UHGV-0210646 (vOTU-071288)

Viral Genome: UHGV-0210646

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0210646
vOTU ID	vOTU-071288
Representative Genome?	Yes
Source	CHVD
Original Genome ID	SAMN10290178_a1_ct5941_vs1@linear@Siphoviridae__sp._ctqCR1
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	91.71 (High-quality)
Trimmed?	No
CheckV Viral Markers	17
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.979
Viral Hallmark Genes (geNomad)	7
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	32.25
Jumbo Phage?	No

Genome Content
Length (bps)	26,058
GC Content	47.60%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	44
CDS Density	91%
Average CDS Length (bps)	541.57
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 91.71)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0210646_1	phrog_193	110.9	1.4e-32	head maturation protease	head and packaging
eggNOG-mapper	UHGV-0210646_1	748224.HMPREF9436_01469	195.0	0	N/A	N/A
COG	UHGV-0210646_1	COG5529	N/A	N/A	Phage-encoded DNA-binding protein ECs1768, contains HTH and DnaT DNA-binding domains	N/A
structural_annotation	UHGV-0210646_2	PF11344	N/A	N/A	N/A	N/A
PHROG	UHGV-0210646_3	phrog_355	61.0	1.6e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210646_3	UniRef90_A0A396KGT7	203.0	0	N/A	N/A
eggNOG-mapper	UHGV-0210646_3	97138.C820_00250	129.0	1.32e-37	N/A	N/A
Pfam	UHGV-0210646_3	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0210646_3	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0210646_4	phrog_1793	87.6	2e-25	head scaffolding protein	head and packaging
UniRef90	UHGV-0210646_4	UniRef90_A0A412EZF6	179.0	0	N/A	N/A
eggNOG-mapper	UHGV-0210646_4	1408304.JAHA01000007_gene1323	101.0	9.97e-26	N/A	N/A
Pfam	UHGV-0210646_4	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0210646_4	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0210646_5	phrog_10	110.1	2.4e-32	major head protein	head and packaging
UniRef90	UHGV-0210646_5	UniRef90_A0A844E6Z2	430.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0210646_5	205876.Q855V6_9CAUD	288.0	0	peptidase activity	N/A
Pfam	UHGV-0210646_5	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0210646_5	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0210646_5	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0210646_7	phrog_137	63.9	2.1e-18	head-tail adaptor Ad1	connector
UniRef90	UHGV-0210646_7	UniRef90_E2ZGA8	119.0	3.01e-32	Phage protein Gp19/Gp15/Gp42	N/A
Pfam	UHGV-0210646_7	PF09355	N/A	N/A	N/A	Phage_Gp19
structural_annotation	UHGV-0210646_7	PF09355	N/A	N/A	N/A	N/A
PHROG	UHGV-0210646_8	phrog_501	99.6	2.2e-29	head closure Hc1	connector
eggNOG-mapper	UHGV-0210646_8	665950.HMPREF1025_02528	172.0	0	N/A	N/A
structural_annotation	UHGV-0210646_8	PF12206,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0210646_9	phrog_387	61.0	1.8e-17	neck protein	connector
UniRef90	UHGV-0210646_9	UniRef90_A0A380KNT4	67.8	0.000000000000303	N/A	N/A
eggNOG-mapper	UHGV-0210646_9	1423775.BAMN01000011_gene600	82.4	8.2e-20	N/A	N/A
PHROG	UHGV-0210646_10	phrog_123	64.3	2.1e-18	tail terminator	connector
eggNOG-mapper	UHGV-0210646_10	1280698.AUJS01000007_gene1043	127.0	8.38e-37	N/A	N/A
structural_annotation	UHGV-0210646_10	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-0210646_11	phrog_117	167.0	0	major tail protein	tail
UniRef90	UHGV-0210646_11	UniRef90_A0A844E2C0	245.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0210646_11	1280698.AUJS01000007_gene1044	229.0	0	domain, Protein	N/A
COG	UHGV-0210646_11	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210646_11	PF04630,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0210646_12	phrog_1526	69.1	5.8e-20	N/A	unknown function
eggNOG-mapper	UHGV-0210646_12	879308.HMPREF9130_1240	57.8	0.000000000857	N/A	N/A
PHROG	UHGV-0210646_13	phrog_1633	135.8	1.50001e-40	N/A	unknown function
UniRef90	UHGV-0210646_13	UniRef90_A0A4U9XLC7	108.0	3.16e-28	N/A	N/A
eggNOG-mapper	UHGV-0210646_13	873448.STRPO_0293	108.0	5.3e-29	N/A	N/A
Pfam	UHGV-0210646_13	PF17318	N/A	N/A	N/A	DUF5361
structural_annotation	UHGV-0210646_13	PF17318	N/A	N/A	N/A	N/A
PHROG	UHGV-0210646_14	phrog_6900	265.4	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0210646_14	12390.Q77MU4_9CAUD	327.0	0	peptidoglycan catabolic process	N/A
structural_annotation	UHGV-0210646_14	MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0210646_15	phrog_20385	100.8	7.5e-30	minor tail protein	tail
eggNOG-mapper	UHGV-0210646_15	397287.C807_03967	211.0	0	N/A	N/A
structural_annotation	UHGV-0210646_15	PF16774,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0210646_16	phrog_7064	156.1	0	tail protein	tail
eggNOG-mapper	UHGV-0210646_16	1235800.C819_04023	288.0	0	N/A	N/A
structural_annotation	UHGV-0210646_16	PF14594,TIGR03361,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0210646_17	phrog_5811	101.7	6.8e-30	N/A	unknown function
eggNOG-mapper	UHGV-0210646_17	1235793.C809_04315	115.0	1.23e-26	Glycine rich protein	N/A
PHROG	UHGV-0210646_18	phrog_1084	42.9	0.0000000000076	N/A	unknown function
eggNOG-mapper	UHGV-0210646_18	910314.HMPREF9220_1078	82.0	8.61e-19	N/A	N/A
structural_annotation	UHGV-0210646_18	PF16407,NF032891,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0210646_20	phrog_13589	182.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0210646_20	411460.RUMTOR_01324	231.0	0	N/A	N/A
eggNOG-mapper	UHGV-0210646_21	428125.CLOLEP_01435	53.9	0.00000157	N/A	N/A
PHROG	UHGV-0210646_22	phrog_937	53.7	0.0000000000000039	hemolysin	other
UniRef90	UHGV-0210646_22	UniRef90_R5GGW2	63.9	0.0000000000547	Phosphoglucosamine mutase	N/A
eggNOG-mapper	UHGV-0210646_22	742740.HMPREF9474_03172	72.8	0.00000000000000291	N/A	N/A
PHROG	UHGV-0210646_23	phrog_1129	77.6	9.7e-23	holin	lysis
UniRef90	UHGV-0210646_23	UniRef90_UPI001C0F499E	135.0	8.08e-40	phage holin family protein	N/A
eggNOG-mapper	UHGV-0210646_23	702450.CUW_0551	117.0	2.82e-33	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0210646_23	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0210646_23	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0210646_24	K01448	45.4	0.000000000001	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0210646_24	phrog_435	85.8	7.1e-25	endolysin	lysis
UniRef90	UHGV-0210646_24	UniRef90_UPI00164BDABC	124.0	8.83e-30	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0210646_24	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
KOfam	UHGV-0210646_25	K14059	76.0	7.1e-22	int; integrase	N/A
PHROG	UHGV-0210646_25	phrog_1	115.6	5.6e-34	integrase	integration and excision
UniRef90	UHGV-0210646_25	UniRef90_UPI00101EF3B7	528.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0210646_25	1235792.C808_04693	455.0	0	Belongs to the 'phage' integrase family	N/A
COG	UHGV-0210646_25	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0210646_25	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0210646_26	phrog_7115	138.4	2.20004e-41	N/A	unknown function
UniRef90	UHGV-0210646_26	UniRef90_A0A396KU40	304.0	0	PH domain-containing protein	N/A
eggNOG-mapper	UHGV-0210646_26	1280698.AUJS01000007_gene1000	301.0	0	Bacterial PH domain	N/A
Pfam	UHGV-0210646_26	PF08000	N/A	N/A	Bacterial PH domain	bPH_1
PHROG	UHGV-0210646_27	phrog_87	90.3	1.5e-26	metallo-protease	other
UniRef90	UHGV-0210646_27	UniRef90_UPI001D02322C	192.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0210646_27	1235792.C808_05259	174.0	0	Zn peptidase	N/A
Pfam	UHGV-0210646_27	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0210646_27	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0210646_27	PF06114,COG3800	N/A	N/A	N/A	N/A
KOfam	UHGV-0210646_28	K07727	44.3	0.0000000000043	K07727; putative transcriptional regulator	N/A
PHROG	UHGV-0210646_28	phrog_8	47.4	0.00000000000046	transcriptional regulator	transcription regulation
UniRef90	UHGV-0210646_28	UniRef90_A0A3R6ILK5	173.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0210646_28	1256908.HMPREF0373_00219	82.0	6.46e-19	sequence-specific DNA binding	N/A
Pfam	UHGV-0210646_28	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0210646_28	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0210646_28	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0210646_29	UniRef90_A0A3D5L8I7	110.0	1.13e-30	DNA-binding protein	N/A
Pfam	UHGV-0210646_29	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0210646_29	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0210646_30	UniRef90_A0A416P573	99.4	5.86e-26	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0210646_30	1235792.C808_05261	97.8	4.59e-26	N/A	N/A
structural_annotation	UHGV-0210646_30	PF05339,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0210646_31	UniRef90_A0A3A9F894	63.9	0.00000000000358	DNA-binding protein	N/A
PHROG	UHGV-0210646_36	phrog_3584	177.8	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210646_36	UniRef90_A0A1I5LZL1	162.0	1.4013e-45	Relaxase/Mobilisation nuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-0210646_36	1196322.A370_05744	188.0	0	N/A	N/A
structural_annotation	UHGV-0210646_36	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-0210646_37	phrog_531	43.2	0.0000000000054	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210646_37	UniRef90_F3AAS5	113.0	2.26e-29	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0210646_37	573065.Astex_1568	55.5	0.000000116	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-0210646_37	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0210646_37	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0210646_37	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
KOfam	UHGV-0210646_39	K03111	131.6	9.2e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0210646_39	phrog_44	135.8	2.8e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210646_39	UniRef90_A0A7G9G0M5	198.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0210646_39	411459.RUMOBE_00993	189.0	0	N/A	N/A
Pfam	UHGV-0210646_39	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0210646_39	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0210646_39	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0210646_39	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0210646_39	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0210646_40	411468.CLOSCI_00555	65.9	0.000000000128	N/A	N/A
PHROG	UHGV-0210646_41	phrog_7566	107.9	3.7e-32	N/A	unknown function
eggNOG-mapper	UHGV-0210646_41	411459.RUMOBE_00948	133.0	6.2e-39	N/A	N/A
eggNOG-mapper	UHGV-0210646_42	1235792.C808_00065	234.0	0	N/A	N/A
PHROG	UHGV-0210646_43	phrog_8470	354.0	0	N/A	unknown function
UniRef90	UHGV-0210646_43	UniRef90_UPI001D086F83	933.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0210646_43	97139.C824_00039	996.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0210646_43	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0210646_43	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0210646_44	phrog_15077	113.7	3e-33	N/A	unknown function
UniRef90	UHGV-0210646_44	UniRef90_UPI001D0741A0	173.0	0	N/A	N/A
eggNOG-mapper	UHGV-0210646_44	97139.C824_05986	310.0	0	N/A	N/A