UHGV-0304672 (vOTU-004178)

Viral Genome: UHGV-0304672

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0304672
vOTU ID	vOTU-004178
Representative Genome?	Yes
Source	mMGE
Original Genome ID	k141_265339_round14~402546
Associated Biosample	SAMN06115513
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	7
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9771
Viral Hallmark Genes (geNomad)	3
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Uncertain - viral or bacterial
ViralVerify Score	1.25
Jumbo Phage?	No

Genome Content
Length (bps)	64,003
GC Content	43.31%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	65
CDS Density	94%
Average CDS Length (bps)	926.12
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0304672_1	phrog_24896	301.3	0	N/A	unknown function
UniRef90	UHGV-0304672_1	UniRef90_UPI001F36D98C	2500.0	0	CotH kinase family protein	N/A
eggNOG-mapper	UHGV-0304672_1	657322.FPR_22010	438.0	0	N/A	N/A
Pfam	UHGV-0304672_1	PF08757	N/A	N/A	CotH kinase protein	CotH
structural_annotation	UHGV-0304672_1	PF19789,PF08757,PF13385,NF033188,COG5337,COG3506	N/A	N/A	N/A	N/A
UniRef90	UHGV-0304672_5	UniRef90_A0A413BQD9	234.0	0	DNA-binding protein	N/A
structural_annotation	UHGV-0304672_5	PF05930,NF033499,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0304672_7	phrog_16490	63.7	4e-18	N/A	unknown function
UniRef90	UHGV-0304672_7	UniRef90_A0A8F1B6S5	241.0	0	Outer capsid protein/viral fiber	N/A
eggNOG-mapper	UHGV-0304672_7	762982.HMPREF9442_01201	99.0	3.96e-21	N/A	N/A
structural_annotation	UHGV-0304672_8	PF10628	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0304672_9	PF21744	N/A	N/A	N/A	N/A
PHROG	UHGV-0304672_11	phrog_15037	44.2	0.0000000000025	N/A	unknown function
UniRef90	UHGV-0304672_11	UniRef90_UPI001C46F9DA	321.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-0304672_11	563008.HMPREF0665_02457	79.3	2.13e-16	N/A	N/A
structural_annotation	UHGV-0304672_11	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0304672_12	K03791	204.9	0	K03791; putative chitinase	N/A
PHROG	UHGV-0304672_12	phrog_181	175.8	0	endolysin	lysis
UniRef90	UHGV-0304672_12	UniRef90_A0A413BQK3	355.0	0	Glycoside hydrolase family 19 protein	N/A
eggNOG-mapper	UHGV-0304672_12	215803.DB30_1841	168.0	0	Peptidoglycan-binding domain 1 protein	N/A
COG	UHGV-0304672_12	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0304672_12	PF00182,COG3179	N/A	N/A	N/A	N/A
PHROG	UHGV-0304672_16	phrog_32516	284.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0304672_16	1121098.HMPREF1534_01101	320.0	0	N/A	N/A
structural_annotation	UHGV-0304672_16	PF11134,COG3292	N/A	N/A	N/A	N/A
PHROG	UHGV-0304672_20	phrog_19572	165.7	0	N/A	unknown function
UniRef90	UHGV-0304672_20	UniRef90_UPI001C4689B9	348.0	0	N/A	N/A
eggNOG-mapper	UHGV-0304672_20	537011.PREVCOP_04244	205.0	0	N/A	N/A
Pfam	UHGV-0304672_20	PF14902	N/A	N/A	N/A	DUF4494
structural_annotation	UHGV-0304672_20	PF14902	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0304672_21	PF13069	N/A	N/A	N/A	N/A
PHROG	UHGV-0304672_24	phrog_32732	84.5	9.3e-25	N/A	unknown function
UniRef90	UHGV-0304672_24	UniRef90_UPI0018EE5327	117.0	9.07e-30	N/A	N/A
eggNOG-mapper	UHGV-0304672_24	1236504.HMPREF2132_11095	71.2	0.000000000000546	N/A	N/A
dbAPIS	UHGV-0304672_24	APIS052	N/A	N/A	N/A	N/A
PHROG	UHGV-0304672_26	phrog_9467	48.1	0.0000000000001	N/A	unknown function
eggNOG-mapper	UHGV-0304672_26	411902.CLOBOL_06322	56.2	0.0000000406	Phage protein (N4 Gp49/phage Sf6 gene 66) family	N/A
dbAPIS	UHGV-0304672_26	APIS052	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0304672_29	PF19716	N/A	N/A	N/A	N/A
PHROG	UHGV-0304672_32	phrog_824	92.5	2.5e-27	N/A	unknown function
UniRef90	UHGV-0304672_32	UniRef90_A0A3D6E9A8	85.1	7.88e-18	Nuclease	N/A
eggNOG-mapper	UHGV-0304672_32	1122985.HMPREF1991_01533	83.6	3.16e-18	VRR-NUC domain	N/A
PHROG	UHGV-0304672_33	phrog_345	49.0	0.00000000000013	replication initiation O-like	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0304672_33	435591.BDI_0859	60.5	0.000000328	DnaD domain protein	N/A
COG	UHGV-0304672_33	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0304672_33	PF07106,MF_01819,TIGR01714,COG1510	N/A	N/A	N/A	N/A
KOfam	UHGV-0304672_34	K00558	161.1	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0304672_34	phrog_363	223.8	0	DNA methyltransferase	other
UniRef90	UHGV-0304672_34	UniRef90_A0A3C0D8R2	679.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-0304672_34	1227276.HMPREF9148_00139	421.0	0	DNA methylase	N/A
PADLOC	UHGV-0304672_34	MTase_II_00058	142.4	4.90034e-42	Type II methyltransferase	RM
Pfam	UHGV-0304672_34	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0304672_34	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0304672_34	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0304672_34	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
Pfam	UHGV-0304672_36	PF10269	N/A	N/A	Transmembrane Fragile-X-F protein	Tmemb_185A
eggNOG-mapper	UHGV-0304672_40	999419.HMPREF1077_02928	65.1	0.00000000000226	N/A	N/A
structural_annotation	UHGV-0304672_40	NF033787	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0304672_41	999419.HMPREF1077_02927	66.2	0.0000000000000738	N/A	N/A
PHROG	UHGV-0304672_42	phrog_874	76.3	8.5e-23	N/A	unknown function
eggNOG-mapper	UHGV-0304672_42	742767.HMPREF9456_03386	140.0	1.11e-39	N/A	N/A
structural_annotation	UHGV-0304672_42	PF04266,MF_00684,NF003443,COG2411	N/A	N/A	N/A	N/A
UniRef90	UHGV-0304672_44	UniRef90_A0A3C0D906	346.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0304672_44	709991.Odosp_3613	80.5	1.01e-16	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0304672_44	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
Pfam	UHGV-0304672_44	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0304672_44	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0304672_46	1270196.JCKI01000001_gene3597	57.4	0.00000000114	N/A	N/A
KOfam	UHGV-0304672_47	K04763	65.7	8.4e-19	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0304672_47	phrog_1	88.5	9.1e-26	integrase	integration and excision
UniRef90	UHGV-0304672_47	UniRef90_A0A3R5YAT6	943.0	0	Transposase	N/A
eggNOG-mapper	UHGV-0304672_47	679191.HMPREF9018_0670	419.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0304672_47	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
COG	UHGV-0304672_47	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0304672_47	PF13102,PF17293,NF007246,COG4973	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0304672_49	1336803.PHEL49_0023	49.7	0.00000297	N/A	N/A
KOfam	UHGV-0304672_53	K00558	115.8	3.6e-34	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0304672_53	phrog_10089	165.3	0	DarB-like antirestriction	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0304672_53	UniRef90_A0A3C0D9G0	8584.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0304672_53	563031.HMPREF0666_01152	201.0	0	Helicase C-terminal domain protein	N/A
PADLOC	UHGV-0304672_53	MTase_II_00164	93.5	3.3e-28	Type II methyltransferase	RM
Pfam	UHGV-0304672_53	PF18823	N/A	N/A	Inorganic Pyrophosphatase	InPase
Pfam	UHGV-0304672_53	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0304672_53	COG0249	N/A	N/A	DNA mismatch repair ATPase MutS	N/A
structural_annotation	UHGV-0304672_54	TIGR01689,COG0241	N/A	N/A	N/A	N/A
PHROG	UHGV-0304672_55	phrog_156	140.8	6.89999e-42	portal protein	head and packaging
eggNOG-mapper	UHGV-0304672_55	742817.HMPREF9449_01798	199.0	0	N/A	N/A
structural_annotation	UHGV-0304672_55	PF16510,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0304672_57	phrog_2	84.6	1.6e-24	terminase large subunit	head and packaging
UniRef90	UHGV-0304672_57	UniRef90_A0A413BQF7	1489.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0304672_57	1121098.HMPREF1534_01124	491.0	0	Mu-like prophage FluMu protein gp28	N/A
COG	UHGV-0304672_57	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-0304672_57	PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0304672_58	PF01694,MF_01594,NF008155,COG0705	N/A	N/A	N/A	N/A
PHROG	UHGV-0304672_60	phrog_22323	69.7	1.8e-20	N/A	unknown function
eggNOG-mapper	UHGV-0304672_60	1347393.HG726020_gene1830	56.6	0.00000144	N/A	N/A
PHROG	UHGV-0304672_61	phrog_26635	175.2	0	N/A	unknown function
UniRef90	UHGV-0304672_61	UniRef90_UPI001C38231A	240.0	0	N/A	N/A
eggNOG-mapper	UHGV-0304672_61	1227276.HMPREF9148_00159	219.0	0	N/A	N/A
structural_annotation	UHGV-0304672_61	PF17236,MF_04133,TIGR01554,COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0304672_63	PF17212	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0304672_65	657322.FPR_22010	130.0	1.05e-30	N/A	N/A