UHGV-0342425 (vOTU-050840)

Viral Genome: UHGV-0342425

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0342425
vOTU ID	vOTU-050840
Representative Genome?	Yes
Source	mMGE
Original Genome ID	k141_188889_round13~9500233
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	12
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9791
Viral Hallmark Genes (geNomad)	6
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	10.82
Jumbo Phage?	No

Genome Content
Length (bps)	45,823
GC Content	51.83%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	52
CDS Density	93%
Average CDS Length (bps)	821.08
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0342425_1	phrog_21376	47.1	1.7e-17	N/A	unknown function
eggNOG-mapper	UHGV-0342425_1	1226322.HMPREF1545_00787	111.0	3.74e-21	N/A	N/A
Pfam	UHGV-0342425_1	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
Pfam	UHGV-0342425_1	PF18838	N/A	N/A	Large polyvalent protein associated domain 23	LPD23
Pfam	UHGV-0342425_1	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
PHROG	UHGV-0342425_3	phrog_156	201.7	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0342425_3	1519439.JPJG01000060_gene1886	408.0	0	N/A	N/A
structural_annotation	UHGV-0342425_3	PF16510,MF_04120,TIGR01542,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0342425_4	K21523	70.6	1.1e-20	gp17; terminase, large subunit [EC:3.1.-.-]	N/A
PHROG	UHGV-0342425_4	phrog_2	99.1	7e-29	terminase large subunit	head and packaging
UniRef90	UHGV-0342425_4	UniRef90_UPI001F401ABC	398.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-0342425_4	696281.Desru_1088	192.0	0	Phage terminase large subunit	N/A
COG	UHGV-0342425_4	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0342425_4	PF03354,PF17289,MF_04146,TIGR01547,COG4373	N/A	N/A	N/A	N/A
PHROG	UHGV-0342425_5	phrog_3064	73.0	3.1e-21	terminase	head and packaging
UniRef90	UHGV-0342425_5	UniRef90_A0A2I7QK24	75.1	0.0000000000000788	Coil containing protein (Fragment)	N/A
PHROG	UHGV-0342425_8	phrog_918	110.2	7.3e-33	N/A	unknown function
UniRef90	UHGV-0342425_8	UniRef90_UPI001D020797	124.0	1.79e-35	N/A	N/A
eggNOG-mapper	UHGV-0342425_8	1499683.CCFF01000014_gene3910	120.0	1.47e-34	N/A	N/A
Pfam	UHGV-0342425_8	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0342425_8	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0342425_14	phrog_1571	67.9	3.1e-30	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0342425_14	UniRef90_A0A1Q9J7B4	148.0	1.12104e-44	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-0342425_14	702438.HMPREF9431_00759	136.0	8.61995e-41	HNH endonuclease	N/A
PADLOC	UHGV-0342425_14	ZorE2_00001	40.7	0.000000000061	HNH endonuclease	Zorya
COG	UHGV-0342425_14	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0342425_14	NF008448	N/A	N/A	N/A	N/A
KOfam	UHGV-0342425_15	K00558	208.2	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0342425_15	phrog_116	250.1	0	DNA methyltransferase	other
UniRef90	UHGV-0342425_15	UniRef90_A0A2Z4GUI8	598.0	0	Site-specific DNA methylase	N/A
eggNOG-mapper	UHGV-0342425_15	1519439.JPJG01000060_gene1872	490.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-0342425_15	MTase_II_00164	82.7	1.5e-30	Type II methyltransferase	RM
Pfam	UHGV-0342425_15	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0342425_15	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0342425_15	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0342425_18	phrog_1029	206.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0342425_18	1519439.JPJG01000059_gene1911	150.0	2.54055e-42	N/A	N/A
structural_annotation	UHGV-0342425_18	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-0342425_19	phrog_997	68.9	9.6e-20	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0342425_19	UniRef90_UPI0011581F2E	55.8	0.000000177	replication terminator protein	N/A
eggNOG-mapper	UHGV-0342425_19	562743.JH976434_gene1044	53.5	0.00000028	N/A	N/A
KOfam	UHGV-0342425_20	K03111	141.7	7.90052e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0342425_20	phrog_44	131.8	5e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0342425_20	UniRef90_A0A2V2ET02	192.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0342425_20	1121423.JONT01000003_gene1118	116.0	1.77e-31	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0342425_20	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0342425_20	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0342425_20	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0342425_20	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0342425_20	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0342425_21	K03111	51.2	0.000000000000024	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0342425_21	phrog_26861	86.8	1e-25	N/A	unknown function
UniRef90	UHGV-0342425_21	UniRef90_A0A3D2K7P5	172.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0342425_21	1304880.JAGB01000001_gene702	167.0	0	PFAM single-strand binding protein Primosomal replication protein n	N/A
Pfam	UHGV-0342425_21	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0342425_21	NF004476.0	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0342425_21	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0342425_21	PF00436,PF13567,MF_00984,NF004476,COG0629	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0342425_22	742817.HMPREF9449_01803	82.0	8.34e-16	N/A	N/A
structural_annotation	UHGV-0342425_22	PF14297,TIGR01714,COG3756	N/A	N/A	N/A	N/A
KOfam	UHGV-0342425_23	K01160	49.9	0.000000000000093	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0342425_23	phrog_140	124.1	9e-37	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0342425_23	UniRef90_A0A350TIB2	115.0	3.06e-30	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0342425_23	1123263.AUKY01000072_gene2102	107.0	5.93e-28	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0342425_23	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0342425_23	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0342425_23	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0342425_24	K07455	182.2	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0342425_24	phrog_148	197.5	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0342425_24	UniRef90_UPI000F53F699	340.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-0342425_24	1408437.JNJN01000039_gene372	293.0	0	RecT family	N/A
Pfam	UHGV-0342425_24	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0342425_24	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0342425_24	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0342425_24	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0342425_25	phrog_674	156.3	0	N/A	unknown function
UniRef90	UHGV-0342425_25	UniRef90_A0A4P9C8L7	152.0	6.01998e-41	N/A	N/A
eggNOG-mapper	UHGV-0342425_25	658655.HMPREF0988_02587	93.2	3.56e-19	N/A	N/A
Pfam	UHGV-0342425_25	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0342425_25	PF07083	N/A	N/A	N/A	N/A
PHROG	UHGV-0342425_26	phrog_434	137.8	8.80001e-41	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0342425_26	UniRef90_A0A1W1YQ31	196.0	0	Putative phage-type endonuclease	N/A
eggNOG-mapper	UHGV-0342425_26	1121441.AUCX01000014_gene536	173.0	0	YqaJ-like viral recombinase domain	N/A
Pfam	UHGV-0342425_26	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0342425_26	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0342425_26	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0342425_26	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
Pfam	UHGV-0342425_31	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
KOfam	UHGV-0342425_32	K07497	59.4	8.1e-17	K07497; putative transposase	N/A
PHROG	UHGV-0342425_32	phrog_8463	107.1	1.5e-31	transposase	integration and excision
UniRef90	UHGV-0342425_32	UniRef90_A0A1Q6RLB1	429.0	0	Integrase catalytic domain-containing protein	N/A
eggNOG-mapper	UHGV-0342425_32	1123307.KB904367_gene1244	238.0	0	Transposase and inactivated derivatives	N/A
Pfam	UHGV-0342425_32	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
Pfam	UHGV-0342425_32	PF00665	N/A	N/A	Integrase core domain	rve
Pfam	UHGV-0342425_32	PF13683	N/A	N/A	Integrase core domain	rve_3
COG	UHGV-0342425_32	COG2801	N/A	N/A	Transposase InsO and inactivated derivatives	N/A
structural_annotation	UHGV-0342425_32	PF00665,PF13518,NF033577,COG2801	N/A	N/A	N/A	N/A
KOfam	UHGV-0342425_38	K00986	48.9	0.000000000000089	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0342425_38	phrog_1423	110.1	2.5e-32	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0342425_38	UniRef90_H7BVS8	157.0	2.8026e-45	Reverse transcriptase domain-containing protein	N/A
eggNOG-mapper	UHGV-0342425_38	742722.HMPREF9463_00262	158.0	9.80909e-45	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-0342425_38	drt-UG26	40.7	0.000000000038	DRT	DRT
Pfam	UHGV-0342425_38	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0342425_38	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-0342425_38	TIGR04416	N/A	N/A	N/A	N/A
PHROG	UHGV-0342425_39	phrog_30516	47.2	0.00000000000031	N/A	unknown function
UniRef90	UHGV-0342425_39	UniRef90_A0A6N7VN03	62.4	0.00000000154	Four helix bundle protein	N/A
structural_annotation	UHGV-0342425_39	PF05635,NF008911	N/A	N/A	N/A	N/A
PHROG	UHGV-0342425_41	phrog_37900	67.9	1.5e-21	N/A	unknown function
UniRef90	UHGV-0342425_41	UniRef90_UPI00138EE874	174.0	0	N/A	N/A
eggNOG-mapper	UHGV-0342425_41	931626.Awo_c11420	129.0	4.94e-30	Listeria-Bacteroides repeat domain (List_Bact_rpt)	N/A
Pfam	UHGV-0342425_41	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-0342425_41	COG3209	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0342425_41	PF19789	N/A	N/A	N/A	N/A
KOfam	UHGV-0342425_42	K16628	43.0	0.0000000000013	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0342425_42	phrog_32311	86.7	1.8e-25	N/A	unknown function
UniRef90	UHGV-0342425_42	UniRef90_UPI000E4B80F2	66.2	0.00000000315	collagen-like protein	N/A
eggNOG-mapper	UHGV-0342425_42	33035.JPJF01000093_gene2235	88.6	1.75e-17	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-0342425_42	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
PHROG	UHGV-0342425_43	phrog_6468	62.0	4.5e-18	tail fiber protein; host specificity	tail
eggNOG-mapper	UHGV-0342425_43	272623.L77514	68.2	0.000000000408	N/A	N/A
PHROG	UHGV-0342425_44	phrog_3287	42.0	0.0000000000014	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0342425_44	1232449.BAHV02000016_gene1816	184.0	0	N/A	N/A
structural_annotation	UHGV-0342425_44	PF11134,TIGR04312,COG3823	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0342425_45	PF20387,NF038128,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0342425_46	phrog_371	72.9	3.6e-21	major head protein	head and packaging
eggNOG-mapper	UHGV-0342425_46	1226322.HMPREF1545_03848	134.0	8.24e-34	N/A	N/A
structural_annotation	UHGV-0342425_46	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0342425_47	phrog_24113	85.8	3.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-0342425_47	1226322.HMPREF1545_03847	70.5	0.000000000000137	N/A	N/A
structural_annotation	UHGV-0342425_47	PF11133,COG5471	N/A	N/A	N/A	N/A
KOfam	UHGV-0342425_51	K04771	63.5	3.8e-18	degP, htrA; serine protease Do [EC:3.4.21.107]	N/A
eggNOG-mapper	UHGV-0342425_51	270374.MELB17_07439	66.6	0.00000000638	Belongs to the peptidase S1C family	N/A
PADLOC	UHGV-0342425_51	retron_XI	52.1	0.000000000000013	single gene	Retron
Pfam	UHGV-0342425_51	PF13365	N/A	N/A	Trypsin-like peptidase domain	Trypsin_2
COG	UHGV-0342425_51	COG0265	N/A	N/A	Periplasmic serine protease, S1-C subfamily, contain C-terminal PDZ domain	N/A
eggNOG-mapper	UHGV-0342425_52	748224.HMPREF9436_01406	58.2	0.00000746	N/A	N/A