UHGV-0355737 (vOTU-051015)

Viral Genome: UHGV-0355737

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0355737
vOTU ID	vOTU-051015
Representative Genome?	Yes
Source	mMGE
Original Genome ID	k141_76722_round1256~5637817
Associated Biosample	SAMN10285304
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	13
CheckV Host Markers	2
Recoded?	No

Viral Content
geNomad score	0.9818
Viral Hallmark Genes (geNomad)	13
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	16.91
Jumbo Phage?	No

Genome Content
Length (bps)	37,374
GC Content	58.42%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	62
CDS Density	91%
Average CDS Length (bps)	548.32
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0355737_1	1378168.N510_03079	64.7	0.000000000321	N/A	N/A
KOfam	UHGV-0355737_2	K14059	104.3	2e-30	int; integrase	N/A
PHROG	UHGV-0355737_2	phrog_1	131.8	7.4e-39	integrase	integration and excision
UniRef90	UHGV-0355737_2	UniRef90_G4L0W3	491.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0355737_2	693746.OBV_43340	491.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0355737_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0355737_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0355737_2	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0355737_3	UniRef90_UPI001BC112C2	52.0	0.00000439	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0355737_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0355737_3	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
structural_annotation	UHGV-0355737_3	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0355737_4	UniRef90_UPI001956EF77	157.0	0	stalk domain-containing protein	N/A
eggNOG-mapper	UHGV-0355737_4	1226322.HMPREF1545_01476	122.0	5.87e-33	Copper amine oxidase N-terminal domain	N/A
Pfam	UHGV-0355737_4	PF07833	N/A	N/A	Copper amine oxidase N-terminal domain	Cu_amine_oxidN1
UniRef90	UHGV-0355737_6	UniRef90_UPI001E54DE4F	89.4	4.6e-21	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0355737_6	1226322.HMPREF1545_00148	79.7	7.41e-18	Transcriptional	N/A
COG	UHGV-0355737_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0355737_6	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0355737_7	K07729	64.1	3.3e-18	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0355737_7	phrog_8	51.6	0.000000000000023	transcriptional regulator	transcription regulation
UniRef90	UHGV-0355737_7	UniRef90_UPI00030EB95F	70.5	0.0000000000000114	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0355737_7	1007096.BAGW01000011_gene2356	70.5	0.00000000000000192	sequence-specific DNA binding	N/A
Pfam	UHGV-0355737_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0355737_7	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0355737_7	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0355737_8	1235835.C814_03153	80.1	3.69e-19	N/A	N/A
structural_annotation	UHGV-0355737_8	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0355737_9	phrog_6499	136.3	8.30003e-41	transcriptional regulator	transcription regulation
UniRef90	UHGV-0355737_9	UniRef90_UPI001C01DF91	136.0	5.29e-37	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0355737_9	1226322.HMPREF1545_00092	120.0	8.32e-32	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0355737_9	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0355737_9	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-0355737_9	PF01381,NF040522,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0355737_10	phrog_270	93.3	3.9e-27	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0355737_10	UniRef90_UPI001ADEF5BC	186.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0355737_10	742738.HMPREF9460_00851	172.0	0	Helix-turn-helix domain	N/A
Pfam	UHGV-0355737_10	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0355737_10	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0355737_10	PF04182,NF040939,COG3355	N/A	N/A	N/A	N/A
KOfam	UHGV-0355737_11	K02314	349.7	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0355737_11	phrog_19	280.5	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0355737_11	UniRef90_UPI00195742C3	279.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0355737_11	742738.HMPREF9460_00852	251.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0355737_11	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0355737_11	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0355737_11	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0355737_11	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
KOfam	UHGV-0355737_13	K03496	170.6	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0355737_13	phrog_164	146.4	2.20004e-43	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0355737_13	UniRef90_UPI001C0253FB	345.0	0	ParA family protein	N/A
eggNOG-mapper	UHGV-0355737_13	1007096.BAGW01000033_gene1614	256.0	0	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	N/A
Pfam	UHGV-0355737_13	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0355737_13	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0355737_13	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-0355737_14	K03497	85.2	1.4e-24	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0355737_14	phrog_27290	113.8	3.9e-36	N/A	unknown function
UniRef90	UHGV-0355737_14	UniRef90_A0A7X3DIE8	209.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0355737_14	999413.HMPREF1094_03492	70.9	0.0000000000664	ParB-like nuclease domain	N/A
Pfam	UHGV-0355737_14	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0355737_14	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0355737_14	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0355737_17	K00558	40.6	0.000000000019	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0355737_17	phrog_757	118.0	6e-35	DNA methyltransferase	other
UniRef90	UHGV-0355737_17	UniRef90_A0A8D9PDD1	406.0	0	DNA (Cytosine 5) methyltransferase	N/A
eggNOG-mapper	UHGV-0355737_17	622312.ROSEINA2194_01264	366.0	0	C-5 cytosine-specific DNA methylase	N/A
COG	UHGV-0355737_17	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0355737_17	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0355737_18	PF06657	N/A	N/A	N/A	N/A
PHROG	UHGV-0355737_19	phrog_38832	61.6	1e-19	N/A	unknown function
eggNOG-mapper	UHGV-0355737_19	665956.HMPREF1032_00143	67.0	0.00000000000958	N/A	N/A
structural_annotation	UHGV-0355737_19	PF10781	N/A	N/A	N/A	N/A
Pfam	UHGV-0355737_20	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0355737_20	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
PHROG	UHGV-0355737_25	phrog_3584	75.2	8.7e-22	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0355737_25	693746.OBV_19950	318.0	0	N/A	N/A
structural_annotation	UHGV-0355737_25	PF05840	N/A	N/A	N/A	N/A
PHROG	UHGV-0355737_26	phrog_119	81.5	1.1e-23	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0355737_26	UniRef90_G9YSB5	152.0	1.4013e-45	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0355737_26	926561.KB900623_gene763	84.7	1.31e-19	HNH nucleases	N/A
Pfam	UHGV-0355737_26	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0355737_26	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0355737_27	phrog_5110	55.7	7e-16	terminase small subunit	head and packaging
UniRef90	UHGV-0355737_27	UniRef90_UPI00195E8788	127.0	8.16e-36	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0355737_27	202752.JL53_00755	49.3	0.00000593	Phage terminase, small subunit	N/A
Pfam	UHGV-0355737_27	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0355737_27	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0355737_28	phrog_9	250.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0355737_28	UniRef90_A0A6I7GGF0	953.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0355737_28	1235792.C808_00083	633.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0355737_28	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0355737_28	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0355737_28	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0355737_29	phrog_12	102.0	3.8e-30	portal protein	head and packaging
UniRef90	UHGV-0355737_29	UniRef90_G9YSB8	542.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0355737_29	610130.Closa_0742	295.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0355737_29	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0355737_29	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0355737_29	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0355737_30	K01358	136.9	2e-40	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0355737_30	phrog_94	247.9	0	head maturation protease	head and packaging
UniRef90	UHGV-0355737_30	UniRef90_A0A1Y4BT12	344.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0355737_30	349161.Dred_2605	269.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0355737_30	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0355737_30	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0355737_30	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0355737_31	phrog_10	152.9	2.8026e-45	major head protein	head and packaging
UniRef90	UHGV-0355737_31	UniRef90_G9YSC0	708.0	0	Cadherin-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0355737_31	1235792.C808_00086	452.0	0	Phage capsid family	N/A
Pfam	UHGV-0355737_31	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0355737_31	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0355737_31	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0355737_31	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0355737_31	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0355737_32	phrog_749	73.4	2.4e-21	N/A	unknown function
eggNOG-mapper	UHGV-0355737_32	1415774.U728_1251	89.4	1.05e-21	N/A	N/A
PHROG	UHGV-0355737_33	phrog_19734	137.2	6.79994e-41	N/A	unknown function
UniRef90	UHGV-0355737_33	UniRef90_A0A6I7GNS7	146.0	8.60397e-43	Phage head closure protein	N/A
eggNOG-mapper	UHGV-0355737_33	349161.Dred_2602	95.9	7.97e-24	N/A	N/A
structural_annotation	UHGV-0355737_33	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0355737_34	999413.HMPREF1094_02005	80.9	1.81e-18	N/A	N/A
structural_annotation	UHGV-0355737_34	PF05657,COG3167	N/A	N/A	N/A	N/A
UniRef90	UHGV-0355737_35	UniRef90_R6UNR2	133.0	1.04e-36	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0355737_35	908340.HMPREF9406_2573	133.0	1.74e-37	N/A	N/A
structural_annotation	UHGV-0355737_35	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0355737_36	phrog_88	98.8	3.7e-29	major tail protein	tail
UniRef90	UHGV-0355737_36	UniRef90_UPI0018771F27	286.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0355737_36	33035.JPJF01000039_gene278	137.0	5.44e-38	N/A	N/A
NCBIFam	UHGV-0355737_36	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0355737_36	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0355737_37	phrog_2115	41.6	0.000000000026	tail protein	tail
eggNOG-mapper	UHGV-0355737_37	596328.HMPREF0578_1238	68.9	0.000000000000402	N/A	N/A
structural_annotation	UHGV-0355737_37	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0355737_39	phrog_6900	249.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0355737_39	UniRef90_A0A373CK98	305.0	0	PblA (Fragment)	N/A
eggNOG-mapper	UHGV-0355737_39	411470.RUMGNA_02076	306.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0355737_39	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0355737_39	COG5280	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0355737_40	1235797.C816_02660	118.0	9.45e-33	N/A	N/A
structural_annotation	UHGV-0355737_40	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0355737_41	phrog_13879	462.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0355737_41	1235797.C816_02659	762.0	0	N/A	N/A
structural_annotation	UHGV-0355737_41	PF14594,PF06588,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0355737_42	phrog_18725	74.5	1.4e-21	N/A	unknown function
eggNOG-mapper	UHGV-0355737_42	1226322.HMPREF1545_00062	110.0	5.54e-29	N/A	N/A
structural_annotation	UHGV-0355737_43	PF21722,PF07210,TIGR04134	N/A	N/A	N/A	N/A
UniRef90	UHGV-0355737_45	UniRef90_A0A845R718	72.8	0.0000000000000159	Branched-chain amino acid ABC transporter permease	N/A
eggNOG-mapper	UHGV-0355737_45	1235835.C814_01206	73.9	9.37e-16	N/A	N/A
PHROG	UHGV-0355737_46	phrog_13256	69.5	3.3e-20	N/A	unknown function
eggNOG-mapper	UHGV-0355737_46	1226322.HMPREF1545_00132	70.9	0.000000000000002	N/A	N/A
PHROG	UHGV-0355737_48	phrog_18955	77.6	1.1e-22	N/A	unknown function
UniRef90	UHGV-0355737_48	UniRef90_UPI00164D2830	373.0	0	phosphodiester glycosidase family protein	N/A
eggNOG-mapper	UHGV-0355737_48	1121381.JNIV01000121_gene904	58.2	0.000000407	LysM domain	N/A
Pfam	UHGV-0355737_48	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
COG	UHGV-0355737_48	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0355737_48	PF09992,COG4632	N/A	N/A	N/A	N/A
KOfam	UHGV-0355737_49	K08640	103.5	3.4e-30	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0355737_49	phrog_894	105.9	4.8e-31	endolysin	lysis
UniRef90	UHGV-0355737_49	UniRef90_K1TJK4	225.0	0	Peptidase_M15_3 domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0355737_49	1235797.C816_04171	204.0	0	Peptidase M15	N/A
Pfam	UHGV-0355737_49	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0355737_49	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0355737_49	PF05951,COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0355737_50	PF04545,MF_00674,NF009179,COG1342	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0355737_52	742738.HMPREF9460_00886	146.0	1.10001e-40	N/A	N/A
Pfam	UHGV-0355737_52	PF18912	N/A	N/A	Double zinc ribbon domain	DZR_2
UniRef90	UHGV-0355737_53	UniRef90_A0A6N3FXW7	148.0	1.12104e-44	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-0355737_53	742738.HMPREF9460_04059	77.8	5.9e-17	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0355737_53	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0355737_53	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0355737_53	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-0355737_54	cluster_39973	36.2	0.0000146	NA	N/A
PHROG	UHGV-0355737_56	phrog_3754	118.0	6.1e-35	N/A	unknown function
eggNOG-mapper	UHGV-0355737_56	1226322.HMPREF1545_00073	174.0	0	N/A	N/A
PHROG	UHGV-0355737_57	phrog_21718	105.9	3.6e-31	N/A	unknown function
eggNOG-mapper	UHGV-0355737_57	397290.C810_05210	74.3	0.0000000000000139	N/A	N/A
PHROG	UHGV-0355737_58	phrog_22984	72.2	6.1e-22	N/A	unknown function
PHROG	UHGV-0355737_59	phrog_16490	141.1	2.90069e-43	N/A	unknown function
eggNOG-mapper	UHGV-0355737_59	1408437.JNJN01000043_gene803	126.0	6.88e-33	N/A	N/A
PHROG	UHGV-0355737_61	phrog_20016	193.5	0	N/A	unknown function
UniRef90	UHGV-0355737_61	UniRef90_A0A285PT46	190.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0355737_61	397290.C810_05214	169.0	0	N/A	N/A
structural_annotation	UHGV-0355737_61	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0355737_62	phrog_28802	48.6	0.0000000000000052	N/A	unknown function
eggNOG-mapper	UHGV-0355737_62	476272.RUMHYD_01772	55.1	0.000000205	N/A	N/A