/A	N/A
PHROG	UHGV-0209443_13	phrog_55	210.6	0	head closure	connector
UniRef90	UHGV-0209443_13	UniRef90_A0A7Y1QET4	326.0	0	Phage major tail tube protein	N/A
eggNOG-mapper	UHGV-0209443_13	1282356.H045_14270	322.0	0	tail tube protein	N/A
Pfam	UHGV-0209443_13	PF04985	N/A	N/A	Phage tail tube protein FII	Phage_tube
NCBIFam	UHGV-0209443_13	TIGR01611.1	N/A	N/A	phage major tail tube protein	N/A
COG	UHGV-0209443_13	COG3498	N/A	N/A	Phage tail tube protein FII	N/A
structural_annotation	UHGV-0209443_13	PF04985,TIGR01611,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0209443_14	phrog_103	136.5	4.90006e-41	tail protein	tail
UniRef90	UHGV-0209443_14	UniRef90_A0A5B0C2H6	198.0	0	Phage tail assembly protein	N/A
eggNOG-mapper	UHGV-0209443_14	1038922.PflQ2_3580	136.0	2.13e-40	Phage tail assembly chaperone proteins, E, or 41 or 14	N/A
Pfam	UHGV-0209443_14	PF10109	N/A	N/A	Phage tail assembly chaperone proteins, E, or 41 or 14	Phage_TAC_7
structural_annotation	UHGV-0209443_14	PF10109,COG4518	N/A	N/A	N/A	N/A
PHROG	UHGV-0209443_15	phrog_6416	69.5	2.8e-20	tail protein	tail
UniRef90	UHGV-0209443_15	UniRef90_A0A0C2EZH5	81.3	1.04e-19	N/A	N/A
eggNOG-mapper	UHGV-0209443_15	1038922.PflQ2_3581	79.3	1.01e-19	Phage P2 GpE	N/A
Pfam	UHGV-0209443_15	PF06528	N/A	N/A	Phage P2 GpE	Phage_P2_GpE
PHROG	UHGV-0209443_16	phrog_28	165.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0209443_16	UniRef90_A0A5B0C1A6	1667.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0209443_16	1149133.ppKF707_3083	1083.0	0	peptidase	N/A
COG	UHGV-0209443_16	COG4942	N/A	N/A	Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB	N/A
structural_annotation	UHGV-0209443_16	PF20155,COG5280	N/A	N/A	N/A	N/A
KOfam	UHGV-0209443_17	K06906	219.6	0	N/A	N/A
PHROG	UHGV-0209443_17	phrog_76	199.5	0	tail protein	tail
UniRef90	UHGV-0209443_17	UniRef90_A0A7Y1Q842	277.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0209443_17	1316927.ATKI01000043_gene2954	269.0	0	Phage P2 GpU	N/A
Pfam	UHGV-0209443_17	PF06995	N/A	N/A	Phage P2 GpU	Phage_P2_GpU
COG	UHGV-0209443_17	COG3499	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0209443_17	PF06995,TIGR01633,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-0209443_18	K06905	411.3	0	N/A	N/A
PHROG	UHGV-0209443_18	phrog_52	407.6	0	tail protein	tail
UniRef90	UHGV-0209443_18	UniRef90_A0A172Z6H8	788.0	0	Late control protein	N/A
eggNOG-mapper	UHGV-0209443_18	1124983.PFLCHA0_c20450	747.0	0	Phage late control gene D protein (GPD)	N/A
Pfam	UHGV-0209443_18	PF05954	N/A	N/A	Phage tail baseplate hub (GPD)	Phage_GPD
COG	UHGV-0209443_18	COG3500	N/A	N/A	N/A	N/A
UniRef90	UHGV-0209443_21	UniRef90_A0A5B0C2Q5	217.0	0	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0209443_21	69328.PVLB_24075	105.0	3.99e-28	sequence-specific DNA binding	N/A
Pfam	UHGV-0209443_21	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0209443_21	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0209443_21	PF01381,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0209443_22	phrog_925	91.4	3.8e-27	HTH DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0209443_22	UniRef90_A0A1G9YDZ0	137.0	2.76995e-41	Phage-associated protein, BcepMu gp16 family	N/A
eggNOG-mapper	UHGV-0209443_22	1221522.B723_06180	107.0	5.29e-30	N/A	N/A
NCBIFam	UHGV-0209443_22	TIGR04111.1	N/A	N/A	phage-associated protein, BcepMu gp16 family	N/A
PHROG	UHGV-0209443_23	phrog_25436	124.8	1.6e-37	N/A	unknown function
UniRef90	UHGV-0209443_23	UniRef90_A0A3G7JXK9	256.0	0	N/A	N/A
eggNOG-mapper	UHGV-0209443_23	1124983.PFLCHA0_c20410	259.0	0	N/A	N/A
NCBIFam	UHGV-0209443_23	NF041471.1	N/A	N/A	YmfL family putative regulatory protein	N/A
structural_annotation	UHGV-0209443_23	PF06892,NF041471	N/A	N/A	N/A	N/A
PHROG	UHGV-0209443_24	phrog_22692	95.8	1.7e-28	N/A	unknown function
PHROG	UHGV-0209443_25	phrog_603	79.0	5.7e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0209443_25	UniRef90_A0A0C5E262	192.0	0	Ogr_Delta domain-containing protein	N/A
eggNOG-mapper	UHGV-0209443_25	1211112.ALJC01000075_gene2970	182.0	0	transcriptional activator, Ogr delta	N/A
Pfam	UHGV-0209443_25	PF04606	N/A	N/A	Ogr/Delta-like zinc finger	Ogr_Delta
PHROG	UHGV-0209443_26	phrog_3461	116.2	1.8e-34	N/A	unknown function
eggNOG-mapper	UHGV-0209443_26	1282356.H045_14325	196.0	0	N/A	N/A
PHROG	UHGV-0209443_27	phrog_3967	91.4	4.5e-27	N/A	unknown function
UniRef90	UHGV-0209443_27	UniRef90_A0A0C2IH72	127.0	4.5e-37	Putative adenylate kinase	N/A
eggNOG-mapper	UHGV-0209443_27	1124983.PFLCHA0_c20380	125.0	6.21e-37	N/A	N/A
PHROG	UHGV-0209443_28	phrog_1139	899.1	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0209443_28	UniRef90_A0A1J0EG87	1717.0	0	Bifunctional DNA primase/helicase	N/A
eggNOG-mapper	UHGV-0209443_28	287.DR97_1375	1367.0	0	Toprim-like	N/A
Pfam	UHGV-0209443_28	PF13155	N/A	N/A	Toprim-like	Toprim_2
COG	UHGV-0209443_28	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0209443_28	PF06048,PF13155,MF_01625,MF_00017,NF005477,COG5519,COG0358	N/A	N/A	N/A	N/A
PHROG	UHGV-0209443_29	phrog_1139	98.2	4.9e-29	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0209443_29	UniRef90_UPI000BB5B717	197.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0209443_29	287.DR97_1375	124.0	2.6e-29	Toprim-like	N/A
COG	UHGV-0209443_29	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
PHROG	UHGV-0209443_30	phrog_6694	152.5	1.4013e-45	N/A	unknown function
eggNOG-mapper	UHGV-0209443_30	1038922.PflQ2_3592	159.0	0	N/A	N/A
eggNOG-mapper	UHGV-0209443_31	1316927.ATKI01000043_gene2945	135.0	3.56e-41	N/A	N/A
eggNOG-mapper	UHGV-0209443_32	1038922.PflQ2_3594	137.0	3.33005e-41	N/A	N/A
PHROG	UHGV-0209443_33	phrog_2314	138.4	4.10006e-41	N/A	unknown function
eggNOG-mapper	UHGV-0209443_33	1226994.AMZB01000118_gene3263	231.0	0	N/A	N/A
eggNOG-mapper	UHGV-0209443_34	1282356.H045_14335	127.0	2.32e-37	N/A	N/A
PHROG	UHGV-0209443_35	phrog_874	240.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0209443_35	1357279.N018_13030	239.0	0	N/A	N/A
structural_annotation	UHGV-0209443_35	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-0209443_36	phrog_18088	57.6	1.8e-16	N/A	unknown function
PHROG	UHGV-0209443_37	phrog_17140	66.7	1.9e-19	N/A	unknown function
KOfam	UHGV-0209443_38	K14059	273.2	0	int; integrase	N/A
PHROG	UHGV-0209443_38	phrog_1	162.0	0	integrase	integration and excision
UniRef90	UHGV-0209443_38	UniRef90_A0A5E7VMF1	762.0	0	Defective protein IntQ	N/A
eggNOG-mapper	UHGV-0209443_38	1282356.H045_14350	796.0	0	Phage integrase family	N/A
Pfam	UHGV-0209443_38	PF12167	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_2
Pfam	UHGV-0209443_38	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0209443_38	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0209443_38	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0209443_38	PF00589,PF12167,PF14659,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A