UHGV-0260338 (vOTU-049732)

Viral Genome: UHGV-0260338

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0260338
vOTU ID	vOTU-049732
Representative Genome?	Yes
Source	mMGE
Original Genome ID	k141_1109_round8-12~866434
Associated Biosample	SAMEA3888925
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	17
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9731
Viral Hallmark Genes (geNomad)	12
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	30.38
Jumbo Phage?	No

Genome Content
Length (bps)	39,842
GC Content	42.19%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	53
CDS Density	94%
Average CDS Length (bps)	705.79
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0260338_1	610130.Closa_1360	92.8	2.95e-21	Belongs to the 'phage' integrase family	N/A
COG	UHGV-0260338_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0260338_3	PF00227,MF_02113_A,TIGR03634,COG0638	N/A	N/A	N/A	N/A
PHROG	UHGV-0260338_4	phrog_87	77.0	1.9e-22	metallo-protease	other
UniRef90	UHGV-0260338_4	UniRef90_UPI001D07A9BA	227.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0260338_4	1256908.HMPREF0373_00642	209.0	0	Zn peptidase	N/A
COG	UHGV-0260338_4	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0260338_4	PF06114,COG2856	N/A	N/A	N/A	N/A
UniRef90	UHGV-0260338_5	UniRef90_UPI001571211F	199.0	0	N/A	N/A
eggNOG-mapper	UHGV-0260338_5	657322.FPR_11180	145.0	2.10195e-44	N/A	N/A
Pfam	UHGV-0260338_5	PF13711	N/A	N/A	N/A	DUF4160
eggNOG-mapper	UHGV-0260338_6	1410624.JNKK01000069_gene1367	145.0	2.94273e-44	N/A	N/A
KOfam	UHGV-0260338_7	K22300	68.8	1e-19	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0260338_7	phrog_8	78.3	1.4e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0260338_7	UniRef90_UPI0015701830	282.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0260338_7	1415775.U729_2578	96.7	1.75e-23	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0260338_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0260338_7	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0260338_7	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0260338_8	UniRef90_UPI00156EC6B6	135.0	3.01999e-40	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0260338_8	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0260338_8	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0260338_11	1396141.BATP01000060_gene4572	68.2	0.000000000122	N/A	N/A
structural_annotation	UHGV-0260338_11	PF04450,COG3975	N/A	N/A	N/A	N/A
UniRef90	UHGV-0260338_14	UniRef90_UPI0015705952	127.0	6.86e-37	toxin HipA	N/A
eggNOG-mapper	UHGV-0260338_14	478749.BRYFOR_05417	63.9	0.0000000000017	N/A	N/A
PHROG	UHGV-0260338_17	phrog_434	328.7	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0260338_17	UniRef90_A0A415L5E5	567.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-0260338_17	97139.C824_05807	366.0	0	YqaJ-like viral recombinase domain	N/A
Pfam	UHGV-0260338_17	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0260338_17	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0260338_17	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0260338_17	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-0260338_18	K07455	284.6	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0260338_18	phrog_148	279.6	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0260338_18	UniRef90_A0A415L5D0	497.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-0260338_18	658088.HMPREF0987_00529	363.0	0	RecT family	N/A
Pfam	UHGV-0260338_18	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0260338_18	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0260338_18	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0260338_18	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0260338_19	phrog_244	47.8	0.0000000000003	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0260338_19	33035.JPJF01000122_gene2460	129.0	1.06e-37	N/A	N/A
PHROG	UHGV-0260338_20	phrog_10469	105.4	2.2e-32	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0260338_20	UniRef90_A0A174WT25	263.0	0	Replication initiator A domain-containing protein	N/A
eggNOG-mapper	UHGV-0260338_20	97138.C820_00775	176.0	0	DnaD domain protein	N/A
COG	UHGV-0260338_20	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0260338_20	PF10771,MF_01177,TIGR01714,COG0640	N/A	N/A	N/A	N/A
KOfam	UHGV-0260338_21	K02315	136.8	1.90001e-40	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0260338_21	phrog_50	133.4	2e-39	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0260338_21	UniRef90_UPI001D06D025	537.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0260338_21	397291.C804_01604	239.0	0	Bacterial dnaA protein	N/A
Pfam	UHGV-0260338_21	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0260338_21	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0260338_21	PF01695,MF_00377,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0260338_23	phrog_17690	140.5	4.60046e-42	N/A	unknown function
eggNOG-mapper	UHGV-0260338_23	476272.RUMHYD_03925	204.0	0	N/A	N/A
PHROG	UHGV-0260338_24	phrog_424	87.0	2.2e-25	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0260338_24	UniRef90_A0A2H4JC51	558.0	0	Putative 3'-phosphoadenosine 5'-phosphosulfatesulfotransferase/FAD synthetase-related enzyme	N/A
eggNOG-mapper	UHGV-0260338_24	411461.DORFOR_01142	607.0	0	N/A	N/A
COG	UHGV-0260338_24	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0260338_24	PF01507,MF_00064,TIGR00434,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0260338_25	phrog_8446	52.6	0.0000000000000095	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0260338_25	UniRef90_UPI001D06557F	243.0	0	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0260338_25	PF13936	N/A	N/A	Helix-turn-helix domain	HTH_38
Pfam	UHGV-0260338_25	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-0260338_25	PF01710,NF040595	N/A	N/A	N/A	N/A
PHROG	UHGV-0260338_26	phrog_19011	152.4	0	N/A	unknown function
structural_annotation	UHGV-0260338_26	PF18359,COG4466	N/A	N/A	N/A	N/A
PHROG	UHGV-0260338_27	phrog_36	66.2	5.4e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0260338_27	UniRef90_UPI001D089637	160.0	0	N/A	N/A
eggNOG-mapper	UHGV-0260338_27	1304866.K413DRAFT_3028	178.0	0	N/A	N/A
structural_annotation	UHGV-0260338_27	PF04545,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0260338_28	1235802.C823_04588	194.0	0	N/A	N/A
PHROG	UHGV-0260338_29	phrog_509	298.8	0	terminase small subunit	head and packaging
UniRef90	UHGV-0260338_29	UniRef90_UPI001D07E0EA	502.0	0	phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0260338_29	1120998.AUFC01000030_gene2230	240.0	0	DNA packaging	N/A
Pfam	UHGV-0260338_29	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
NCBIFam	UHGV-0260338_29	NF040601.1	N/A	N/A	phage terminase small subunit	N/A
COG	UHGV-0260338_29	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0260338_29	NF040601,COG5484	N/A	N/A	N/A	N/A
KOfam	UHGV-0260338_30	K06909	162.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0260338_30	phrog_10250	98.8	2.7e-29	N/A	unknown function
UniRef90	UHGV-0260338_30	UniRef90_UPI0018985A97	733.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0260338_30	411461.DORFOR_00750	630.0	0	COG COG1783 Phage terminase large subunit	N/A
Pfam	UHGV-0260338_30	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0260338_30	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0260338_30	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0260338_31	phrog_533	404.0	0	portal protein	head and packaging
UniRef90	UHGV-0260338_31	UniRef90_UPI001D0867C2	939.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0260338_31	411461.DORFOR_00749	653.0	0	COG NOG25118 non supervised orthologous group	N/A
Pfam	UHGV-0260338_31	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0260338_31	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0260338_32	phrog_581	307.1	0	minor head protein	head and packaging
UniRef90	UHGV-0260338_32	UniRef90_UPI00156EEEC1	940.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0260338_32	658655.HMPREF0988_02563	345.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0260338_32	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0260338_32	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0260338_32	PF06152,PF12636	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0260338_33	411460.RUMTOR_01296	82.8	1.49e-20	N/A	N/A
KOfam	UHGV-0260338_35	K07584	64.5	2.1e-18	N/A	N/A
PHROG	UHGV-0260338_35	phrog_4478	77.3	1.4e-22	peptidase	other
UniRef90	UHGV-0260338_35	UniRef90_UPI00156D7F8B	168.0	0	ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0260338_35	411461.DORFOR_00746	112.0	1.96e-31	Pfam:Peptidase_C108	N/A
Pfam	UHGV-0260338_35	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0260338_35	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0260338_35	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0260338_36	phrog_2303	111.2	1.1e-32	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0260338_36	411462.DORLON_00787	178.0	0	N/A	N/A
structural_annotation	UHGV-0260338_36	PF10788,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-0260338_37	phrog_10	183.0	0	major head protein	head and packaging
UniRef90	UHGV-0260338_37	UniRef90_UPI00157128C8	645.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0260338_37	411461.DORFOR_00744	550.0	0	COG NOG20168 non supervised orthologous group	N/A
Pfam	UHGV-0260338_37	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0260338_37	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0260338_37	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0260338_37	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0260338_38	phrog_541	94.8	6.7e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-0260338_38	641112.ACOK01000073_gene2896	58.9	0.00000000319	N/A	N/A
PHROG	UHGV-0260338_39	phrog_3366	119.4	2e-35	N/A	unknown function
eggNOG-mapper	UHGV-0260338_39	1120746.CCNL01000014_gene2099	57.8	0.00000000887	N/A	N/A
Pfam	UHGV-0260338_39	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0260338_39	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0260338_40	phrog_556	66.6	3.3e-19	minor head protein	head and packaging
UniRef90	UHGV-0260338_40	UniRef90_UPI00156EFCF3	284.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0260338_40	411461.DORFOR_01170	86.3	1.3e-19	Minor capsid protein	N/A
Pfam	UHGV-0260338_40	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0260338_40	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0260338_41	phrog_3266	118.7	2.9e-35	tail completion	connector
UniRef90	UHGV-0260338_41	UniRef90_UPI001C86C58C	58.2	0.0000000644	chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0260338_41	663278.Ethha_0098	54.3	0.000000299	N/A	N/A
structural_annotation	UHGV-0260338_41	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0260338_42	phrog_3099	136.6	1.3e-40	N/A	unknown function
eggNOG-mapper	UHGV-0260338_42	476272.RUMHYD_01782	236.0	0	N/A	N/A
structural_annotation	UHGV-0260338_42	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0260338_43	phrog_11299	151.8	2.8026e-45	N/A	unknown function
eggNOG-mapper	UHGV-0260338_43	33035.JPJF01000106_gene3125	104.0	1.04e-26	N/A	N/A
structural_annotation	UHGV-0260338_43	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0260338_44	phrog_706	150.0	1.26117e-44	N/A	unknown function
UniRef90	UHGV-0260338_44	UniRef90_UPI00156F1927	374.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0260338_44	476272.RUMHYD_01784	205.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0260338_44	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0260338_44	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0260338_45	phrog_1535	679.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0260338_45	UniRef90_A0A174LLY7	728.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0260338_45	411459.RUMOBE_01384	521.0	0	phage tail tape measure protein	N/A
COG	UHGV-0260338_45	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0260338_46	phrog_1194	80.5	1.7e-23	N/A	unknown function
structural_annotation	UHGV-0260338_46	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0260338_47	phrog_6616	698.2	0	tail protein	tail
UniRef90	UHGV-0260338_47	UniRef90_UPI00156E2BA6	2351.0	0	collagen-like protein	N/A
eggNOG-mapper	UHGV-0260338_47	428127.EUBDOL_01565	176.0	1.27995e-41	cellulase activity	N/A
Pfam	UHGV-0260338_47	PF21470	N/A	N/A	Minor structural protein 5-like, C-terminal domain	BppU-like_C
COG	UHGV-0260338_47	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0260338_47	PF05113,PF18957,PF16407,NF033848,NF011782,COG4379	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0260338_48	742733.HMPREF9469_00973	170.0	4.2039e-45	N/A	N/A
UniRef90	UHGV-0260338_49	UniRef90_A0A564VXL8	1041.0	0	Bacterial Ig-like domain (Group 2)	N/A
structural_annotation	UHGV-0260338_49	PF01301,PF03944,MF_00279,NF040743,COG3622	N/A	N/A	N/A	N/A
PHROG	UHGV-0260338_50	phrog_4105	86.0	3.4e-25	N/A	unknown function
eggNOG-mapper	UHGV-0260338_50	411459.RUMOBE_00911	176.0	0	N/A	N/A
PHROG	UHGV-0260338_51	phrog_1129	87.5	7.9e-26	holin	lysis
UniRef90	UHGV-0260338_51	UniRef90_UPI00051B7422	149.0	5.60519e-45	phage holin family protein	N/A
eggNOG-mapper	UHGV-0260338_51	1121115.AXVN01000006_gene2171	159.0	0	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0260338_51	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0260338_51	PF16079	N/A	N/A	N/A	N/A
KOfam	UHGV-0260338_52	K07273	190.6	0	acm; lysozyme	N/A
PHROG	UHGV-0260338_52	phrog_6745	191.0	0	endolysin	lysis
UniRef90	UHGV-0260338_52	UniRef90_A0A1C5L8B5	774.0	0	Lysozyme M1	N/A
eggNOG-mapper	UHGV-0260338_52	1121115.AXVN01000006_gene2170	436.0	0	autolytic lysozime (1,4-beta-N-acetylmuramidase), family 25 of glycosyl hydrolases	N/A
Pfam	UHGV-0260338_52	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0260338_52	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0260338_52	PF01183,PF18342,PF14603,NF040678,TIGR04303,COG3757,COG3807	N/A	N/A	N/A	N/A
KOfam	UHGV-0260338_53	K14059	153.4	2.8026e-45	int; integrase	N/A
PHROG	UHGV-0260338_53	phrog_1	130.3	1.9e-38	integrase	integration and excision
UniRef90	UHGV-0260338_53	UniRef90_UPI001D062E7A	528.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0260338_53	1304866.K413DRAFT_1180	323.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0260338_53	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0260338_53	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0260338_53	PF00589,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A