UHGV-0306993 (vOTU-011686)

Viral Genome: UHGV-0306993

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0306993
vOTU ID	vOTU-011686
Representative Genome?	Yes
Source	mMGE
Original Genome ID	DRR127685_141_147346_round13~9241898
Associated Biosample	SAMD00114931
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	99.9 (High-quality)
Trimmed?	No
CheckV Viral Markers	6
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9661
Viral Hallmark Genes (geNomad)	0
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Uncertain - viral or bacterial
ViralVerify Score	2.47
Jumbo Phage?	No

Genome Content
Length (bps)	13,599
GC Content	37.27%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	22
CDS Density	82%
Average CDS Length (bps)	508.50
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0306993_1	K14059	243.1	0	int; integrase	N/A
PHROG	UHGV-0306993_1	phrog_1	201.7	0	integrase	integration and excision
UniRef90	UHGV-0306993_1	UniRef90_J7THJ5	736.0	0	DNA integration/recombination/inversion protein	N/A
eggNOG-mapper	UHGV-0306993_1	904306.HMPREF9192_0299	730.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0306993_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0306993_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0306993_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0306993_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0306993_2	UniRef90_F9HBQ6	599.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-0306993_2	585202.SMSK321_1576	637.0	0	Virulence protein RhuM family	N/A
Pfam	UHGV-0306993_2	PF13310	N/A	N/A	Virulence protein RhuM family	Virulence_RhuM
COG	UHGV-0306993_2	COG3943	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0306993_2	PF13310,TIGR02681,COG3943	N/A	N/A	N/A	N/A
UniRef90	UHGV-0306993_3	UniRef90_A0A076Z9S2	432.0	0	EbhA	N/A
eggNOG-mapper	UHGV-0306993_3	904306.HMPREF9192_0301	459.0	0	N/A	N/A
structural_annotation	UHGV-0306993_3	PF20650	N/A	N/A	N/A	N/A
KOfam	UHGV-0306993_4	K22300	62.2	1.1e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0306993_4	phrog_8	80.0	4.6e-23	transcriptional regulator	transcription regulation
UniRef90	UHGV-0306993_4	UniRef90_A0A3E4XIW0	367.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0306993_4	910313.HMPREF9320_0986	191.0	0	Transcriptional	N/A
Pfam	UHGV-0306993_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0306993_4	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0306993_4	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0306993_5	phrog_11187	68.6	5.7e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0306993_5	UniRef90_T0UVS0	114.0	4.63e-32	Repressor-related protein	N/A
eggNOG-mapper	UHGV-0306993_5	585203.SMSK564_1592	54.3	0.00000000351	N/A	N/A
structural_annotation	UHGV-0306993_5	PF13560,NF007271,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0306993_6	phrog_2657	146.6	1.4013e-43	transcriptional regulator	transcription regulation
UniRef90	UHGV-0306993_6	UniRef90_T0V1U5	359.0	0	Prophage ps3 protein 13	N/A
eggNOG-mapper	UHGV-0306993_6	997830.HMPREF1124_0207	362.0	0	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-0306993_6	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
COG	UHGV-0306993_6	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-0306993_6	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-0306993_11	phrog_2113	77.3	1.4e-22	N/A	unknown function
UniRef90	UHGV-0306993_11	UniRef90_A0A3S4QFL9	170.0	0	Phage related protein	N/A
eggNOG-mapper	UHGV-0306993_11	1035187.HMPREF9959_1399	82.4	9.18e-19	N/A	N/A
structural_annotation	UHGV-0306993_11	PF11994,MF_01177,TIGR02944,COG1959	N/A	N/A	N/A	N/A
PHROG	UHGV-0306993_12	phrog_10458	67.2	2.1e-19	N/A	unknown function
UniRef90	UHGV-0306993_12	UniRef90_A0A0E2Q1M6	170.0	0	HTH merR-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0306993_12	768726.HMPREF9178_1171	108.0	6.62e-30	N/A	N/A
structural_annotation	UHGV-0306993_12	PF05930,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0306993_13	phrog_5708	147.8	9.94922e-44	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0306993_13	UniRef90_A0A0P6SK14	182.0	0	DNA replication protein	N/A
eggNOG-mapper	UHGV-0306993_13	1123299.AUKZ01000018_gene209	173.0	0	Replication initiation and membrane attachment	N/A
COG	UHGV-0306993_13	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
KOfam	UHGV-0306993_14	K02086	81.3	1.3e-23	dnaD; DNA replication protein	N/A
PHROG	UHGV-0306993_14	phrog_186	82.2	9.1e-24	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0306993_14	UniRef90_A0A074ITC2	240.0	0	DnaB_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0306993_14	1123314.AUIO01000004_gene1105	136.0	9.18e-38	DnaD domain protein	N/A
Pfam	UHGV-0306993_14	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0306993_14	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-0306993_14	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
KOfam	UHGV-0306993_15	K02315	164.5	0	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0306993_15	phrog_50	162.2	0	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0306993_15	UniRef90_A0A074J2K7	552.0	0	GTP-binding protein	N/A
eggNOG-mapper	UHGV-0306993_15	862971.SANR_2031	347.0	0	IstB-like ATP binding protein	N/A
Pfam	UHGV-0306993_15	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0306993_15	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0306993_15	PF01695,MF_00377,NF005931,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0306993_16	phrog_248	62.7	1e-17	transcriptional activator	transcription regulation
UniRef90	UHGV-0306993_16	UniRef90_W1TSX5	91.7	9.12e-20	Phage encoded transcriptional regulator, ArpU family protein	N/A
eggNOG-mapper	UHGV-0306993_16	1403946.Q615_SPAC00127G0144	91.7	1.53e-20	Transcriptional regulator, ArpU family	N/A
NCBIFam	UHGV-0306993_16	TIGR01637.1	N/A	N/A	ArpU family phage packaging/lysis transcriptional regulator	N/A
AcrCatalog	UHGV-0306993_17	cluster_1614	223.0	0	NA	N/A
PHROG	UHGV-0306993_18	phrog_248	111.8	6.3e-33	transcriptional activator	transcription regulation
UniRef90	UHGV-0306993_18	UniRef90_E8KT63	264.0	0	Phage transcriptional regulator, ArpU family	N/A
eggNOG-mapper	UHGV-0306993_18	936154.STP_1292	106.0	1.52e-27	Transcriptional regulator, ArpU family	N/A
NCBIFam	UHGV-0306993_18	TIGR01637.1	N/A	N/A	ArpU family phage packaging/lysis transcriptional regulator	N/A
structural_annotation	UHGV-0306993_18	PF05263,MF_00674,TIGR01637,COG1191	N/A	N/A	N/A	N/A
UniRef90	UHGV-0306993_19	UniRef90_J7TQS8	273.0	0	N/A	N/A
eggNOG-mapper	UHGV-0306993_19	365659.smi_2002	112.0	2.68e-29	N/A	N/A
PHROG	UHGV-0306993_20	phrog_2133	87.7	5.5e-26	N/A	unknown function
UniRef90	UHGV-0306993_20	UniRef90_A0A3E2SCC4	84.0	3.88e-20	Paratox	N/A
PHROG	UHGV-0306993_21	phrog_5978	156.8	0	N/A	unknown function
UniRef90	UHGV-0306993_21	UniRef90_A0A3E4XIV4	801.0	0	Fic family protein	N/A
eggNOG-mapper	UHGV-0306993_21	218495.SUB1818	566.0	0	Fic/DOC family	N/A
Pfam	UHGV-0306993_21	PF02661	N/A	N/A	Fic/DOC family	Fic
COG	UHGV-0306993_21	COG3177	N/A	N/A	Fic family protein	N/A
structural_annotation	UHGV-0306993_21	PF07183,MF_01911,NF040876,COG3177	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0306993_22	904306.HMPREF9192_0315	64.3	0.00000000000916	Endoribonuclease that initiates mRNA decay	N/A
COG	UHGV-0306993_22	COG1418	N/A	N/A	HD superfamily phosphodieaserase, includes HD domain of RNase Y	N/A