UHGV-0345745 (vOTU-104147)

Viral Genome: UHGV-0345745

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0345745
vOTU ID	vOTU-104147
Representative Genome?	Yes
Source	mMGE
Original Genome ID	k141_4415_round347~1843055
Associated Biosample	SAMN06909397
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	60.05 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	11
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9667
Viral Hallmark Genes (geNomad)	5
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	35.67
Jumbo Phage?	No

Genome Content
Length (bps)	25,299
GC Content	31.01%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	42
CDS Density	94%
Average CDS Length (bps)	565.64
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 60.05)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0345745_1	546270.GEMHA0001_1439	1312.0	0	N/A	N/A
KOfam	UHGV-0345745_2	K14059	174.5	0	int; integrase	N/A
PHROG	UHGV-0345745_2	phrog_1	191.4	0	integrase	integration and excision
UniRef90	UHGV-0345745_2	UniRef90_A0A7Z0LH74	335.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0345745_2	562981.HMPREF0428_01865	328.0	0	Phage integrase family	N/A
Pfam	UHGV-0345745_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0345745_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0345745_2	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0345745_3	phrog_806	81.3	1.4e-23	N/A	unknown function
UniRef90	UHGV-0345745_3	UniRef90_UPI001248F911	130.0	1.87e-35	N/A	N/A
eggNOG-mapper	UHGV-0345745_3	1214184.ALKY01000006_gene200	128.0	2.77e-35	N/A	N/A
structural_annotation	UHGV-0345745_3	PF16729,MF_00791,TIGR04087,COG2967	N/A	N/A	N/A	N/A
KOfam	UHGV-0345745_4	K01356	159.3	0	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0345745_4	phrog_4	141.1	9.00054e-42	transcriptional repressor	transcription regulation
UniRef90	UHGV-0345745_4	UniRef90_A0A2N6SEH2	319.0	0	Repressor LexA	N/A
eggNOG-mapper	UHGV-0345745_4	562981.HMPREF0428_01863	221.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0345745_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0345745_4	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0345745_4	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0345745_4	PF00717,PF01381,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0345745_5	UniRef90_UPI000E0C8486	108.0	9.59e-30	toxin-antitoxin system, antitoxin component, Xre family protein	N/A
Pfam	UHGV-0345745_5	PF05339	N/A	N/A	N/A	DUF739
structural_annotation	UHGV-0345745_5	PF21291,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0345745_7	phrog_3634	194.9	0	N/A	unknown function
UniRef90	UHGV-0345745_7	UniRef90_A0A174AIN4	119.0	1.61e-29	Nucleoside 2-deoxyribosyltransferase	N/A
eggNOG-mapper	UHGV-0345745_7	1289598.M1PL51_9CAUD	126.0	2.64e-33	N/A	N/A
PADLOC	UHGV-0345745_7	Effector_00071	66.5	4.4e-19	TIR	CBASS
structural_annotation	UHGV-0345745_7	PF10137,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0345745_9	phrog_10400	58.2	7.1e-17	N/A	unknown function
UniRef90	UHGV-0345745_11	UniRef90_A0A134A0C2	102.0	2.16e-27	AGC-kinase C-terminal domain-containing protein	N/A
UniRef90	UHGV-0345745_12	UniRef90_A0A6H1F1I0	62.8	0.0000000000304	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0345745_12	562981.HMPREF0428_01011	62.4	0.00000000013	dUTPase	N/A
COG	UHGV-0345745_12	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
KOfam	UHGV-0345745_14	K01520	75.2	9.9e-22	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0345745_14	phrog_135	95.5	5e-28	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0345745_14	UniRef90_UPI00195646D9	290.0	0	dUTPase	N/A
eggNOG-mapper	UHGV-0345745_14	562981.HMPREF0428_01011	133.0	8.36e-37	dUTPase	N/A
Pfam	UHGV-0345745_14	PF00692	N/A	N/A	dUTPase	dUTPase
COG	UHGV-0345745_14	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0345745_14	PF00692,MF_00116,NF010561,COG0756	N/A	N/A	N/A	N/A
UniRef90	UHGV-0345745_15	UniRef90_UPI0019595D10	94.7	8.2e-22	N/A	N/A
PHROG	UHGV-0345745_18	phrog_22695	69.0	8.1e-20	N/A	unknown function
UniRef90	UHGV-0345745_18	UniRef90_A0A542AIW8	55.1	0.00000266	Ribonuclease E	N/A
eggNOG-mapper	UHGV-0345745_18	1385512.N784_13425	69.3	0.00000000000086	N/A	N/A
PHROG	UHGV-0345745_19	phrog_69	310.5	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0345745_19	UniRef90_UPI00195B61AB	766.0	0	N/A	N/A
eggNOG-mapper	UHGV-0345745_19	1235799.C818_04197	387.0	0	N/A	N/A
Pfam	UHGV-0345745_19	PF10926	N/A	N/A	N/A	DUF2800
COG	UHGV-0345745_19	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0345745_19	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0345745_20	phrog_112	173.9	0	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0345745_20	UniRef90_UPI00195C34C5	412.0	0	N/A	N/A
eggNOG-mapper	UHGV-0345745_20	1449126.JQKL01000006_gene839	207.0	0	N/A	N/A
Pfam	UHGV-0345745_20	PF10991	N/A	N/A	Enterobacter phage Enc34, ssDNA-binding protein	Enc34_ssDNA-bd
structural_annotation	UHGV-0345745_20	PF10991,MF_04153,NF005241	N/A	N/A	N/A	N/A
KOfam	UHGV-0345745_21	K02334	840.4	0	dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]	N/A
PHROG	UHGV-0345745_21	phrog_17	378.1	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0345745_21	UniRef90_UPI0019577E0B	1305.0	0	DNA polymerase	N/A
eggNOG-mapper	UHGV-0345745_21	1235799.C818_04199	805.0	0	DNA polymerase A domain	N/A
Pfam	UHGV-0345745_21	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
COG	UHGV-0345745_21	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
structural_annotation	UHGV-0345745_21	PF00476,MF_04101,NF011540,COG0749	N/A	N/A	N/A	N/A
PHROG	UHGV-0345745_22	phrog_256	980.4	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0345745_22	UniRef90_UPI001956D8B3	1590.0	0	virulence-associated E family protein	N/A
eggNOG-mapper	UHGV-0345745_22	1235799.C818_04200	862.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-0345745_22	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-0345745_22	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-0345745_22	PF05272,MF_04000,NF005477,NF040562,COG5545	N/A	N/A	N/A	N/A
PHROG	UHGV-0345745_23	phrog_93	66.6	3.9e-19	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0345745_23	UniRef90_A0A2X4N3Y7	165.0	0	VRR-NUC domain	N/A
eggNOG-mapper	UHGV-0345745_23	1122146.AUHP01000010_gene1025	74.3	3.96e-16	VRR_NUC	N/A
structural_annotation	UHGV-0345745_23	PF01974,MF_01490,NF011269	N/A	N/A	N/A	N/A
KOfam	UHGV-0345745_24	K14440	129.1	1.6e-38	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-0345745_24	phrog_62	406.2	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0345745_24	UniRef90_A0A2X4N6J8	884.0	0	DNA methylase	N/A
eggNOG-mapper	UHGV-0345745_24	1235799.C818_04202	606.0	0	SNF2 family N-terminal domain	N/A
PADLOC	UHGV-0345745_24	ZorD1_00007	85.5	6.4e-25	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0345745_24	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0345745_24	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0345745_24	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0345745_24	PF13872,PF16203,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
KOfam	UHGV-0345745_25	K07727	43.4	0.000000000008	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-0345745_25	UniRef90_A0A2X4N3T8	72.8	9.88e-16	Predicted transcriptional regulator	N/A
eggNOG-mapper	UHGV-0345745_25	1450525.JATV01000002_gene1957	50.8	0.000000815	N/A	N/A
Pfam	UHGV-0345745_25	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0345745_25	COG3620	N/A	N/A	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	N/A
structural_annotation	UHGV-0345745_25	PF01381,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0345745_29	TIGR02338	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0345745_30	TIGR02338	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0345745_31	PF10957	N/A	N/A	N/A	N/A
PHROG	UHGV-0345745_32	phrog_1691	78.9	4.5e-23	N/A	unknown function
UniRef90	UHGV-0345745_34	UniRef90_UPI000403EAB4	65.9	0.00000000000249	N/A	N/A
UniRef90	UHGV-0345745_36	UniRef90_UPI001A470AE5	159.0	0	med21 domain-containing protein	N/A
eggNOG-mapper	UHGV-0345745_36	562981.HMPREF0428_01830	146.0	1.52041e-42	N/A	N/A
PHROG	UHGV-0345745_39	phrog_36	48.2	0.0000000000002	transcriptional regulator	transcription regulation
UniRef90	UHGV-0345745_39	UniRef90_A0A533I0C4	99.0	1.57e-23	N/A	N/A
eggNOG-mapper	UHGV-0345745_39	1211035.CD30_08135	58.2	0.0000000123	N/A	N/A
Pfam	UHGV-0345745_39	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-0345745_39	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0345745_39	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-0345745_40	phrog_309	182.4	0	terminase small subunit	head and packaging
UniRef90	UHGV-0345745_40	UniRef90_UPI000660E3E0	200.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0345745_40	413066.A1EAE0_9CAUD	174.0	0	endonuclease activity	N/A
structural_annotation	UHGV-0345745_40	PF07141	N/A	N/A	N/A	N/A
KOfam	UHGV-0345745_41	K06909	81.6	1.1e-23	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0345745_41	phrog_2	65.3	1.4e-18	terminase large subunit	head and packaging
UniRef90	UHGV-0345745_41	UniRef90_UPI0019579379	937.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-0345745_41	1123315.AUIP01000003_gene234	696.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0345745_41	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0345745_41	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0345745_41	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0345745_42	phrog_64	360.4	0	portal protein	head and packaging
UniRef90	UHGV-0345745_42	UniRef90_UPI0019562DC3	805.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0345745_42	1123302.KB904182_gene75	531.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-0345745_42	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0345745_42	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0345745_42	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A