UHGV-0331670 (vOTU-138433)

Viral Genome: UHGV-0331670

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0331670
vOTU ID	vOTU-138433
Representative Genome?	Yes
Source	mMGE
Original Genome ID	k99_149049_round1256~2817585
Associated Biosample	SAMEA4812190
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	72.76 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	8
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9821
Viral Hallmark Genes (geNomad)	4
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	25.9
Jumbo Phage?	No

Genome Content
Length (bps)	30,656
GC Content	53.14%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	62
CDS Density	90%
Average CDS Length (bps)	443.03
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 72.76)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0331670_2	phrog_13879	248.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0331670_2	1226322.HMPREF1545_00061	497.0	0	N/A	N/A
structural_annotation	UHGV-0331670_2	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0331670_3	phrog_1194	60.3	3.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0331670_3	1226322.HMPREF1545_00060	238.0	0	N/A	N/A
structural_annotation	UHGV-0331670_3	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0331670_4	phrog_1535	84.2	1.7e-38	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0331670_4	693746.OBV_18190	367.0	0	domain protein	N/A
COG	UHGV-0331670_4	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0331670_4	PF05546,TIGR02559	N/A	N/A	N/A	N/A
KOfam	UHGV-0331670_5	K06909	79.9	3.6e-23	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0331670_5	phrog_2	113.0	4.9e-33	terminase large subunit	head and packaging
UniRef90	UHGV-0331670_5	UniRef90_A0A3D3Y0N9	414.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0331670_5	1226322.HMPREF1545_00043	384.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0331670_5	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0331670_5	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0331670_5	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0331670_5	PF04466,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0331670_6	1297617.JPJD01000020_gene313	87.4	3.9e-22	N/A	N/A
UniRef90	UHGV-0331670_7	UniRef90_UPI0009523D83	164.0	0	helix-turn-helix domain containing protein	N/A
eggNOG-mapper	UHGV-0331670_7	1226322.HMPREF1545_00042	155.0	0	N/A	N/A
structural_annotation	UHGV-0331670_7	PF13542	N/A	N/A	N/A	N/A
Pfam	UHGV-0331670_8	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-0331670_9	PF06003,MF_01354,TIGR00739,COG5475	N/A	N/A	N/A	N/A
UniRef90	UHGV-0331670_11	UniRef90_A0A8D9PDT5	228.0	0	Hydrogenase/urease nickel incorporation protein	N/A
PHROG	UHGV-0331670_13	phrog_2470	55.8	6.9e-16	membrane protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0331670_13	UniRef90_A0A414ZRJ4	128.0	1.14e-36	N/A	N/A
eggNOG-mapper	UHGV-0331670_13	649747.HMPREF0083_06229	50.1	0.00000243	N/A	N/A
Pfam	UHGV-0331670_13	PF11750	N/A	N/A	N/A	DUF3307
structural_annotation	UHGV-0331670_13	PF11750	N/A	N/A	N/A	N/A
PHROG	UHGV-0331670_14	phrog_599	48.5	0.0000000000002	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0331670_14	UniRef90_A0A845MWR1	86.3	5.34e-21	Restriction alleviation protein, Lar family	N/A
Pfam	UHGV-0331670_14	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
dbAPIS	UHGV-0331670_14	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-0331670_14	PF14354,NF007260	N/A	N/A	N/A	N/A
PHROG	UHGV-0331670_15	phrog_38832	47.1	0.00000000000025	N/A	unknown function
UniRef90	UHGV-0331670_17	UniRef90_A0A8D9PDK1	75.1	0.00000000000000399	Anti-repressor	N/A
KOfam	UHGV-0331670_19	K00390	49.9	0.0000000000000056	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0331670_19	phrog_424	118.7	5.2e-35	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0331670_19	UniRef90_A0A1H7KWC5	315.0	0	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase	N/A
eggNOG-mapper	UHGV-0331670_19	665956.HMPREF1032_00140	272.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0331670_19	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0331670_19	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0331670_19	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-0331670_21	K00571	99.8	1.3e-29	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0331670_21	phrog_67	74.9	1.6e-30	DNA methyltransferase	other
UniRef90	UHGV-0331670_21	UniRef90_UPI001331804A	273.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0331670_21	1268240.ATFI01000007_gene431	207.0	0	DNA methylase	N/A
PADLOC	UHGV-0331670_21	MTase_II_00172	132.9	2.8e-39	Type II methyltransferase	RM
Pfam	UHGV-0331670_21	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0331670_21	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0331670_21	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0331670_23	phrog_190	111.8	5.4e-33	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0331670_23	UniRef90_A0A8D9PDD6	256.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-0331670_23	1226322.HMPREF1545_00295	118.0	9.06e-32	N/A	N/A
Pfam	UHGV-0331670_23	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0331670_23	PF06356	N/A	N/A	N/A	N/A
UniRef90	UHGV-0331670_25	UniRef90_A0A8D9PDS1	51.6	0.00000812	Replisome organizer	N/A
structural_annotation	UHGV-0331670_25	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0331670_26	phrog_15768	45.1	0.0000000000021	N/A	unknown function
UniRef90	UHGV-0331670_26	UniRef90_UPI0019563B2C	78.2	6.88e-17	N/A	N/A
eggNOG-mapper	UHGV-0331670_26	1121344.JHZO01000003_gene982	58.2	0.00000000435	N/A	N/A
Pfam	UHGV-0331670_26	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0331670_26	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0331670_29	K03111	144.4	1.19951e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0331670_29	phrog_44	144.7	5.10073e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0331670_29	UniRef90_A0A352RPR0	201.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0331670_29	1007096.BAGW01000023_gene151	200.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0331670_29	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0331670_29	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0331670_29	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0331670_29	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0331670_29	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0331670_30	phrog_7566	98.2	4.7e-29	N/A	unknown function
UniRef90	UHGV-0331670_30	UniRef90_A0A8D9UHC0	179.0	0	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-0331670_30	1007096.BAGW01000031_gene114	125.0	4.69e-36	N/A	N/A
PHROG	UHGV-0331670_31	phrog_72	50.9	0.000000000000012	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0331670_31	UniRef90_A0A8D9PDS2	338.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0331670_31	445972.ANACOL_01825	135.0	4.41e-38	N/A	N/A
structural_annotation	UHGV-0331670_31	PF05772	N/A	N/A	N/A	N/A
UniRef90	UHGV-0331670_32	UniRef90_B0PAM4	155.0	9.80909e-45	YqaJ domain-containing protein	N/A
structural_annotation	UHGV-0331670_32	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
UniRef90	UHGV-0331670_33	UniRef90_A0A845QLQ8	189.0	0	N/A	N/A
eggNOG-mapper	UHGV-0331670_33	33035.JPJF01000135_gene5082	115.0	2.03e-29	N/A	N/A
Pfam	UHGV-0331670_33	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0331670_33	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
UniRef90	UHGV-0331670_35	UniRef90_A0A8D9UH91	314.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0331670_35	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
structural_annotation	UHGV-0331670_35	PF01381,PF21715,NF041951,TIGR04176,COG1476,COG1654	N/A	N/A	N/A	N/A
PHROG	UHGV-0331670_36	phrog_4433	166.1	0	N/A	unknown function
UniRef90	UHGV-0331670_36	UniRef90_UPI00045B9709	92.4	9.93e-20	collagen-like protein	N/A
eggNOG-mapper	UHGV-0331670_36	106648.BBLJ01000054_gene3814	103.0	2.66e-25	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0331670_36	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0331670_36	NF007410	N/A	N/A	N/A	N/A
Pfam	UHGV-0331670_40	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
PHROG	UHGV-0331670_41	phrog_8	43.8	0.0000000000057	transcriptional regulator	transcription regulation
UniRef90	UHGV-0331670_41	UniRef90_A0A1V0QCF9	84.7	4.64e-19	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0331670_41	1226322.HMPREF1545_00148	62.0	0.0000000000732	Transcriptional	N/A
Pfam	UHGV-0331670_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0331670_41	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0331670_41	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0331670_44	UniRef90_A0A8D9UHA6	286.0	0	Helix-turn-helix XRE-family like protein	N/A
Pfam	UHGV-0331670_44	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0331670_44	PF12844,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0331670_45	K06400	286.6	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0331670_45	phrog_95	284.9	0	integrase	integration and excision
UniRef90	UHGV-0331670_45	UniRef90_A0A1C6HT72	370.0	0	Resolvase, N terminal domain	N/A
eggNOG-mapper	UHGV-0331670_45	357809.Cphy_2997	272.0	0	COG COG1961 Site-specific recombinases, DNA invertase Pin homologs	N/A
Pfam	UHGV-0331670_45	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0331670_45	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0331670_45	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0331670_45	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0331670_46	1226322.HMPREF1545_00079	82.8	3.81e-19	N/A	N/A
PHROG	UHGV-0331670_47	phrog_28802	67.6	1.4e-19	N/A	unknown function
structural_annotation	UHGV-0331670_47	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0331670_48	phrog_20016	200.1	0	N/A	unknown function
UniRef90	UHGV-0331670_48	UniRef90_A0A285PT46	190.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0331670_48	1226322.HMPREF1545_00077	169.0	0	N/A	N/A
structural_annotation	UHGV-0331670_48	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0331670_49	phrog_16490	140.3	1.79997e-41	N/A	unknown function
eggNOG-mapper	UHGV-0331670_49	658655.HMPREF0988_00917	132.0	4.55e-35	N/A	N/A
PHROG	UHGV-0331670_50	phrog_22984	86.8	1.4e-25	N/A	unknown function
PHROG	UHGV-0331670_51	phrog_21718	106.1	3e-31	N/A	unknown function
eggNOG-mapper	UHGV-0331670_51	397290.C810_05210	73.2	0.0000000000000362	N/A	N/A
PHROG	UHGV-0331670_52	phrog_3754	120.1	1.5e-35	N/A	unknown function
eggNOG-mapper	UHGV-0331670_52	1226322.HMPREF1545_00073	174.0	0	N/A	N/A
KOfam	UHGV-0331670_54	K01448	44.1	0.0000000000025	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0331670_54	phrog_435	85.6	7.8e-25	endolysin	lysis
UniRef90	UHGV-0331670_54	UniRef90_A0A8D9PDS4	419.0	0	Cell wall hydrolase/autolysin	N/A
eggNOG-mapper	UHGV-0331670_54	1226322.HMPREF1545_01953	83.2	2.43e-16	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0331670_54	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0331670_54	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0331670_54	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0331670_55	phrog_1129	75.0	6.5e-22	holin	lysis
UniRef90	UHGV-0331670_55	UniRef90_A0A8D9PDD4	182.0	0	Holin	N/A
eggNOG-mapper	UHGV-0331670_55	1226322.HMPREF1545_00069	111.0	8.74e-31	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0331670_55	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0331670_55	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0331670_56	phrog_4105	102.6	2.3e-30	N/A	unknown function
UniRef90	UHGV-0331670_56	UniRef90_A0A8D9UHA9	204.0	0	Holin protein	N/A
eggNOG-mapper	UHGV-0331670_56	411460.RUMTOR_01326	139.0	9.54004e-42	N/A	N/A
PHROG	UHGV-0331670_58	phrog_2310	59.1	4.3e-17	N/A	unknown function
eggNOG-mapper	UHGV-0331670_58	1151292.QEW_0364	52.8	0.00000000829	N/A	N/A
PHROG	UHGV-0331670_61	phrog_2295	43.7	1.3e-19	N/A	unknown function
Pfam	UHGV-0331670_61	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-0331670_61	PF21722	N/A	N/A	N/A	N/A
PHROG	UHGV-0331670_62	phrog_2295	49.1	9.7e-17	N/A	unknown function
Pfam	UHGV-0331670_62	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-0331670_62	PF21722	N/A	N/A	N/A	N/A