UHGV-0333785 (vOTU-070181)

Viral Genome: UHGV-0333785

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0333785
vOTU ID	vOTU-070181
Representative Genome?	Yes
Source	mMGE
Original Genome ID	k141_46674_round13~9178285
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	98.85 (High-quality)
Trimmed?	No
CheckV Viral Markers	19
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9813
Viral Hallmark Genes (geNomad)	8
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	50.69
Jumbo Phage?	No

Genome Content
Length (bps)	40,808
GC Content	37.16%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	55
CDS Density	96%
Average CDS Length (bps)	713.89
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 98.85)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0333785_2	phrog_10797	217.9	0	N/A	unknown function
UniRef90	UHGV-0333785_2	UniRef90_A0A1B1I041	133.0	1.41e-35	Glycoprotease	N/A
eggNOG-mapper	UHGV-0333785_2	883156.HMPREF9282_01266	147.0	1.61009e-42	N/A	N/A
structural_annotation	UHGV-0333785_2	PF06531	N/A	N/A	N/A	N/A
KOfam	UHGV-0333785_3	K08640	105.0	1.1e-30	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0333785_3	phrog_894	104.3	1.2e-30	endolysin	lysis
UniRef90	UHGV-0333785_3	UniRef90_A0A496P8E9	278.0	0	N/A	N/A
eggNOG-mapper	UHGV-0333785_3	613026.HRAG_01219	99.0	2.02e-24	N/A	N/A
Pfam	UHGV-0333785_3	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0333785_3	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0333785_3	PF08291,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0333785_5	phrog_23091	216.7	0	N/A	unknown function
structural_annotation	UHGV-0333785_5	PF05105,NF035928	N/A	N/A	N/A	N/A
KOfam	UHGV-0333785_7	K13925	40.3	0.000000000013	pfbA; plasmin and fibronectin-binding protein A	N/A
UniRef90	UHGV-0333785_7	UniRef90_A0A2S7ZGN5	1230.0	0	Pectate_lyase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0333785_7	1443111.JASG01000004_gene3704	61.2	0.00000122	Pectate lyase superfamily protein	N/A
Pfam	UHGV-0333785_7	PF12708	N/A	N/A	Pectate lyase superfamily protein	Pectate_lyase_3
COG	UHGV-0333785_7	COG5434	N/A	N/A	Polygalacturonase	N/A
structural_annotation	UHGV-0333785_7	PF05096,PF03906,MF_03008,TIGR03866,COG3204	N/A	N/A	N/A	N/A
KOfam	UHGV-0333785_8	K20478	83.2	4.4e-25	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-0333785_8	phrog_9880	213.2	0	N/A	unknown function
UniRef90	UHGV-0333785_8	UniRef90_A0A239Z8B8	2489.0	0	LPD3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0333785_8	699218.HMPREF0889_0277	473.0	0	N/A	N/A
Pfam	UHGV-0333785_8	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
KOfam	UHGV-0333785_9	K21471	67.4	8.4e-20	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	N/A
UniRef90	UHGV-0333785_9	UniRef90_A0A096AJQ8	325.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-0333785_9	1401067.HMPREF0872_06760	325.0	0	N/A	N/A
Pfam	UHGV-0333785_9	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
structural_annotation	UHGV-0333785_9	PF01464,COG0741	N/A	N/A	N/A	N/A
PHROG	UHGV-0333785_10	phrog_418	68.9	6e-20	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0333785_10	1401067.HMPREF0872_06765	173.0	0	N/A	N/A
structural_annotation	UHGV-0333785_10	PF05384,TIGR01010,COG3524	N/A	N/A	N/A	N/A
PHROG	UHGV-0333785_11	phrog_308	75.3	9.1e-22	internal virion protein	head and packaging
UniRef90	UHGV-0333785_11	UniRef90_UPI001D08FF44	334.0	0	N/A	N/A
Pfam	UHGV-0333785_11	PF11090	N/A	N/A	Bacteriophage T7, probable scaffold protein Gp13	Phage_T7_Gp13
structural_annotation	UHGV-0333785_11	PF11039,MF_02210,NF000165,COG1247	N/A	N/A	N/A	N/A
PHROG	UHGV-0333785_12	phrog_376	636.4	0	tail protein	tail
UniRef90	UHGV-0333785_12	UniRef90_A0A3A4JUE0	324.0	0	E1_FCCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0333785_12	1401067.HMPREF0872_06775	636.0	0	N/A	N/A
structural_annotation	UHGV-0333785_12	PF11134,MF_00923,TIGR03300,COG2706	N/A	N/A	N/A	N/A
PHROG	UHGV-0333785_13	phrog_394	171.6	0	tail protein	tail
eggNOG-mapper	UHGV-0333785_13	1401067.HMPREF0872_06780	211.0	0	N/A	N/A
structural_annotation	UHGV-0333785_13	PF17212	N/A	N/A	N/A	N/A
PHROG	UHGV-0333785_15	phrog_427	41.9	0.000000000017	N/A	unknown function
structural_annotation	UHGV-0333785_15	PF21190	N/A	N/A	N/A	N/A
PHROG	UHGV-0333785_16	phrog_212	164.9	0	major head protein	head and packaging
UniRef90	UHGV-0333785_16	UniRef90_A0A239Z8I8	650.0	0	Phage capsid family	N/A
eggNOG-mapper	UHGV-0333785_16	1401067.HMPREF0872_06795	372.0	0	N/A	N/A
Pfam	UHGV-0333785_16	PF20911	N/A	N/A	Major capsid protein GP7	GP7
structural_annotation	UHGV-0333785_16	PF20911,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0333785_17	phrog_458	89.8	4.1e-26	protease	other
eggNOG-mapper	UHGV-0333785_17	1401067.HMPREF0872_06800	117.0	3.29e-30	N/A	N/A
PHROG	UHGV-0333785_18	phrog_528	64.1	1.4e-18	N/A	unknown function
eggNOG-mapper	UHGV-0333785_18	568816.Acin_1833	64.7	0.00000000000421	N/A	N/A
PHROG	UHGV-0333785_19	phrog_332	465.5	0	head-tail adaptor	connector
UniRef90	UHGV-0333785_19	UniRef90_UPI001D07F371	1093.0	0	portal protein	N/A
eggNOG-mapper	UHGV-0333785_19	1401067.HMPREF0872_06810	594.0	0	Bacteriophage head to tail connecting protein	N/A
Pfam	UHGV-0333785_19	PF12236	N/A	N/A	Bacteriophage head to tail connecting protein	Head-tail_con
structural_annotation	UHGV-0333785_19	PF12236,MF_04120,TIGR01538,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0333785_21	phrog_5902	253.9	0	N/A	unknown function
UniRef90	UHGV-0333785_21	UniRef90_UPI0018A6EFE4	582.0	0	terminase	N/A
eggNOG-mapper	UHGV-0333785_21	1200557.JHWV01000001_gene277	585.0	0	Terminase RNaseH-like domain	N/A
COG	UHGV-0333785_21	COG0507	N/A	N/A	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0333785_21	PF03237,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0333785_22	K07474	130.8	1.8e-38	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0333785_22	phrog_51	135.2	3.09999e-40	terminase small subunit	head and packaging
UniRef90	UHGV-0333785_22	UniRef90_A0A2S7ZGQ0	253.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0333785_22	1280689.AUJC01000003_gene961	121.0	1.37e-33	Terminase small subunit	N/A
Pfam	UHGV-0333785_22	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0333785_22	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0333785_22	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0333785_26	phrog_36	48.8	0.00000000000013	transcriptional regulator	transcription regulation
UniRef90	UHGV-0333785_26	UniRef90_D1YMC4	87.4	4.71e-19	Phage transcriptional regulator, ArpU family	N/A
eggNOG-mapper	UHGV-0333785_26	706434.HMPREF9429_00383	50.4	0.00000935	N/A	N/A
structural_annotation	UHGV-0333785_26	PF07374,TIGR02984	N/A	N/A	N/A	N/A
PHROG	UHGV-0333785_28	phrog_21026	68.5	1.2e-20	N/A	unknown function
KOfam	UHGV-0333785_32	K19232	119.8	1e-39	btaE; hyaluronate-binding autotransporter adhesin	N/A
UniRef90	UHGV-0333785_32	UniRef90_UPI001D068F5F	424.0	0	YadA-like family protein	N/A
eggNOG-mapper	UHGV-0333785_32	1128111.HMPREF0870_01786	169.0	5.60519e-45	Hep Hag repeat protein	N/A
Pfam	UHGV-0333785_32	PF05658	N/A	N/A	YadA head domain repeat (2 copies)	YadA_head
Pfam	UHGV-0333785_32	PF05662	N/A	N/A	Coiled stalk of trimeric autotransporter adhesin	YadA_stalk
Pfam	UHGV-0333785_32	PF03895	N/A	N/A	YadA-like membrane anchor domain	YadA_anchor
COG	UHGV-0333785_32	COG5295	N/A	N/A	Autotransporter adhesin	N/A
structural_annotation	UHGV-0333785_32	PF03895,NF033478,COG5295	N/A	N/A	N/A	N/A
KOfam	UHGV-0333785_33	K01520	148.0	6.86636e-44	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0333785_33	phrog_135	149.1	1.82169e-44	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0333785_33	UniRef90_UPI001D0611B8	270.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0333785_33	1284686.HMPREF1630_09220	122.0	5.4e-34	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	N/A
Pfam	UHGV-0333785_33	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0333785_33	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0333785_33	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0333785_33	PF00692,MF_00116,NF001862,COG0756	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0333785_34	PF13384,NF040595	N/A	N/A	N/A	N/A
PHROG	UHGV-0333785_35	phrog_244	79.4	5.6e-23	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0333785_35	UniRef90_A0A841R0Q1	153.0	0	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-0333785_35	1123250.KB908417_gene653	139.0	3.64996e-41	N/A	N/A
structural_annotation	UHGV-0333785_35	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
KOfam	UHGV-0333785_36	K00571	118.6	7.3e-35	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0333785_36	phrog_67	97.0	1.4e-29	DNA methyltransferase	other
UniRef90	UHGV-0333785_36	UniRef90_UPI00196047F8	512.0	0	site-specific DNA-methyltransferase	N/A
eggNOG-mapper	UHGV-0333785_36	749222.Nitsa_1817	390.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-0333785_36	MTase_II_00157	101.3	2.1e-30	Type II methyltransferase	RM
Pfam	UHGV-0333785_36	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0333785_36	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0333785_36	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0333785_37	phrog_1672	49.0	0.000000000000098	N/A	unknown function
UniRef90	UHGV-0333785_37	UniRef90_F5L204	106.0	7.09e-27	Conserved domain protein	N/A
structural_annotation	UHGV-0333785_38	PF16857,MF_00273	N/A	N/A	N/A	N/A
KOfam	UHGV-0333785_39	K03111	142.3	5.4006e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0333785_39	phrog_44	120.1	1.7e-35	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0333785_39	UniRef90_UPI001D069DF3	230.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0333785_39	936589.HMPREF1521_1228	206.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0333785_39	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0333785_39	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0333785_39	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0333785_39	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0333785_39	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0333785_42	phrog_9804	74.6	1.5e-21	N/A	unknown function
structural_annotation	UHGV-0333785_42	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-0333785_43	K02315	40.9	0.000000000024	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0333785_43	phrog_5968	168.8	0	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0333785_43	UniRef90_A0A2S7ZGS0	378.0	0	Replisome organizer	N/A
eggNOG-mapper	UHGV-0333785_43	411473.RUMCAL_00873	168.0	0	Phage replisome organizer, N-terminal domain protein	N/A
Pfam	UHGV-0333785_43	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0333785_43	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-0333785_43	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0333785_43	PF09681,TIGR01714,COG0640	N/A	N/A	N/A	N/A
KOfam	UHGV-0333785_45	K07451	52.8	0.0000000000000078	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0333785_45	phrog_7370	59.3	6.1e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0333785_45	UniRef90_A0A2S7ZGY4	155.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-0333785_45	1121121.KB894312_gene3190	55.5	0.0000000126	HNH endonuclease	N/A
Pfam	UHGV-0333785_45	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0333785_45	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0333785_45	PF01844,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-0333785_46	phrog_72	61.2	1.5e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0333785_46	UniRef90_R5BGH3	129.0	9.9e-35	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0333785_46	1507.HMPREF0262_00432	99.4	9.85e-24	N/A	N/A
PHROG	UHGV-0333785_47	phrog_2324	163.9	0	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0333785_47	UniRef90_UPI001402D75D	317.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0333785_47	1209989.TepiRe1_1126	139.0	8.44e-39	ERF superfamily	N/A
Pfam	UHGV-0333785_47	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0333785_47	PF04404,TIGR00607,COG5055	N/A	N/A	N/A	N/A
PHROG	UHGV-0333785_48	phrog_674	66.3	9.2e-20	N/A	unknown function
UniRef90	UHGV-0333785_48	UniRef90_UPI000E71DE97	498.0	0	N/A	N/A
eggNOG-mapper	UHGV-0333785_48	1391647.AVSV01000003_gene1789	77.0	0.000000000000254	N/A	N/A
Pfam	UHGV-0333785_48	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0333785_48	PF07083	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0333785_49	NF008912	N/A	N/A	N/A	N/A
PHROG	UHGV-0333785_50	phrog_7735	80.9	1.3e-23	excisionase	integration and excision
UniRef90	UHGV-0333785_50	UniRef90_UPI001D08B64F	158.0	0	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0333785_50	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-0333785_50	PF12728,MF_01155,NF033787,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0333785_52	phrog_2967	62.3	7.8e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0333785_52	UniRef90_UPI001D073245	210.0	0	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0333785_52	861450.HMPREF0080_02022	142.0	7.7702e-42	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0333785_52	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0333785_52	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0333785_52	PF12844,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0333785_54	phrog_20936	113.2	1e-33	N/A	unknown function
UniRef90	UHGV-0333785_54	UniRef90_UPI001D086FA7	172.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0333785_54	706434.HMPREF9429_00182	60.5	0.0000000000582	N/A	N/A
Pfam	UHGV-0333785_54	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-0333785_54	PF06114	N/A	N/A	N/A	N/A
KOfam	UHGV-0333785_55	K14059	215.4	0	int; integrase	N/A
PHROG	UHGV-0333785_55	phrog_1	200.4	0	integrase	integration and excision
UniRef90	UHGV-0333785_55	UniRef90_UPI001D0692F2	678.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0333785_55	1232428.CAVO010000003_gene1025	268.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0333785_55	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-0333785_55	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0333785_55	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0333785_55	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0333785_55	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A