UHGV-0215471 (vOTU-105417)

Viral Genome: UHGV-0215471

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0215471
vOTU ID	vOTU-105417
Representative Genome?	Yes
Source	mMGE
Original Genome ID	SRR6048474_141_17664_round347~1557583
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	55.67 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	12
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9736
Viral Hallmark Genes (geNomad)	3
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	36.08
Jumbo Phage?	No

Genome Content
Length (bps)	20,518
GC Content	35.06%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	44
CDS Density	95%
Average CDS Length (bps)	441.82
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 55.67)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
Pfam	UHGV-0215471_1	PF02037	N/A	N/A	SAP domain	SAP
KOfam	UHGV-0215471_2	K22300	56.7	1.3e-19	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0215471_2	phrog_8	76.5	3.3e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0215471_2	UniRef90_A0A6B1RX79	317.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0215471_2	552396.HMPREF0863_00300	114.0	2.71e-29	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0215471_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0215471_2	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
UniRef90	UHGV-0215471_3	UniRef90_UPI00189B926E	60.5	0.0000000000958	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0215471_3	768486.EHR_02785	59.3	0.0000000000507	N/A	N/A
structural_annotation	UHGV-0215471_3	PF05339,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0215471_4	phrog_989	83.0	1.7e-24	N/A	unknown function
UniRef90	UHGV-0215471_4	UniRef90_UPI001E08B278	63.5	0.00000000000504	transcriptional regulator	N/A
eggNOG-mapper	UHGV-0215471_4	552396.HMPREF0863_00296	120.0	1.83e-35	N/A	N/A
PHROG	UHGV-0215471_6	phrog_585	115.9	2.4e-34	N/A	unknown function
UniRef90	UHGV-0215471_6	UniRef90_UPI001F52F0FC	113.0	8.93e-30	N/A	N/A
eggNOG-mapper	UHGV-0215471_6	1280692.AUJL01000009_gene2980	112.0	2.68e-30	N/A	N/A
Pfam	UHGV-0215471_6	PF10711	N/A	N/A	N/A	DUF2513
structural_annotation	UHGV-0215471_6	PF10711,MF_01819,TIGR03433,COG3432	N/A	N/A	N/A	N/A
PHROG	UHGV-0215471_7	phrog_373	134.8	6.6e-40	anti-repressor	transcription regulation
UniRef90	UHGV-0215471_7	UniRef90_UPI000246CFB6	473.0	0	ORF6C domain-containing protein	N/A
eggNOG-mapper	UHGV-0215471_7	1304866.K413DRAFT_3008	201.0	0	Phage regulatory protein	N/A
Pfam	UHGV-0215471_7	PF10543	N/A	N/A	ORF6N domain	ORF6N
Pfam	UHGV-0215471_7	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-0215471_7	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0215471_7	PF10552,PF10543,TIGR02681,COG3646	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0215471_9	PF10922	N/A	N/A	N/A	N/A
PHROG	UHGV-0215471_10	phrog_2139	131.4	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0215471_10	UniRef90_UPI000246CFB3	636.0	0	PD-(D/E)XK nuclease family protein	N/A
eggNOG-mapper	UHGV-0215471_10	428127.EUBDOL_01249	496.0	0	N/A	N/A
Pfam	UHGV-0215471_10	PF12705	N/A	N/A	PD-(D/E)XK nuclease superfamily	PDDEXK_1
structural_annotation	UHGV-0215471_10	PF12705,MF_03030,TIGR04328,COG2251	N/A	N/A	N/A	N/A
PHROG	UHGV-0215471_11	phrog_155	148.6	3.22299e-44	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0215471_11	UniRef90_UPI000246CFB2	464.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0215471_11	929506.CbC4_1193	150.0	1.59047e-42	ERF superfamily	N/A
Pfam	UHGV-0215471_11	PF04404	N/A	N/A	ERF superfamily	ERF
PHROG	UHGV-0215471_12	phrog_7370	63.6	2.6e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0215471_12	UniRef90_UPI000C81F1CB	95.5	1.48e-23	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0215471_12	1232449.BAHV02000016_gene1841	100.0	3.2e-26	HNH nucleases	N/A
PHROG	UHGV-0215471_13	phrog_72	53.7	0.0000000000000018	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0215471_13	428127.EUBDOL_01246	280.0	0	N/A	N/A
Pfam	UHGV-0215471_13	PF05772	N/A	N/A	NinB protein	NinB
structural_annotation	UHGV-0215471_13	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0215471_15	phrog_20891	55.8	9e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0215471_15	UniRef90_UPI000246CFAF	341.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0215471_15	1444310.JANV01000162_gene1198	57.0	0.000000216	HNH endonuclease	N/A
Pfam	UHGV-0215471_15	PF13392	N/A	N/A	HNH endonuclease	HNH_3
PHROG	UHGV-0215471_16	phrog_1163	250.9	0	N/A	unknown function
UniRef90	UHGV-0215471_16	UniRef90_UPI000246CFAE	573.0	0	conserved phage C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0215471_16	762051.LKI_09560	249.0	0	DnaD domain protein	N/A
Pfam	UHGV-0215471_16	PF09524	N/A	N/A	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
NCBIFam	UHGV-0215471_16	TIGR02220.1	N/A	N/A	phage conserved hypothetical protein, C-terminal domain	N/A
COG	UHGV-0215471_16	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0215471_16	PF09681,TIGR01714	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0215471_18	PF02768,PF02767,MF_00317,TIGR00663,COG0592	N/A	N/A	N/A	N/A
KOfam	UHGV-0215471_20	K03148	86.9	2.1e-25	thiF; sulfur carrier protein ThiS adenylyltransferase [EC:2.7.7.73]	N/A
UniRef90	UHGV-0215471_20	UniRef90_UPI001BCD2645	447.0	0	ThiF family adenylyltransferase	N/A
eggNOG-mapper	UHGV-0215471_20	428127.EUBDOL_01242	317.0	0	ThiF family	N/A
Pfam	UHGV-0215471_20	PF00899	N/A	N/A	ThiF family	ThiF
COG	UHGV-0215471_20	COG0476	N/A	N/A	Molybdopterin or thiamine biosynthesis adenylyltransferase	N/A
structural_annotation	UHGV-0215471_20	PF00899,MF_03049,TIGR03736,COG0476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0215471_22	UniRef90_A0A318KPZ6	170.0	0	E2/UBC family protein D	N/A
structural_annotation	UHGV-0215471_22	PF14460,TIGR03737	N/A	N/A	N/A	N/A
PHROG	UHGV-0215471_25	phrog_874	162.4	0	N/A	unknown function
UniRef90	UHGV-0215471_25	UniRef90_A0A3P6JHM7	147.0	3.43e-40	Upf86.8	N/A
eggNOG-mapper	UHGV-0215471_25	1232449.BAHV02000016_gene1832	144.0	3.25999e-40	N/A	N/A
structural_annotation	UHGV-0215471_25	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
KOfam	UHGV-0215471_28	K03111	149.6	2.94273e-44	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0215471_28	phrog_44	153.1	1.4013e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0215471_28	UniRef90_A0A4R3TFM5	262.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0215471_28	552396.HMPREF0863_00560	228.0	0	COG COG0629 Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0215471_28	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0215471_28	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0215471_28	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0215471_28	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0215471_28	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0215471_30	phrog_23707	58.0	1.7e-16	N/A	unknown function
eggNOG-mapper	UHGV-0215471_30	552398.HMPREF0866_01624	60.5	0.000000000512	N/A	N/A
structural_annotation	UHGV-0215471_37	PF05263,MF_00245,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0215471_38	phrog_419	100.5	2e-29	N/A	unknown function
UniRef90	UHGV-0215471_38	UniRef90_A6MAI4	155.0	0	Gp119	N/A
eggNOG-mapper	UHGV-0215471_38	388452.A6MAI4_9CAUD	155.0	0	N/A	N/A
KOfam	UHGV-0215471_41	K07474	99.3	6.8e-29	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0215471_41	phrog_2606	330.1	0	terminase small subunit	head and packaging
UniRef90	UHGV-0215471_41	UniRef90_UPI000E52C41D	356.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0215471_41	428127.EUBDOL_01230	293.0	0	terminase (Small subunit)	N/A
Pfam	UHGV-0215471_41	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
Pfam	UHGV-0215471_41	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0215471_41	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0215471_41	PF03592,PF10668,NF040601,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0215471_42	K06909	145.5	5.10073e-43	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0215471_42	phrog_10250	227.5	0	N/A	unknown function
UniRef90	UHGV-0215471_42	UniRef90_A0A372SK29	776.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0215471_42	411490.ANACAC_00783	631.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0215471_42	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0215471_42	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0215471_42	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0215471_42	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0215471_42	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0215471_43	phrog_64	308.0	0	portal protein	head and packaging
UniRef90	UHGV-0215471_43	UniRef90_A0A372SML8	626.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0215471_43	203119.Cthe_2475	367.0	0	phage portal protein, SPP1	N/A
Pfam	UHGV-0215471_43	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0215471_43	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0215471_44	phrog_115	72.9	2.9e-21	minor head protein	head and packaging
UniRef90	UHGV-0215471_44	UniRef90_A0A6M0V753	145.0	3.11e-40	Phage head morphogenesis protein	N/A
eggNOG-mapper	UHGV-0215471_44	411468.CLOSCI_00291	108.0	1.04e-26	Phage head morphogenesis protein, SPP1 gp7 family	N/A
COG	UHGV-0215471_44	COG2369	N/A	N/A	N/A	N/A