UHGV-0219377 (vOTU-105339)

Viral Genome: UHGV-0219377

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0219377
vOTU ID	vOTU-105339
Representative Genome?	Yes
Source	CHVD
Original Genome ID	SRS146888_a1_ct67453_vs01@Caudovirales__sp._ctlHD74@linear
Associated Biosample	SAMN00146105
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	56.85 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	15
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9818
Viral Hallmark Genes (geNomad)	7
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	17.47
Jumbo Phage?	No

Genome Content
Length (bps)	20,129
GC Content	39.61%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	26
CDS Density	98%
Average CDS Length (bps)	754.96
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 56.85)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0219377_1	706433.HMPREF9430_01275	76.6	4.79e-17	N/A	N/A
KOfam	UHGV-0219377_2	K07474	96.9	4.3e-28	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0219377_2	phrog_51	109.4	3.2e-32	terminase small subunit	head and packaging
UniRef90	UHGV-0219377_2	UniRef90_UPI00138B0CFF	301.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-0219377_2	1123263.AUKY01000111_gene1092	301.0	0	DNA packaging	N/A
Pfam	UHGV-0219377_2	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0219377_2	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0219377_2	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0219377_3	K06909	102.2	6.3e-30	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0219377_3	phrog_2	60.4	3.9e-17	terminase large subunit	head and packaging
UniRef90	UHGV-0219377_3	UniRef90_D2MPJ1	883.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0219377_3	1123263.AUKY01000111_gene1093	902.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0219377_3	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0219377_3	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0219377_4	phrog_533	278.7	0	portal protein	head and packaging
UniRef90	UHGV-0219377_4	UniRef90_A0A1C6GX09	467.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0219377_4	1123263.AUKY01000111_gene1094	543.0	0	N/A	N/A
Pfam	UHGV-0219377_4	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0219377_4	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0219377_5	phrog_581	187.1	0	minor head protein	head and packaging
UniRef90	UHGV-0219377_5	UniRef90_UPI001D0157A8	318.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0219377_5	679192.HMPREF9013_1305	508.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0219377_5	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
structural_annotation	UHGV-0219377_5	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0219377_8	phrog_2303	122.4	4.3e-36	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0219377_8	1123263.AUKY01000051_gene1081	308.0	0	N/A	N/A
PHROG	UHGV-0219377_9	phrog_422	297.7	0	major head protein	head and packaging
UniRef90	UHGV-0219377_9	UniRef90_A0A3E2WBR9	380.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0219377_9	483218.BACPEC_01155	368.0	0	N/A	N/A
structural_annotation	UHGV-0219377_9	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0219377_10	phrog_1378	62.4	6.4e-18	N/A	unknown function
eggNOG-mapper	UHGV-0219377_10	195103.CPF_0957	53.9	0.0000000199	N/A	N/A
PHROG	UHGV-0219377_11	phrog_541	89.2	3.8e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0219377_11	1123263.AUKY01000051_gene1078	258.0	0	N/A	N/A
PHROG	UHGV-0219377_12	phrog_8710	117.9	4.5e-35	N/A	unknown function
eggNOG-mapper	UHGV-0219377_12	1123263.AUKY01000051_gene1077	236.0	0	N/A	N/A
structural_annotation	UHGV-0219377_12	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0219377_13	phrog_556	45.9	0.00000000000086	minor head protein	head and packaging
eggNOG-mapper	UHGV-0219377_13	1123263.AUKY01000051_gene1076	251.0	0	N/A	N/A
PHROG	UHGV-0219377_14	phrog_2595	92.1	4.9e-27	head-tail connector protein	connector
UniRef90	UHGV-0219377_14	UniRef90_UPI001D0627B3	125.0	1.16e-34	minor capsid protein	N/A
eggNOG-mapper	UHGV-0219377_14	1123263.AUKY01000051_gene1075	265.0	0	N/A	N/A
Pfam	UHGV-0219377_14	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0219377_14	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0219377_15	phrog_820	118.1	5.1e-35	major tail protein	tail
eggNOG-mapper	UHGV-0219377_15	1123263.AUKY01000051_gene1074	301.0	0	N/A	N/A
structural_annotation	UHGV-0219377_15	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0219377_16	phrog_8300	91.7	5.9e-27	N/A	unknown function
eggNOG-mapper	UHGV-0219377_16	1123263.AUKY01000051_gene1073	195.0	0	N/A	N/A
structural_annotation	UHGV-0219377_16	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-0219377_17	phrog_8355	92.3	2.1e-27	N/A	unknown function
UniRef90	UHGV-0219377_17	UniRef90_UPI001F170E6A	113.0	5.24e-30	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0219377_17	1123263.AUKY01000051_gene1072	203.0	0	N/A	N/A
Pfam	UHGV-0219377_17	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0219377_17	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0219377_18	phrog_1535	276.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0219377_18	UniRef90_A0A1C5TVU6	376.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-0219377_18	1123263.AUKY01000051_gene1071	1263.0	0	tape measure	N/A
COG	UHGV-0219377_18	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0219377_18	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0219377_19	phrog_1194	57.0	3.2e-16	N/A	unknown function
eggNOG-mapper	UHGV-0219377_19	1123263.AUKY01000051_gene1070	248.0	0	N/A	N/A
structural_annotation	UHGV-0219377_19	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0219377_20	phrog_6616	53.0	0.0000000000000031	tail protein	tail
eggNOG-mapper	UHGV-0219377_20	1123263.AUKY01000051_gene1069	1383.0	0	cellulase activity	N/A
COG	UHGV-0219377_20	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0219377_20	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0219377_21	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
Pfam	UHGV-0219377_22	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
PHROG	UHGV-0219377_23	phrog_918	98.2	4.4e-29	N/A	unknown function
UniRef90	UHGV-0219377_23	UniRef90_UPI00066B873E	108.0	2.55e-29	N/A	N/A
eggNOG-mapper	UHGV-0219377_23	1123263.AUKY01000046_gene482	143.0	1.89175e-43	N/A	N/A
Pfam	UHGV-0219377_23	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0219377_23	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0219377_24	phrog_20258	45.0	0.0000000000016	N/A	unknown function
eggNOG-mapper	UHGV-0219377_24	929506.CbC4_0850	67.4	0.000000000000293	N/A	N/A
KOfam	UHGV-0219377_25	K07273	173.6	0	acm; lysozyme	N/A
PHROG	UHGV-0219377_25	phrog_291	182.4	0	endolysin	lysis
UniRef90	UHGV-0219377_25	UniRef90_A0A173YD53	279.0	0	LysM peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0219377_25	521003.COLINT_02363	208.0	0	CW_7 repeat	N/A
Pfam	UHGV-0219377_25	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0219377_25	PF08230	N/A	N/A	CW_7 repeat	CW_7
Pfam	UHGV-0219377_25	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0219377_25	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0219377_25	PF01183,PF01476,TIGR02899,COG3757,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-0219377_26	phrog_37604	75.4	6.5e-22	N/A	unknown function
eggNOG-mapper	UHGV-0219377_26	1123075.AUDP01000020_gene1531	76.6	7.98e-16	N/A	N/A