UHGV-0278109 (vOTU-071771)

Viral Genome: UHGV-0278109

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0278109
vOTU ID	vOTU-071771
Representative Genome?	Yes
Source	mMGE
Original Genome ID	SRR10479032_141_37126_round1256~1801242
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	99.9 (High-quality)
Trimmed?	No
CheckV Viral Markers	18
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9821
Viral Hallmark Genes (geNomad)	8
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	46.21
Jumbo Phage?	No

Genome Content
Length (bps)	45,976
GC Content	40.70%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	65
CDS Density	89%
Average CDS Length (bps)	630.97
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0278109_1	phrog_3490	78.4	9.8e-23	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0278109_1	UniRef90_UPI001D0995BC	65.5	0.0000000000329	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0278109_1	1298920.KI911353_gene2715	82.0	1.03e-17	N/A	N/A
PHROG	UHGV-0278109_2	phrog_314	82.0	3.8e-24	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0278109_2	UniRef90_A0A8D9UHJ5	87.4	2.44e-16	Intron associated endonuclease	N/A
eggNOG-mapper	UHGV-0278109_2	1399942.U3PCR9_9CAUD	86.7	2.17e-17	NUMOD3 motif (2 copies)	N/A
Pfam	UHGV-0278109_2	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
Pfam	UHGV-0278109_2	PF07460	N/A	N/A	NUMOD3 motif	NUMOD3
NCBIFam	UHGV-0278109_2	TIGR01453.1	N/A	N/A	group I intron endonuclease	N/A
structural_annotation	UHGV-0278109_2	PF19835,PF07453,TIGR01453,COG2827	N/A	N/A	N/A	N/A
PHROG	UHGV-0278109_3	phrog_18107	259.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0278109_3	397290.C810_05167	242.0	0	N/A	N/A
structural_annotation	UHGV-0278109_3	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0278109_4	phrog_2872	172.3	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0278109_4	UniRef90_UPI0015715A02	280.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0278109_4	1256908.HMPREF0373_00658	248.0	0	AAA domain	N/A
structural_annotation	UHGV-0278109_4	TIGR01618	N/A	N/A	N/A	N/A
UniRef90	UHGV-0278109_5	UniRef90_R6RDX0	77.0	3.04e-17	Arginyl-tRNA synthetase	N/A
structural_annotation	UHGV-0278109_6	NF011879	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-0278109_10	cluster_17974	58.9	0.00000000000000269	NA	N/A
PHROG	UHGV-0278109_11	phrog_6058	54.8	0.000000000000001	N/A	unknown function
UniRef90	UHGV-0278109_11	UniRef90_A0A2V1JQ38	63.9	0.0000000000317	Glycogen synthase	N/A
eggNOG-mapper	UHGV-0278109_11	742733.HMPREF9469_05094	62.0	0.0000000000302	N/A	N/A
UniRef90	UHGV-0278109_13	UniRef90_A0A373NQX7	138.0	1.67007e-41	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0278109_13	1163671.JAGI01000002_gene3923	87.0	7.36e-22	N/A	N/A
structural_annotation	UHGV-0278109_13	PF05339,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0278109_14	K22299	65.0	1.8e-18	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0278109_14	phrog_8	70.8	3e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0278109_14	UniRef90_UPI000E51662C	229.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0278109_14	1140001.I571_01121	96.3	4.26e-23	Peptidase S24-like	N/A
Pfam	UHGV-0278109_14	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0278109_14	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0278109_14	PF13560,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0278109_16	phrog_8545	65.1	1.2e-18	superinfection exclusion Sie-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0278109_16	UniRef90_UPI001C0EAFDF	221.0	0	OB-fold putative lipoprotein	N/A
eggNOG-mapper	UHGV-0278109_16	1304866.K413DRAFT_0836	160.0	0	tRNA_anti-like	N/A
Pfam	UHGV-0278109_16	PF12869	N/A	N/A	tRNA_anti-like	tRNA_anti-like
structural_annotation	UHGV-0278109_16	PF12869,PF10571,MF_01959,TIGR03943,COG5235	N/A	N/A	N/A	N/A
KOfam	UHGV-0278109_17	K14059	98.7	8.8e-29	int; integrase	N/A
PHROG	UHGV-0278109_17	phrog_1	126.3	3.3e-37	integrase	integration and excision
UniRef90	UHGV-0278109_17	UniRef90_A0A6L8SXX0	790.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0278109_17	1235792.C808_05256	352.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0278109_17	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0278109_17	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0278109_17	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0278109_18	K07273	201.8	0	acm; lysozyme	N/A
PHROG	UHGV-0278109_18	phrog_6745	183.3	0	endolysin	lysis
UniRef90	UHGV-0278109_18	UniRef90_A0A6L8SXR6	908.0	0	CHAP domain-containing protein	N/A
eggNOG-mapper	UHGV-0278109_18	457412.RSAG_00790	668.0	0	CHAP domain	N/A
Pfam	UHGV-0278109_18	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0278109_18	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0278109_18	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0278109_18	PF01183,TIGR02594,TIGR04303,COG3757,COG3942	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0278109_19	NF040910	N/A	N/A	N/A	N/A
KOfam	UHGV-0278109_21	K08131	97.8	4.5e-29	COL9A; collagen type IX alpha	N/A
PHROG	UHGV-0278109_21	phrog_819	132.1	1.99993e-41	tail protein	tail
UniRef90	UHGV-0278109_21	UniRef90_A0A3A6GQL7	1190.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-0278109_21	1508644.SFBmNL_00815	97.4	5.91e-18	N/A	N/A
Pfam	UHGV-0278109_21	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
Pfam	UHGV-0278109_21	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0278109_21	PF19789,PF16323,COG2033	N/A	N/A	N/A	N/A
PHROG	UHGV-0278109_22	phrog_18444	76.3	2.7e-22	N/A	unknown function
PHROG	UHGV-0278109_23	phrog_6616	540.5	0	tail protein	tail
UniRef90	UHGV-0278109_23	UniRef90_A0A352BLY8	523.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0278109_23	33035.JPJF01000043_gene1002	232.0	0	N/A	N/A
structural_annotation	UHGV-0278109_23	PF05113,PF18432,NF033848,NF011735,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0278109_24	phrog_1194	85.1	6.1e-25	N/A	unknown function
structural_annotation	UHGV-0278109_24	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0278109_25	phrog_1535	478.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0278109_25	UniRef90_A0A173R880	836.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0278109_25	476272.RUMHYD_01785	833.0	0	phage tail tape measure protein	N/A
COG	UHGV-0278109_25	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0278109_25	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0278109_26	phrog_706	131.8	5e-39	N/A	unknown function
UniRef90	UHGV-0278109_26	UniRef90_UPI001BAD00AD	207.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0278109_26	411459.RUMOBE_01383	349.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0278109_26	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0278109_26	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0278109_27	phrog_11299	67.8	1.9e-19	N/A	unknown function
eggNOG-mapper	UHGV-0278109_27	411459.RUMOBE_01382	59.3	0.00000000298	N/A	N/A
structural_annotation	UHGV-0278109_27	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0278109_28	phrog_3099	132.6	2.6e-39	N/A	unknown function
eggNOG-mapper	UHGV-0278109_28	411902.CLOBOL_00129	171.0	0	N/A	N/A
structural_annotation	UHGV-0278109_28	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0278109_29	phrog_3266	91.6	6.9e-27	tail completion	connector
eggNOG-mapper	UHGV-0278109_29	476272.RUMHYD_01781	150.0	4.48416e-44	N/A	N/A
structural_annotation	UHGV-0278109_29	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0278109_30	phrog_556	64.2	1.6e-18	minor head protein	head and packaging
UniRef90	UHGV-0278109_30	UniRef90_UPI000E4989EB	298.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0278109_30	476272.RUMHYD_01780	160.0	0	N/A	N/A
Pfam	UHGV-0278109_30	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0278109_30	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0278109_31	phrog_3366	89.6	3.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-0278109_31	476272.RUMHYD_01779	154.0	0	N/A	N/A
structural_annotation	UHGV-0278109_31	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0278109_32	phrog_1129	75.9	3.7e-22	holin	lysis
UniRef90	UHGV-0278109_32	UniRef90_A0A395X7B2	174.0	0	Enolase	N/A
eggNOG-mapper	UHGV-0278109_32	411461.DORFOR_00721	112.0	1.51e-31	N/A	N/A
Pfam	UHGV-0278109_32	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0278109_32	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0278109_34	phrog_541	95.8	2.6e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-0278109_34	476272.RUMHYD_01778	107.0	1.6e-27	N/A	N/A
PHROG	UHGV-0278109_35	phrog_544	163.1	0	major head protein	head and packaging
UniRef90	UHGV-0278109_35	UniRef90_A0A395X7A1	662.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0278109_35	1232453.BAIF02000011_gene3359	387.0	0	N/A	N/A
Pfam	UHGV-0278109_35	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0278109_35	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0278109_36	phrog_194	64.3	2.6e-18	head scaffolding protein	head and packaging
UniRef90	UHGV-0278109_36	UniRef90_UPI001D14C9C8	192.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0278109_36	476272.RUMHYD_01775	197.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0278109_36	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0278109_37	phrog_28802	224.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0278109_37	476272.RUMHYD_01772	199.0	0	N/A	N/A
PHROG	UHGV-0278109_38	phrog_20016	205.7	0	N/A	unknown function
UniRef90	UHGV-0278109_38	UniRef90_A0A285PT46	167.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0278109_38	397290.C810_05214	187.0	0	N/A	N/A
structural_annotation	UHGV-0278109_38	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0278109_39	phrog_16490	193.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0278109_39	397290.C810_01328	180.0	0	N/A	N/A
PHROG	UHGV-0278109_40	phrog_22984	96.0	2.4e-28	N/A	unknown function
PHROG	UHGV-0278109_41	phrog_21718	133.2	1.2e-39	N/A	unknown function
eggNOG-mapper	UHGV-0278109_41	476272.RUMHYD_01768	130.0	7.97e-37	N/A	N/A
UniRef90	UHGV-0278109_42	UniRef90_A0A395X7A4	178.0	0	CTP synthase	N/A
eggNOG-mapper	UHGV-0278109_42	476272.RUMHYD_01766	120.0	3.06e-34	N/A	N/A
PHROG	UHGV-0278109_43	phrog_3754	112.9	2.2e-33	N/A	unknown function
eggNOG-mapper	UHGV-0278109_43	476272.RUMHYD_01764	171.0	0	N/A	N/A
PHROG	UHGV-0278109_44	phrog_581	272.3	0	minor head protein	head and packaging
UniRef90	UHGV-0278109_44	UniRef90_A0A395X791	754.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0278109_44	476272.RUMHYD_01761	423.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0278109_44	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0278109_44	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0278109_44	PF06152	N/A	N/A	N/A	N/A
KOfam	UHGV-0278109_45	K00640	51.1	0.000000000000023	cysE; serine O-acetyltransferase [EC:2.3.1.30]	N/A
PHROG	UHGV-0278109_45	phrog_2154	50.8	0.000000000000023	N/A	unknown function
UniRef90	UHGV-0278109_45	UniRef90_A0A4Q0M8Z2	211.0	0	Serine acetyltransferase	N/A
eggNOG-mapper	UHGV-0278109_45	143224.JQMD01000002_gene3419	125.0	1.85e-33	Bacterial transferase hexapeptide (six repeats)	N/A
COG	UHGV-0278109_45	COG1045	N/A	N/A	Serine acetyltransferase	N/A
PHROG	UHGV-0278109_47	phrog_533	287.6	0	portal protein	head and packaging
UniRef90	UHGV-0278109_47	UniRef90_A0A1C6CDM8	706.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0278109_47	33035.JPJF01000106_gene3135	543.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0278109_47	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0278109_48	K06909	385.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0278109_48	phrog_3717	149.1	2.10195e-44	terminase large subunit	head and packaging
UniRef90	UHGV-0278109_48	UniRef90_A0A6L8SYJ6	1042.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0278109_48	33035.JPJF01000106_gene3136	530.0	0	Terminase small subunit	N/A
Pfam	UHGV-0278109_48	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0278109_48	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0278109_48	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0278109_48	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0278109_48	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0278109_50	1235793.C809_02210	106.0	1.27e-27	N/A	N/A
structural_annotation	UHGV-0278109_50	PF09038	N/A	N/A	N/A	N/A
PHROG	UHGV-0278109_57	phrog_424	62.9	6.4e-18	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0278109_57	UniRef90_A0A373DE70	277.0	0	Phosphoadenosine phosphosulfate reductase	N/A
eggNOG-mapper	UHGV-0278109_57	1304866.K413DRAFT_1205	268.0	0	sulfate reduction	N/A
COG	UHGV-0278109_57	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
PHROG	UHGV-0278109_58	phrog_17690	131.5	2.9e-39	N/A	unknown function
eggNOG-mapper	UHGV-0278109_58	476272.RUMHYD_03925	167.0	0	N/A	N/A
UniRef90	UHGV-0278109_60	UniRef90_A0A6L8SWV5	170.0	0	Winged helix-turn-helix transcriptional regulator	N/A
structural_annotation	UHGV-0278109_60	PF01726,COG0640	N/A	N/A	N/A	N/A
KOfam	UHGV-0278109_62	K15255	247.9	0	PIF1; ATP-dependent DNA helicase PIF1 [EC:5.6.2.3]	N/A
PHROG	UHGV-0278109_62	phrog_325	265.7	0	Dda-like helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0278109_62	UniRef90_A0A2V2D011	878.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0278109_62	1121333.JMLH01000003_gene334	273.0	0	PIF1-like helicase	N/A
PADLOC	UHGV-0278109_62	cluster10	56.5	6.2e-19	RecD_0_IVD	CRISPR-CAS
Pfam	UHGV-0278109_62	PF05970	N/A	N/A	PIF1-like helicase	PIF1
COG	UHGV-0278109_62	COG0507	N/A	N/A	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0278109_62	PF05970,PF18350,MF_03176,TIGR02768,COG0507	N/A	N/A	N/A	N/A
PHROG	UHGV-0278109_63	phrog_8841	489.8	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0278109_63	UniRef90_A0A3A6GQS5	1273.0	0	N/A	N/A
eggNOG-mapper	UHGV-0278109_63	411460.RUMTOR_02070	530.0	0	N/A	N/A
Pfam	UHGV-0278109_63	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-0278109_63	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-0278109_63	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0278109_63	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
KOfam	UHGV-0278109_64	K02316	74.7	1.4e-21	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0278109_64	phrog_11992	126.8	1.9e-37	N/A	unknown function
UniRef90	UHGV-0278109_64	UniRef90_A0A3A6GSV7	334.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-0278109_64	411460.RUMTOR_02069	125.0	2.97e-34	CHC2 zinc finger	N/A
PADLOC	UHGV-0278109_64	drt-UG29	45.0	0.00000000000088	DRT	DRT
Pfam	UHGV-0278109_64	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0278109_64	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0278109_64	PF01807,PF00401	N/A	N/A	N/A	N/A
PHROG	UHGV-0278109_65	phrog_3490	155.3	0	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0278109_65	UniRef90_R9KEE1	260.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0278109_65	1256908.HMPREF0373_00660	268.0	0	N/A	N/A
Pfam	UHGV-0278109_65	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0278109_65	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A