UHGV-0249630 (vOTU-006448)

Viral Genome: UHGV-0249630

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0249630
vOTU ID	vOTU-006448
Representative Genome?	Yes
Source	mMGE
Original Genome ID	SRR9161530_141_1809_round8-12~3360087
Associated Biosample	SAMN04414080
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	26
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.957
Viral Hallmark Genes (geNomad)	7
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	26.94
Jumbo Phage?	No

Genome Content
Length (bps)	41,761
GC Content	34.73%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	63
CDS Density	91%
Average CDS Length (bps)	605.81
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0249630_1	K09960	41.8	0.000000000016	N/A	N/A
PHROG	UHGV-0249630_1	phrog_18222	54.0	8.1e-16	N/A	unknown function
eggNOG-mapper	UHGV-0249630_1	457398.HMPREF0326_03185	66.2	0.0000000188	N/A	N/A
Pfam	UHGV-0249630_1	PF09979	N/A	N/A	N/A	DUF2213
Pfam	UHGV-0249630_1	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
PHROG	UHGV-0249630_2	phrog_673	48.7	0.00000000000013	head scaffolding protein	head and packaging
Pfam	UHGV-0249630_2	PF09956	N/A	N/A	N/A	DUF2190
structural_annotation	UHGV-0249630_2	PF11133,COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-0249630_3	phrog_264	91.1	1.1e-26	major head protein	head and packaging
UniRef90	UHGV-0249630_3	UniRef90_A0A843GVJ4	305.0	0	N/A	N/A
Pfam	UHGV-0249630_3	PF09950	N/A	N/A	N/A	DUF2184
structural_annotation	UHGV-0249630_3	PF09950,MF_04113,NF041155,COG4834	N/A	N/A	N/A	N/A
UniRef90	UHGV-0249630_5	UniRef90_A0A4R5DYU6	135.0	5.39e-37	N/A	N/A
PHROG	UHGV-0249630_6	phrog_222	57.0	3.9e-16	tail protein	tail
structural_annotation	UHGV-0249630_7	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0249630_8	PF06141	N/A	N/A	N/A	N/A
PHROG	UHGV-0249630_9	phrog_205	212.3	0	virion structural protein	head and packaging
UniRef90	UHGV-0249630_9	UniRef90_A0A843HMH9	284.0	0	N/A	N/A
eggNOG-mapper	UHGV-0249630_9	220341.16502212	166.0	7.00649e-45	N/A	N/A
Pfam	UHGV-0249630_9	PF11863	N/A	N/A	N/A	DUF3383
structural_annotation	UHGV-0249630_9	PF11863,COG3497	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0249630_10	PF11681,TIGR02241,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0249630_13	phrog_817	59.8	1.9e-17	tail fiber protein	tail
Pfam	UHGV-0249630_13	PF21821	N/A	N/A	Dit-like phage tail protein	Dit_like
structural_annotation	UHGV-0249630_13	PF21821,TIGR01633,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-0249630_15	K19304	150.6	1.26117e-44	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-0249630_15	phrog_196	122.7	2.6e-36	virion structural protein	head and packaging
UniRef90	UHGV-0249630_15	UniRef90_A0A2P8WEQ6	124.0	3.91e-28	Peptidase M23	N/A
eggNOG-mapper	UHGV-0249630_15	1007104.SUS17_2062	137.0	7.78e-33	membrane	N/A
Pfam	UHGV-0249630_15	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
COG	UHGV-0249630_15	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-0249630_15	PF01551,PF05113,NF008644,TIGR01665,COG0739,COG3500	N/A	N/A	N/A	N/A
UniRef90	UHGV-0249630_16	UniRef90_H9C0N7	90.1	3.84e-18	Putative baseplate protein	N/A
eggNOG-mapper	UHGV-0249630_16	1127515.H9C0N7_9CAUD	90.1	6.44e-19	N/A	N/A
Pfam	UHGV-0249630_16	PF18352	N/A	N/A	N/A	Gp138_N
PHROG	UHGV-0249630_17	phrog_120	69.8	3.7e-20	baseplate protein	tail
UniRef90	UHGV-0249630_17	UniRef90_A0A2G0QB77	85.9	2.81e-19	Bacteriophage protein	N/A
eggNOG-mapper	UHGV-0249630_17	1127515.H9C0N8_9CAUD	99.8	1.68e-25	N/A	N/A
structural_annotation	UHGV-0249630_17	PF04965,TIGR03357,COG3628	N/A	N/A	N/A	N/A
PHROG	UHGV-0249630_18	phrog_6	120.0	2.5e-35	baseplate protein	tail
UniRef90	UHGV-0249630_18	UniRef90_A0A843HZX9	267.0	0	Baseplate_J domain-containing protein	N/A
eggNOG-mapper	UHGV-0249630_18	160492.XF_1704	144.0	2.43e-36	homolog of phage Mu protein gp47	N/A
COG	UHGV-0249630_18	COG3299	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0249630_18	PF03434,PF21379,PF21110,MF_04102,TIGR02243,COG3299	N/A	N/A	N/A	N/A
PHROG	UHGV-0249630_19	phrog_587	109.1	3.1e-32	structural protein	head and packaging
UniRef90	UHGV-0249630_19	UniRef90_A0A431IBL9	103.0	3.86e-23	N/A	N/A
eggNOG-mapper	UHGV-0249630_19	230158.Q7Y5S3_9CAUD	89.0	7.77e-19	N/A	N/A
Pfam	UHGV-0249630_19	PF11041	N/A	N/A	N/A	DUF2612
PHROG	UHGV-0249630_20	phrog_9116	49.7	0.000000000000019	tail protein	tail
UniRef90	UHGV-0249630_20	UniRef90_A0A1Q6V2E2	129.0	5.68e-33	Collar domain-containing protein	N/A
eggNOG-mapper	UHGV-0249630_20	556269.ACDQ01000006_gene1544	80.1	0.0000000000000452	Phage Tail Collar Domain	N/A
Pfam	UHGV-0249630_20	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
COG	UHGV-0249630_20	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0249630_20	PF07484,COG4675	N/A	N/A	N/A	N/A
PHROG	UHGV-0249630_21	phrog_105	45.5	0.0000000000009	tail fiber assembly	tail
UniRef90	UHGV-0249630_21	UniRef90_R5HL88	185.0	0	Bacteriophage-acquired protein	N/A
PHROG	UHGV-0249630_24	phrog_1158	62.2	6.8e-18	tail assembly chaperone	tail
UniRef90	UHGV-0249630_24	UniRef90_UPI000FBDA423	59.7	0.0000000436	N/A	N/A
eggNOG-mapper	UHGV-0249630_24	395492.Rleg2_3602	52.0	0.0000058	N/A	N/A
Pfam	UHGV-0249630_24	PF07087	N/A	N/A	N/A	DUF1353
structural_annotation	UHGV-0249630_24	PF07087	N/A	N/A	N/A	N/A
KOfam	UHGV-0249630_26	K08640	104.6	1.5e-30	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0249630_26	phrog_894	106.0	3.8e-31	endolysin	lysis
UniRef90	UHGV-0249630_26	UniRef90_UPI001A91A5CE	135.0	4.12e-38	D-Ala-D-Ala carboxypeptidase family metallohydrolase	N/A
eggNOG-mapper	UHGV-0249630_26	1122990.BAJH01000031_gene2548	133.0	3.96e-38	Peptidase M15	N/A
Pfam	UHGV-0249630_26	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0249630_26	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0249630_26	PF08291,COG3108	N/A	N/A	N/A	N/A
KOfam	UHGV-0249630_28	K14059	195.0	0	int; integrase	N/A
PHROG	UHGV-0249630_28	phrog_1	188.6	0	integrase	integration and excision
UniRef90	UHGV-0249630_28	UniRef90_A0A7T5EN48	115.0	1.57e-25	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0249630_28	1121121.KB894311_gene4223	107.0	2.2e-23	Phage integrase family	N/A
Pfam	UHGV-0249630_28	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-0249630_28	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0249630_28	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0249630_28	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0249630_32	phrog_954	218.7	0	DNA methyltransferase	other
UniRef90	UHGV-0249630_32	UniRef90_UPI000986E416	223.0	0	class I SAM-dependent methyltransferase	N/A
eggNOG-mapper	UHGV-0249630_32	1497679.EP56_08135	212.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
PADLOC	UHGV-0249630_32	MTase_II_00074	197.6	0	Type II methyltransferase	RM
Pfam	UHGV-0249630_32	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-0249630_32	COG0500	N/A	N/A	SAM-dependent methyltransferase	N/A
structural_annotation	UHGV-0249630_32	PF01170,MF_01057,TIGR00446,COG4123	N/A	N/A	N/A	N/A
PHROG	UHGV-0249630_35	phrog_625	49.1	0.000000000000086	N/A	unknown function
UniRef90	UHGV-0249630_35	UniRef90_A0A8H9ULC9	55.1	0.000000125	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0249630_35	358220.C380_10765	53.1	0.000000107	N/A	N/A
structural_annotation	UHGV-0249630_35	PF12961,MF_00684,COG4043	N/A	N/A	N/A	N/A
KOfam	UHGV-0249630_36	K14979	54.5	0.000000000000001	ssrB; two-component system, LuxR family, secretion system response regulator SsrB	N/A
PHROG	UHGV-0249630_36	phrog_323	42.9	0.0000000000038	endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0249630_36	1122214.AQWH01000002_gene4380	52.0	0.00000369	response regulator	N/A
Pfam	UHGV-0249630_36	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
COG	UHGV-0249630_36	COG4566	N/A	N/A	DNA-binding response regulator, FixJ family, consists of REC and HTH domains	N/A
KOfam	UHGV-0249630_40	K07696	47.4	0.00000000000032	nreC; two-component system, NarL family, response regulator NreC	N/A
UniRef90	UHGV-0249630_40	UniRef90_A0A1Q6U537	109.0	6.6e-30	HTH luxR-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0249630_40	1120973.AQXL01000125_gene3189	52.8	0.000000306	helix_turn_helix, Lux Regulon	N/A
Pfam	UHGV-0249630_40	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
COG	UHGV-0249630_40	COG2197	N/A	N/A	DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains	N/A
structural_annotation	UHGV-0249630_40	PF00196,MF_00674,TIGR00721,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-0249630_41	K01160	55.7	0.0000000000000014	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0249630_41	phrog_34	40.2	0.000000000061	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0249630_41	UniRef90_A0A6B9SRR2	114.0	5.31e-30	Endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0249630_41	796940.HMPREF9628_00163	102.0	4.13e-26	Endodeoxyribonuclease RusA	N/A
COG	UHGV-0249630_41	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0249630_41	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0249630_43	phrog_2514	92.1	4.5e-27	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0249630_43	428127.EUBDOL_01512	106.0	8.14e-25	DnaD domain protein	N/A
COG	UHGV-0249630_43	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
PHROG	UHGV-0249630_44	phrog_1227	267.3	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0249630_44	UniRef90_A0A1Q6U4Y5	483.0	0	N/A	N/A
eggNOG-mapper	UHGV-0249630_44	861454.HMPREF9099_00347	272.0	0	N/A	N/A
Pfam	UHGV-0249630_44	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-0249630_44	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0249630_44	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-0249630_45	phrog_3657	314.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0249630_45	1121864.OMO_02139	256.0	0	N/A	N/A
eggNOG-mapper	UHGV-0249630_48	563031.HMPREF0666_01114	103.0	5.25e-23	N/A	N/A
structural_annotation	UHGV-0249630_48	NF041351	N/A	N/A	N/A	N/A
KOfam	UHGV-0249630_50	K01356	73.7	3.3e-21	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0249630_50	phrog_4	101.5	1.1e-29	transcriptional repressor	transcription regulation
UniRef90	UHGV-0249630_50	UniRef90_A0A843HRP3	149.0	6.16992e-42	Peptidase_S24 domain-containing protein	N/A
eggNOG-mapper	UHGV-0249630_50	279714.FuraDRAFT_0264	58.9	0.000000136	Peptidase S24-like	N/A
Pfam	UHGV-0249630_50	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0249630_50	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0249630_50	PF00717,MF_00015,TIGR00498,COG2932	N/A	N/A	N/A	N/A
KOfam	UHGV-0249630_52	K07504	390.5	0	K07504; predicted type IV restriction endonuclease	N/A
PHROG	UHGV-0249630_52	phrog_4225	357.5	0	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0249630_52	UniRef90_A0A1F6S8I9	313.0	0	HSDR_N_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0249630_52	879212.DespoDRAFT_03446	292.0	0	PFAM Type I restriction enzyme R protein N terminus (HSDR_N)	N/A
Pfam	UHGV-0249630_52	PF04313	N/A	N/A	Type I restriction enzyme R protein N terminus (HSDR_N)	HSDR_N
COG	UHGV-0249630_52	COG4748	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0249630_52	PF13588,TIGR04256,COG4748	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0249630_53	1536770.R50345_07130	85.5	5.29e-16	N/A	N/A
Pfam	UHGV-0249630_54	PF08795	N/A	N/A	N/A	DUF1796
eggNOG-mapper	UHGV-0249630_55	398767.Glov_0494	98.6	3.58e-24	N/A	N/A
structural_annotation	UHGV-0249630_55	PF09499,COG4998	N/A	N/A	N/A	N/A
PHROG	UHGV-0249630_56	phrog_1914	81.7	9e-24	N/A	unknown function
UniRef90	UHGV-0249630_56	UniRef90_A0A1F5TFY2	118.0	1.54e-30	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-0249630_56	309799.DICTH_0514	80.5	6.59e-17	Zn peptidase	N/A
Pfam	UHGV-0249630_56	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0249630_56	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0249630_56	PF06114,COG2856	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0249630_58	PF00210,MF_01441,NF006975,COG0783	N/A	N/A	N/A	N/A
PHROG	UHGV-0249630_59	phrog_2412	55.3	1.3e-21	N/A	unknown function
UniRef90	UHGV-0249630_59	UniRef90_UPI000DE85101	60.1	0.00000000456	stress-induced protein	N/A
eggNOG-mapper	UHGV-0249630_59	563192.HMPREF0179_00168	73.9	0.00000000000000196	N/A	N/A
PHROG	UHGV-0249630_60	phrog_38	298.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0249630_60	UniRef90_A0A843HLI4	338.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0249630_60	1437882.AZRU01000132_gene6658	295.0	0	Terminase RNaseH-like domain	N/A
Pfam	UHGV-0249630_60	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0249630_60	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-0249630_60	COG5362	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0249630_60	PF17289,PF03237,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
KOfam	UHGV-0249630_61	K09961	196.9	0	N/A	N/A
PHROG	UHGV-0249630_61	phrog_146	195.0	0	portal protein	head and packaging
UniRef90	UHGV-0249630_61	UniRef90_A0A843HMH0	359.0	0	N/A	N/A
eggNOG-mapper	UHGV-0249630_61	1127515.H9C0L9_9CAUD	234.0	0	N/A	N/A
Pfam	UHGV-0249630_61	PF06381	N/A	N/A	Anti-CBASS protein Acb1-like	Abc1-like
structural_annotation	UHGV-0249630_61	PF06381,MF_04135,TIGR01555,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0249630_62	phrog_324	125.8	4.3e-37	head morphogenesis	head and packaging
UniRef90	UHGV-0249630_62	UniRef90_A0A843GSS7	200.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0249630_62	742740.HMPREF9474_03145	85.5	4.2e-16	Phage Mu protein F like protein	N/A
Pfam	UHGV-0249630_62	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0249630_62	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0249630_62	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0249630_62	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A