UHGV-0264671 (vOTU-049787)

Viral Genome: UHGV-0264671

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0264671
vOTU ID	vOTU-049787
Representative Genome?	Yes
Source	mMGE
Original Genome ID	ERR2855910_141_86406_round1256~3259634
Associated Biosample	SAMD00164833
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	21
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9782
Viral Hallmark Genes (geNomad)	11
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	44.19
Jumbo Phage?	No

Genome Content
Length (bps)	38,344
GC Content	40.42%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	53
CDS Density	94%
Average CDS Length (bps)	681.45
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0264671_1	phrog_21033	198.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0264671_1	411462.DORLON_00790	237.0	0	N/A	N/A
COG	UHGV-0264671_1	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0264671_2	phrog_3711	91.5	4.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-0264671_2	411462.DORLON_00789	136.0	6.26002e-41	N/A	N/A
PHROG	UHGV-0264671_3	phrog_194	106.0	4e-31	head scaffolding protein	head and packaging
UniRef90	UHGV-0264671_3	UniRef90_A0A1C5W5U5	316.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0264671_3	742765.HMPREF9457_02126	306.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0264671_3	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0264671_3	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0264671_4	phrog_422	209.2	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0264671_4	411470.RUMGNA_02219	462.0	0	N/A	N/A
structural_annotation	UHGV-0264671_4	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0264671_5	phrog_541	77.2	1.9e-22	head-tail adaptor	connector
UniRef90	UHGV-0264671_5	UniRef90_C4IFE6	57.0	0.0000000784	Putative gp8	N/A
eggNOG-mapper	UHGV-0264671_5	632245.CLP_1650	57.0	0.0000000131	N/A	N/A
PHROG	UHGV-0264671_6	phrog_3366	148.4	2.38221e-44	N/A	unknown function
eggNOG-mapper	UHGV-0264671_6	411462.DORLON_00784	259.0	0	N/A	N/A
Pfam	UHGV-0264671_6	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0264671_6	PF20536,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0264671_7	phrog_556	143.5	5.19882e-43	minor head protein	head and packaging
UniRef90	UHGV-0264671_7	UniRef90_UPI00093128B4	151.0	4.2039e-45	minor capsid protein	N/A
eggNOG-mapper	UHGV-0264671_7	411462.DORLON_00783	160.0	0	N/A	N/A
structural_annotation	UHGV-0264671_7	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0264671_8	phrog_3266	148.9	1.4013e-44	tail completion	connector
eggNOG-mapper	UHGV-0264671_8	658655.HMPREF0988_02556	166.0	0	N/A	N/A
structural_annotation	UHGV-0264671_8	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0264671_9	phrog_3099	149.1	1.96182e-44	N/A	unknown function
eggNOG-mapper	UHGV-0264671_9	411468.CLOSCI_02404	190.0	0	N/A	N/A
structural_annotation	UHGV-0264671_9	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0264671_10	phrog_4450	103.8	1.2e-30	N/A	unknown function
UniRef90	UHGV-0264671_10	UniRef90_UPI001C0AC01D	59.7	0.00000000507	AP endonuclease	N/A
eggNOG-mapper	UHGV-0264671_10	1235792.C808_05374	108.0	9.22e-29	N/A	N/A
Pfam	UHGV-0264671_10	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-0264671_10	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0264671_11	phrog_706	151.0	5.60519e-45	N/A	unknown function
UniRef90	UHGV-0264671_11	UniRef90_UPI0018AAC0D2	280.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0264671_11	1235792.C808_05375	150.0	4.80645e-43	COG NOG24969 non supervised orthologous group	N/A
Pfam	UHGV-0264671_11	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0264671_11	PF06854	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0264671_12	1235792.C808_05376	68.2	0.0000000000000083	N/A	N/A
structural_annotation	UHGV-0264671_12	PF10122,COG4416	N/A	N/A	N/A	N/A
PHROG	UHGV-0264671_13	phrog_19074	488.4	0	N/A	unknown function
UniRef90	UHGV-0264671_13	UniRef90_A0A414S2X0	1056.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0264671_13	1235792.C808_05377	545.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0264671_13	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0264671_13	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0264671_13	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0264671_13	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0264671_14	phrog_33	74.4	2.5e-21	distal tail protein Dit	tail
UniRef90	UHGV-0264671_14	UniRef90_A0A414S2W8	479.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0264671_14	1235798.C817_02569	162.0	0	tail component	N/A
Pfam	UHGV-0264671_14	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-0264671_14	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0264671_14	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0264671_15	phrog_1067	349.3	0	minor head protein	head and packaging
UniRef90	UHGV-0264671_15	UniRef90_R9MV22	675.0	0	Phage minor structural protein	N/A
eggNOG-mapper	UHGV-0264671_15	1235798.C817_04594	675.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0264671_15	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0264671_15	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0264671_15	COG4926	N/A	N/A	Phage-related protein	N/A
eggNOG-mapper	UHGV-0264671_17	349123.Lreu23DRAFT_3172	61.2	0.00000141	N/A	N/A
UniRef90	UHGV-0264671_20	UniRef90_A0A414S363	410.0	0	N/A	N/A
eggNOG-mapper	UHGV-0264671_20	1211817.CCAT010000008_gene929	179.0	0	N/A	N/A
structural_annotation	UHGV-0264671_20	PF10899	N/A	N/A	N/A	N/A
PHROG	UHGV-0264671_21	phrog_1863	53.1	2.6e-16	N/A	unknown function
eggNOG-mapper	UHGV-0264671_21	1226322.HMPREF1545_04027	67.8	0.0000000000000508	N/A	N/A
PHROG	UHGV-0264671_22	phrog_443	46.9	0.0000000000007	holin	lysis
UniRef90	UHGV-0264671_22	UniRef90_UPI001F16E4E6	110.0	1.28e-30	holin	N/A
eggNOG-mapper	UHGV-0264671_22	411462.DORLON_00825	107.0	3.67e-30	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0264671_22	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0264671_22	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-0264671_24	K01448	108.0	9.4e-32	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0264671_24	phrog_435	177.8	0	endolysin	lysis
UniRef90	UHGV-0264671_24	UniRef90_A0A174JR12	519.0	0	N-acetylmuramoyl-L-alanine amidase LytC	N/A
eggNOG-mapper	UHGV-0264671_24	411461.DORFOR_01187	160.0	1.4013e-44	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0264671_24	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0264671_24	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0264671_24	PF01520,PF18342,MF_00417,TIGR02883,COG0860,COG4991	N/A	N/A	N/A	N/A
KOfam	UHGV-0264671_25	K06400	376.7	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0264671_25	phrog_95	386.1	0	integrase	integration and excision
UniRef90	UHGV-0264671_25	UniRef90_A0A414S2T5	983.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0264671_25	411462.DORLON_00823	755.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0264671_25	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0264671_25	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0264671_25	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0264671_25	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0264671_25	PF00239,PF07508,PF13408,NF041201,COG1961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0264671_26	742740.HMPREF9474_00280	54.3	0.00000198	N/A	N/A
structural_annotation	UHGV-0264671_26	MF_00867	N/A	N/A	N/A	N/A
KOfam	UHGV-0264671_27	K07504	434.5	0	K07504; predicted type IV restriction endonuclease	N/A
PHROG	UHGV-0264671_27	phrog_4225	493.3	0	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0264671_27	UniRef90_A0A173VG58	681.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-0264671_27	411462.DORLON_00821	676.0	0	Type I restriction enzyme R protein N terminus (HSDR_N)	N/A
Pfam	UHGV-0264671_27	PF04313	N/A	N/A	Type I restriction enzyme R protein N terminus (HSDR_N)	HSDR_N
COG	UHGV-0264671_27	COG4748	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0264671_27	PF13588,TIGR04256,COG4748	N/A	N/A	N/A	N/A
PHROG	UHGV-0264671_28	phrog_20886	140.3	1.3999e-42	N/A	unknown function
UniRef90	UHGV-0264671_28	UniRef90_UPI000C757FC8	87.8	2.23e-20	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0264671_28	411462.DORLON_00820	248.0	0	N/A	N/A
structural_annotation	UHGV-0264671_28	PF06114	N/A	N/A	N/A	N/A
KOfam	UHGV-0264671_29	K22299	42.1	0.000000000016	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0264671_29	phrog_8	69.9	4.9e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0264671_29	UniRef90_A6BEU9	248.0	0	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0264671_29	411462.DORLON_00819	248.0	0	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0264671_29	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0264671_29	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0264671_29	PF12844,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0264671_30	phrog_8	45.6	0.0000000000015	transcriptional regulator	transcription regulation
UniRef90	UHGV-0264671_30	UniRef90_A0A414S2U7	149.0	2.8026e-45	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0264671_30	12417.Q9T1J3_9CAUD	55.5	0.00000000569	sequence-specific DNA binding	N/A
Pfam	UHGV-0264671_30	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0264671_30	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0264671_31	PF12729	N/A	N/A	N/A	N/A
PHROG	UHGV-0264671_32	phrog_32168	110.2	7.3e-33	N/A	unknown function
structural_annotation	UHGV-0264671_32	PF13248,MF_00788,NF041910,COG1552	N/A	N/A	N/A	N/A
KOfam	UHGV-0264671_36	K03546	54.0	0.0000000000000018	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-0264671_36	phrog_1499	508.5	0	N/A	unknown function
UniRef90	UHGV-0264671_36	UniRef90_A0A414S2U1	836.0	0	Chromosome segregation protein SMC	N/A
eggNOG-mapper	UHGV-0264671_36	411462.DORLON_00812	793.0	0	AAA ATPase domain	N/A
Pfam	UHGV-0264671_36	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0264671_36	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0264671_36	PF11398,MF_00365,TIGR00634,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-0264671_37	phrog_124	259.4	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0264671_37	UniRef90_UPI001E57C8F5	525.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0264671_37	411462.DORLON_00811	765.0	0	AAA domain	N/A
Pfam	UHGV-0264671_37	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0264671_37	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0264671_38	phrog_2698	172.3	0	N/A	unknown function
UniRef90	UHGV-0264671_38	UniRef90_D9R8Z5	184.0	0	N/A	N/A
eggNOG-mapper	UHGV-0264671_38	411462.DORLON_00810	291.0	0	N/A	N/A
structural_annotation	UHGV-0264671_38	PF05037	N/A	N/A	N/A	N/A
KOfam	UHGV-0264671_39	K17677	341.7	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-0264671_39	phrog_16	280.9	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0264671_39	UniRef90_R6SHV8	1029.0	0	Helicase C-terminal domain protein	N/A
eggNOG-mapper	UHGV-0264671_39	411462.DORLON_00809	1054.0	0	helicase superfamily c-terminal domain	N/A
PADLOC	UHGV-0264671_39	mREase_IV_00005	126.8	2.1e-37	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0264671_39	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0264671_39	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0264671_39	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0264671_39	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
KOfam	UHGV-0264671_40	K07505	406.1	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-0264671_40	phrog_2597	1224.8	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0264671_40	UniRef90_A6BET8	1557.0	0	Primase C terminal 2 (PriCT-2)	N/A
eggNOG-mapper	UHGV-0264671_40	411462.DORLON_00808	1557.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-0264671_40	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-0264671_40	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-0264671_40	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-0264671_40	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-0264671_41	K01160	47.3	0.00000000000054	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0264671_41	phrog_140	88.7	7.2e-26	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0264671_41	UniRef90_A0A173ZCZ5	265.0	0	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-0264671_41	411462.DORLON_00806	245.0	0	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0264671_41	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0264671_41	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0264671_41	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0264671_42	411462.DORLON_00805	125.0	4.43e-37	N/A	N/A
PHROG	UHGV-0264671_43	phrog_15198	41.9	0.000000000015	N/A	unknown function
UniRef90	UHGV-0264671_43	UniRef90_A0A414S2X3	244.0	0	N/A	N/A
eggNOG-mapper	UHGV-0264671_43	411462.DORLON_00804	182.0	0	N/A	N/A
Pfam	UHGV-0264671_43	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0264671_43	PF04448,NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0264671_44	phrog_15198	50.6	5.5e-16	N/A	unknown function
UniRef90	UHGV-0264671_44	UniRef90_A0A414S348	253.0	0	N/A	N/A
eggNOG-mapper	UHGV-0264671_44	1256908.HMPREF0373_00667	102.0	2.21e-26	N/A	N/A
Pfam	UHGV-0264671_44	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0264671_48	phrog_36	49.0	0.00000000000013	transcriptional regulator	transcription regulation
UniRef90	UHGV-0264671_48	UniRef90_A0A414S361	271.0	0	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-0264671_48	1232452.BAIB02000007_gene1634	160.0	0	N/A	N/A
structural_annotation	UHGV-0264671_48	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-0264671_50	phrog_2412	142.1	2.29953e-42	N/A	unknown function
UniRef90	UHGV-0264671_50	UniRef90_UPI001E414EFE	160.0	0	KGG domain-containing protein	N/A
eggNOG-mapper	UHGV-0264671_50	742723.HMPREF9477_00912	199.0	0	N/A	N/A
KOfam	UHGV-0264671_51	K06909	96.0	4.8e-28	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0264671_51	phrog_2	96.5	4.8e-28	terminase large subunit	head and packaging
UniRef90	UHGV-0264671_51	UniRef90_A0A173ZBW3	888.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0264671_51	742765.HMPREF9457_02119	861.0	0	Terminase-like family	N/A
Pfam	UHGV-0264671_51	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0264671_51	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0264671_51	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0264671_51	PF04466,PF20441,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0264671_52	phrog_533	331.4	0	portal protein	head and packaging
UniRef90	UHGV-0264671_52	UniRef90_A0A174JNH8	878.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0264671_52	742765.HMPREF9457_02120	783.0	0	N/A	N/A
structural_annotation	UHGV-0264671_52	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0264671_53	phrog_581	326.6	0	minor head protein	head and packaging
UniRef90	UHGV-0264671_53	UniRef90_A0A173VG74	825.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0264671_53	742765.HMPREF9457_02121	756.0	0	N/A	N/A
Pfam	UHGV-0264671_53	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0264671_53	COG2369	N/A	N/A	N/A	N/A