UHGV-0354415 (vOTU-050992)

Viral Genome: UHGV-0354415

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0354415
vOTU ID	vOTU-050992
Representative Genome?	Yes
Source	mMGE
Original Genome ID	k119_186019_round8-12~3180928
Associated Biosample	SAMEA3506760
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	30
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9735
Viral Hallmark Genes (geNomad)	10
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	29.33
Jumbo Phage?	No

Genome Content
Length (bps)	56,918
GC Content	39.99%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	79
CDS Density	92%
Average CDS Length (bps)	663.68
Total tRNA Genes	2
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0354415_3	K02319	50.5	0.000000000000017	pol; DNA polymerase, archaea type [EC:2.7.7.7]	N/A
PHROG	UHGV-0354415_3	phrog_4210	2115.5	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0354415_3	UniRef90_G9RWJ6	2087.0	0	SF3 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-0354415_3	428125.CLOLEP_01375	2089.0	0	DNA polymerase type-B family	N/A
Pfam	UHGV-0354415_3	PF19263	N/A	N/A	N/A	DUF5906
structural_annotation	UHGV-0354415_3	PF00136,PF05272,PF10991,PF09250,MF_04100,MF_00016,NF011296,TIGR00592,COG3378,COG0417	N/A	N/A	N/A	N/A
PHROG	UHGV-0354415_4	phrog_4678	197.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0354415_4	742740.HMPREF9474_02306	216.0	0	N/A	N/A
PHROG	UHGV-0354415_5	phrog_4695	156.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0354415_5	665950.HMPREF1025_01953	143.0	1.63e-40	N/A	N/A
UniRef90	UHGV-0354415_6	UniRef90_UPI00156FB19E	64.3	0.00000000000576	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-0354415_6	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0354415_7	phrog_2152	322.6	0	N/A	unknown function
UniRef90	UHGV-0354415_7	UniRef90_UPI00156DA7B3	341.0	0	N/A	N/A
eggNOG-mapper	UHGV-0354415_7	478749.BRYFOR_08565	325.0	0	N/A	N/A
Pfam	UHGV-0354415_7	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0354415_7	PF19880	N/A	N/A	N/A	N/A
KOfam	UHGV-0354415_8	K00942	76.9	3.1e-22	gmk, GUK1; guanylate kinase [EC:2.7.4.8]	N/A
PHROG	UHGV-0354415_8	phrog_1815	144.6	7.20267e-43	guanylate kinase	other
UniRef90	UHGV-0354415_8	UniRef90_A0A350TI94	142.0	4.07e-40	GuKc domain-containing protein	N/A
eggNOG-mapper	UHGV-0354415_8	431943.CKL_2842	107.0	4.41e-27	Guanylate kinase	N/A
Pfam	UHGV-0354415_8	PF00625	N/A	N/A	Guanylate kinase	Guanylate_kin
COG	UHGV-0354415_8	COG0194	N/A	N/A	Guanylate kinase	N/A
structural_annotation	UHGV-0354415_8	PF00625,MF_00328,TIGR03263,COG0194	N/A	N/A	N/A	N/A
PHROG	UHGV-0354415_9	phrog_4079	206.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0354415_9	742740.HMPREF9474_02312	183.0	0	N/A	N/A
PHROG	UHGV-0354415_11	phrog_2152	259.3	0	N/A	unknown function
UniRef90	UHGV-0354415_11	UniRef90_UPI0018AC0B4C	292.0	0	N/A	N/A
eggNOG-mapper	UHGV-0354415_11	742740.HMPREF9474_02314	287.0	0	N/A	N/A
Pfam	UHGV-0354415_11	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0354415_11	PF19880	N/A	N/A	N/A	N/A
PHROG	UHGV-0354415_13	phrog_2152	226.5	0	N/A	unknown function
UniRef90	UHGV-0354415_13	UniRef90_UPI001956236B	279.0	0	N/A	N/A
eggNOG-mapper	UHGV-0354415_13	428125.CLOLEP_01358	290.0	0	N/A	N/A
Pfam	UHGV-0354415_13	PF19880	N/A	N/A	N/A	DUF6353
structural_annotation	UHGV-0354415_13	PF19880	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0354415_16	515622.bpr_IV105	59.3	0.000000000951	N/A	N/A
structural_annotation	UHGV-0354415_16	TIGR01206,COG1996	N/A	N/A	N/A	N/A
PHROG	UHGV-0354415_18	phrog_17256	227.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0354415_18	428125.CLOLEP_01353	203.0	0	N/A	N/A
PHROG	UHGV-0354415_19	phrog_15866	45.6	0.00000000000096	N/A	unknown function
PHROG	UHGV-0354415_23	phrog_11237	170.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0354415_23	742733.HMPREF9469_05093	165.0	0	N/A	N/A
PHROG	UHGV-0354415_24	phrog_6058	78.5	4.7e-23	N/A	unknown function
UniRef90	UHGV-0354415_24	UniRef90_A0A4Q7P3C7	134.0	1.13e-39	Prolyl-tRNA synthetase	N/A
eggNOG-mapper	UHGV-0354415_24	742733.HMPREF9469_05094	133.0	7.74999e-40	N/A	N/A
KOfam	UHGV-0354415_25	K14059	94.8	1.3e-27	int; integrase	N/A
PHROG	UHGV-0354415_25	phrog_1	137.4	1.2e-40	integrase	integration and excision
UniRef90	UHGV-0354415_25	UniRef90_A0A3A9IN41	634.0	0	Zinc-ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-0354415_25	428125.CLOLEP_01345	612.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0354415_25	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0354415_25	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0354415_25	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0354415_25	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0354415_27	phrog_1129	76.7	1.9e-22	holin	lysis
UniRef90	UHGV-0354415_27	UniRef90_A0A417FQ49	133.0	1.07e-38	Holin	N/A
eggNOG-mapper	UHGV-0354415_27	478749.BRYFOR_08506	130.0	1.7e-38	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0354415_27	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0354415_27	PF06946	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0354415_28	1437603.BMON_1127	90.5	1.04e-16	N/A	N/A
PHROG	UHGV-0354415_29	phrog_10693	54.6	0.0000000000000013	host range and adsorption protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0354415_29	UniRef90_A0A1M6RH29	309.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0354415_29	1504823.CCMM01000008_gene1029	191.0	0	N/A	N/A
structural_annotation	UHGV-0354415_29	PF14874,NF038186	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0354415_30	1392487.JIAD01000001_gene510	127.0	2.4e-29	N/A	N/A
structural_annotation	UHGV-0354415_30	PF01455,NF003076	N/A	N/A	N/A	N/A
PHROG	UHGV-0354415_31	phrog_26795	58.0	2.2e-17	N/A	unknown function
UniRef90	UHGV-0354415_31	UniRef90_UPI001C38532D	502.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0354415_31	478749.BRYFOR_08511	494.0	0	N/A	N/A
structural_annotation	UHGV-0354415_31	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
KOfam	UHGV-0354415_32	K24485	45.1	0.0000000000004	FNDC3; fibronectin type III domain-containing protein 3	N/A
UniRef90	UHGV-0354415_32	UniRef90_C6LIN2	834.0	0	Fibronectin type III domain protein	N/A
eggNOG-mapper	UHGV-0354415_32	478749.BRYFOR_08512	834.0	0	Fibronectin type 3 domain	N/A
Pfam	UHGV-0354415_32	PF16656	N/A	N/A	Purple acid Phosphatase, N-terminal domain	Pur_ac_phosph_N
structural_annotation	UHGV-0354415_32	PF06995,PF02010,PF18001,MF_04116,NF010681,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0354415_33	phrog_4372	565.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0354415_33	UniRef90_A0A1Y4SMI2	1107.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0354415_33	478749.BRYFOR_08513	548.0	0	Peptidoglycan-binding domain 1 protein	N/A
Pfam	UHGV-0354415_33	PF20155	N/A	N/A	Tape measure protein	TMP_3
Pfam	UHGV-0354415_33	PF08230	N/A	N/A	CW_7 repeat	CW_7
NCBIFam	UHGV-0354415_33	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0354415_33	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
UniRef90	UHGV-0354415_34	UniRef90_A0A3A9JBQ1	199.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0354415_34	742740.HMPREF9474_02263	200.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0354415_34	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0354415_34	PF17395,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0354415_35	phrog_4338	262.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0354415_35	411460.RUMTOR_01339	237.0	0	N/A	N/A
PHROG	UHGV-0354415_36	phrog_4282	173.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0354415_36	478749.BRYFOR_08517	137.0	3.24e-39	N/A	N/A
PHROG	UHGV-0354415_37	phrog_2645	350.0	0	major tail protein	tail
UniRef90	UHGV-0354415_37	UniRef90_A0A2U8UI58	298.0	0	Major tail protein	N/A
eggNOG-mapper	UHGV-0354415_37	742740.HMPREF9474_02267	320.0	0	N/A	N/A
structural_annotation	UHGV-0354415_37	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0354415_38	478749.BRYFOR_08519	134.0	1.04e-39	N/A	N/A
structural_annotation	UHGV-0354415_38	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0354415_39	phrog_4270	141.2	1.99965e-42	N/A	unknown function
eggNOG-mapper	UHGV-0354415_39	428125.CLOLEP_01413	162.0	0	N/A	N/A
structural_annotation	UHGV-0354415_39	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
KOfam	UHGV-0354415_41	K06904	68.6	9.1e-20	N/A	N/A
PHROG	UHGV-0354415_41	phrog_3270	798.6	0	head maturation protease	head and packaging
UniRef90	UHGV-0354415_41	UniRef90_D4N0R6	769.0	0	Phage capsid family./Caudovirus prohead protease	N/A
eggNOG-mapper	UHGV-0354415_41	691965.D4P7D6_9CAUD	538.0	0	peptidase activity	N/A
Pfam	UHGV-0354415_41	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
Pfam	UHGV-0354415_41	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
structural_annotation	UHGV-0354415_41	PF04586,PF06673,TIGR01543,TIGR01554,COG3740,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0354415_42	phrog_12	118.7	3.5e-35	portal protein	head and packaging
UniRef90	UHGV-0354415_42	UniRef90_A0A174YU68	631.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0354415_42	411460.RUMTOR_01348	621.0	0	Phage portal protein	N/A
Pfam	UHGV-0354415_42	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-0354415_42	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0354415_43	PF12083	N/A	N/A	N/A	N/A
PHROG	UHGV-0354415_44	phrog_9	240.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0354415_44	UniRef90_UPI00156DFE91	1033.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0354415_44	428125.CLOLEP_01409	1009.0	0	Phage Terminase	N/A
Pfam	UHGV-0354415_44	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0354415_44	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0354415_44	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0354415_45	phrog_7021	79.0	7.4e-23	N/A	unknown function
eggNOG-mapper	UHGV-0354415_45	665956.HMPREF1032_00671	73.2	0.0000000000000998	N/A	N/A
PHROG	UHGV-0354415_46	phrog_4247	175.8	0	virion structural protein	head and packaging
UniRef90	UHGV-0354415_46	UniRef90_A0A373C8E1	153.0	2.8026e-45	Structural protein	N/A
eggNOG-mapper	UHGV-0354415_46	665950.HMPREF1025_01991	159.0	0	N/A	N/A
PHROG	UHGV-0354415_47	phrog_4321	207.4	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0354415_47	742733.HMPREF9469_05036	202.0	0	N/A	N/A
PHROG	UHGV-0354415_48	phrog_4259	158.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0354415_48	742740.HMPREF9474_02276	139.0	9.89036e-42	N/A	N/A
KOfam	UHGV-0354415_49	K01185	158.5	0	E3.2.1.17; lysozyme [EC:3.2.1.17]	N/A
PHROG	UHGV-0354415_49	phrog_7	184.2	0	endolysin	lysis
UniRef90	UHGV-0354415_49	UniRef90_UPI000831DC87	154.0	9.90998e-41	glycoside hydrolase family protein	N/A
eggNOG-mapper	UHGV-0354415_49	106648.BBLJ01000070_gene4317	148.0	6.54e-41	Phage lysozyme	N/A
Pfam	UHGV-0354415_49	PF00959	N/A	N/A	Phage lysozyme	Phage_lysozyme
Pfam	UHGV-0354415_49	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0354415_49	COG3772	N/A	N/A	Phage-related lysozyme (muramidase), GH24 family	N/A
HAMAP	UHGV-0354415_49	MF_04110	N/A	N/A	Endolysin	N/A
structural_annotation	UHGV-0354415_49	PF01471,PF00959,MF_04110,COG3772,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0354415_50	phrog_4303	109.3	1.5e-32	N/A	unknown function
eggNOG-mapper	UHGV-0354415_50	428125.CLOLEP_01401	112.0	1.9e-31	N/A	N/A
PHROG	UHGV-0354415_51	phrog_4291	974.5	0	RNA-dependent RNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0354415_51	UniRef90_C6LIQ4	1329.0	0	Putative phage tail component domain protein	N/A
eggNOG-mapper	UHGV-0354415_51	478749.BRYFOR_08534	1329.0	0	N/A	N/A
Pfam	UHGV-0354415_51	PF04218	N/A	N/A	CENP-B N-terminal DNA-binding domain	CENP-B_N
Pfam	UHGV-0354415_51	PF13936	N/A	N/A	Helix-turn-helix domain	HTH_38
structural_annotation	UHGV-0354415_51	PF05183	N/A	N/A	N/A	N/A
PHROG	UHGV-0354415_52	phrog_3953	183.4	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0354415_52	UniRef90_A0A374JNL3	275.0	0	N/A	N/A
eggNOG-mapper	UHGV-0354415_52	478749.BRYFOR_08535	278.0	0	N/A	N/A
Pfam	UHGV-0354415_52	PF10926	N/A	N/A	N/A	DUF2800
structural_annotation	UHGV-0354415_52	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0354415_53	742740.HMPREF9474_02280	133.0	2.27e-39	N/A	N/A
structural_annotation	UHGV-0354415_53	PF01870,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0354415_56	phrog_6466	112.7	1.4e-33	DNA ligase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0354415_56	UniRef90_H1CCJ0	102.0	8.34e-26	DNA_ligase_aden domain-containing protein	N/A
eggNOG-mapper	UHGV-0354415_56	720555.BATR1942_09670	93.2	3.35e-23	NAD-dependent DNA ligase adenylation domain	N/A
COG	UHGV-0354415_56	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
structural_annotation	UHGV-0354415_62	PF08863,MF_01326_A,NF033216	N/A	N/A	N/A	N/A
PHROG	UHGV-0354415_64	phrog_6721	313.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0354415_64	665956.HMPREF1032_00655	342.0	0	N/A	N/A
structural_annotation	UHGV-0354415_64	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0354415_67	phrog_229	104.4	1.2e-30	MazG-like pyrophosphatase	other
UniRef90	UHGV-0354415_67	UniRef90_UPI00189C4F21	167.0	0	nucleoside triphosphate pyrophosphohydrolase family protein	N/A
eggNOG-mapper	UHGV-0354415_67	411473.RUMCAL_00277	146.0	4.48416e-44	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-0354415_67	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-0354415_67	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-0354415_67	PF03819,MF_01020,NF001613,COG0140	N/A	N/A	N/A	N/A
UniRef90	UHGV-0354415_68	UniRef90_A0A7X9Q842	201.0	0	Leucine-rich repeat domain-containing protein (Fragment)	N/A
PHROG	UHGV-0354415_69	phrog_19852	68.4	5.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-0354415_69	742740.HMPREF9474_02297	62.4	0.0000000000123	N/A	N/A
PHROG	UHGV-0354415_72	phrog_62	142.4	2.59941e-42	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0354415_72	UniRef90_D4N0N4	619.0	0	NAD-dependent DNA ligase (Contains BRCT domain type II)	N/A
eggNOG-mapper	UHGV-0354415_72	742733.HMPREF9469_05062	605.0	0	Helicase conserved C-terminal domain	N/A
COG	UHGV-0354415_72	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0354415_72	PF02399,MF_01821,NF038318,COG0553	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0354415_73	PF11623,MF_00613,NF002745,COG1862	N/A	N/A	N/A	N/A
PHROG	UHGV-0354415_78	phrog_4787	182.3	0	single strand annealing protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0354415_78	478749.BRYFOR_08559	196.0	0	N/A	N/A
structural_annotation	UHGV-0354415_78	PF21265,MF_04153	N/A	N/A	N/A	N/A