UHGV-0358448 (vOTU-069169)

Viral Genome: UHGV-0358448

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0358448
vOTU ID	vOTU-069169
Representative Genome?	Yes
Source	mMGE
Original Genome ID	k99_9447_round1256~1602918
Associated Biosample	SAMEA4813978
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	99.9 (High-quality)
Trimmed?	No
CheckV Viral Markers	18
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.977
Viral Hallmark Genes (geNomad)	9
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	23.04
Jumbo Phage?	No

Genome Content
Length (bps)	39,692
GC Content	37.55%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	52
CDS Density	91%
Average CDS Length (bps)	695.25
Total tRNA Genes	1
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0358448_1	K16789	168.7	0	thiT; thiamine transporter	N/A
UniRef90	UHGV-0358448_1	UniRef90_A0A174YY03	416.0	0	Thiamine ECF transporter S component ThiT	N/A
eggNOG-mapper	UHGV-0358448_1	515620.EUBELI_01236	352.0	0	proton-coupled thiamine transporter YuaJ	N/A
Pfam	UHGV-0358448_1	PF09515	N/A	N/A	Thiamine transporter protein (Thia_YuaJ)	Thia_YuaJ
COG	UHGV-0358448_1	COG3859	N/A	N/A	Thiamine transporter ThiT	N/A
KOfam	UHGV-0358448_2	K02395	44.1	0.0000000000021	flgJ; peptidoglycan hydrolase FlgJ	N/A
PHROG	UHGV-0358448_2	phrog_3513	55.5	5.9e-16	endolysin	lysis
UniRef90	UHGV-0358448_2	UniRef90_R5ZWS5	554.0	0	Peptidoglycan hydrolase	N/A
eggNOG-mapper	UHGV-0358448_2	1139996.OMQ_00128	58.9	0.000000874	defense response to other organism	N/A
Pfam	UHGV-0358448_2	PF01832	N/A	N/A	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
Pfam	UHGV-0358448_2	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-0358448_2	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0358448_2	PF08230,NF004974,COG1705	N/A	N/A	N/A	N/A
PHROG	UHGV-0358448_3	phrog_199	74.1	1.6e-21	holin	lysis
UniRef90	UHGV-0358448_3	UniRef90_A0A3B8UJ75	239.0	0	Holin	N/A
eggNOG-mapper	UHGV-0358448_3	483218.BACPEC_01140	218.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0358448_3	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0358448_3	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0358448_3	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0358448_3	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0358448_6	phrog_2566	45.8	0.00000000000096	N/A	unknown function
PHROG	UHGV-0358448_7	phrog_6616	164.4	0	tail protein	tail
UniRef90	UHGV-0358448_7	UniRef90_A0A8D9PGP3	751.0	0	Minor structural protein	N/A
eggNOG-mapper	UHGV-0358448_7	1232453.BAIF02000058_gene1641	270.0	0	Phage minor structural protein	N/A
COG	UHGV-0358448_7	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0358448_7	PF16466,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0358448_8	phrog_1401	65.5	8.2e-19	N/A	unknown function
UniRef90	UHGV-0358448_8	UniRef90_UPI0007099B7A	69.7	0.00000000000123	N/A	N/A
eggNOG-mapper	UHGV-0358448_8	1294142.CINTURNW_1705	60.8	0.000000000553	N/A	N/A
structural_annotation	UHGV-0358448_8	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0358448_9	phrog_1194	82.4	4.7e-24	N/A	unknown function
eggNOG-mapper	UHGV-0358448_9	33035.JPJF01000093_gene2242	155.0	0	N/A	N/A
structural_annotation	UHGV-0358448_9	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0358448_10	phrog_1535	227.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0358448_10	UniRef90_A0A1C5PIN9	379.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0358448_10	33035.JPJF01000093_gene2243	330.0	0	phage tail tape measure protein	N/A
COG	UHGV-0358448_10	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0358448_10	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0358448_11	phrog_8355	87.4	8e-26	N/A	unknown function
UniRef90	UHGV-0358448_11	UniRef90_UPI0006BBA9AA	111.0	4.31e-30	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0358448_11	1151292.QEW_2424	106.0	1.24e-29	N/A	N/A
PHROG	UHGV-0358448_12	phrog_8300	67.4	1.9e-19	N/A	unknown function
eggNOG-mapper	UHGV-0358448_12	1151292.QEW_2425	60.8	0.000000000154	N/A	N/A
structural_annotation	UHGV-0358448_12	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-0358448_13	phrog_820	118.0	5.5e-35	major tail protein	tail
UniRef90	UHGV-0358448_13	UniRef90_T3DDR1	174.0	0	Phage major tail 2 family protein	N/A
eggNOG-mapper	UHGV-0358448_13	1151292.QEW_2426	174.0	0	N/A	N/A
structural_annotation	UHGV-0358448_13	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0358448_14	phrog_2595	79.7	3.5e-23	head-tail connector protein	connector
UniRef90	UHGV-0358448_14	UniRef90_UPI001D068DAC	137.0	5.02e-39	minor capsid protein	N/A
eggNOG-mapper	UHGV-0358448_14	742740.HMPREF9474_03510	125.0	4.28e-35	N/A	N/A
Pfam	UHGV-0358448_14	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0358448_14	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0358448_15	phrog_556	59.9	3.9e-17	minor head protein	head and packaging
eggNOG-mapper	UHGV-0358448_15	483218.BACPEC_01151	140.0	3.66005e-41	N/A	N/A
PHROG	UHGV-0358448_16	phrog_8710	126.3	1.1e-37	N/A	unknown function
eggNOG-mapper	UHGV-0358448_16	742740.HMPREF9474_03508	125.0	1e-35	N/A	N/A
structural_annotation	UHGV-0358448_16	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0358448_17	phrog_541	71.7	1e-20	head-tail adaptor	connector
eggNOG-mapper	UHGV-0358448_17	1304866.K413DRAFT_0783	149.0	9.80909e-45	N/A	N/A
PHROG	UHGV-0358448_18	phrog_422	266.3	0	major head protein	head and packaging
UniRef90	UHGV-0358448_18	UniRef90_A0A3D5M0U8	505.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0358448_18	663278.Ethha_1589	376.0	0	N/A	N/A
structural_annotation	UHGV-0358448_18	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0358448_19	phrog_2303	137.3	1.2e-40	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0358448_19	483218.BACPEC_01156	127.0	1.37e-33	N/A	N/A
PHROG	UHGV-0358448_21	phrog_581	249.1	0	minor head protein	head and packaging
UniRef90	UHGV-0358448_21	UniRef90_A0A413YU28	676.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0358448_21	33035.JPJF01000093_gene2255	446.0	0	N/A	N/A
Pfam	UHGV-0358448_21	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0358448_21	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0358448_21	PF06152,PF03496,NF041404	N/A	N/A	N/A	N/A
PHROG	UHGV-0358448_22	phrog_533	285.3	0	portal protein	head and packaging
UniRef90	UHGV-0358448_22	UniRef90_A0A413YU90	936.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0358448_22	33035.JPJF01000093_gene2257	543.0	0	N/A	N/A
structural_annotation	UHGV-0358448_22	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0358448_23	K06909	94.7	1.2e-27	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0358448_23	phrog_2	68.4	1.5e-19	terminase large subunit	head and packaging
UniRef90	UHGV-0358448_23	UniRef90_A0A413YU24	960.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0358448_23	1294142.CINTURNW_1023	516.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0358448_23	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0358448_23	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0358448_23	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0358448_24	K07474	152.5	4.2039e-45	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0358448_24	phrog_51	160.8	0	terminase small subunit	head and packaging
UniRef90	UHGV-0358448_24	UniRef90_A0A413YU49	367.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0358448_24	1499683.CCFF01000014_gene3916	150.0	2.4803e-43	Terminase small subunit	N/A
Pfam	UHGV-0358448_24	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0358448_24	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0358448_24	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0358448_25	phrog_36	63.7	3.8e-18	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0358448_25	397290.C810_01391	100.0	7.49e-25	N/A	N/A
structural_annotation	UHGV-0358448_25	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-0358448_26	phrog_874	168.1	0	N/A	unknown function
UniRef90	UHGV-0358448_26	UniRef90_A0A6N7W7Q7	211.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0358448_26	411468.CLOSCI_00298	190.0	0	N/A	N/A
structural_annotation	UHGV-0358448_26	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
PHROG	UHGV-0358448_27	phrog_20593	69.9	2.8e-20	N/A	unknown function
AcrCatalog	UHGV-0358448_27	cluster_27421	39.7	0.000000289	NA	N/A
KOfam	UHGV-0358448_29	K00558	228.2	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0358448_29	phrog_116	261.9	0	DNA methyltransferase	other
UniRef90	UHGV-0358448_29	UniRef90_A0A174GZ53	931.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0358448_29	1235800.C819_02255	718.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0358448_29	MTase_II_00020	113.8	5.9e-36	Type II methyltransferase	RM
Pfam	UHGV-0358448_29	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0358448_29	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0358448_29	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0358448_30	K07319	90.4	1.7e-26	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0358448_30	phrog_16	226.6	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0358448_30	UniRef90_A0A356C6C6	1497.0	0	DNA methylase N-4	N/A
eggNOG-mapper	UHGV-0358448_30	1298920.KI911353_gene2709	1392.0	0	DEAD-like helicases superfamily	N/A
Pfam	UHGV-0358448_30	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0358448_30	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0358448_30	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0358448_30	PF01555,PF16203,PF04851,MF_01821,MF_00472,NF041790,NF008572,COG0553,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0358448_32	phrog_7566	92.1	4e-27	N/A	unknown function
eggNOG-mapper	UHGV-0358448_32	1235800.C819_00511	98.2	1.71e-23	N/A	N/A
structural_annotation	UHGV-0358448_33	PF02179,NF011863	N/A	N/A	N/A	N/A
KOfam	UHGV-0358448_34	K03469	67.5	2.7e-19	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0358448_34	phrog_531	64.9	1.4e-18	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0358448_34	UniRef90_A0A413YU26	270.0	0	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0358448_34	941824.TCEL_01720	76.6	0.00000000000000123	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-0358448_34	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0358448_34	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0358448_34	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-0358448_35	phrog_3584	242.5	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0358448_35	UniRef90_A0A4P8IFK4	346.0	0	N/A	N/A
eggNOG-mapper	UHGV-0358448_35	742741.HMPREF9475_00404	297.0	0	N/A	N/A
structural_annotation	UHGV-0358448_35	PF21578	N/A	N/A	N/A	N/A
UniRef90	UHGV-0358448_37	UniRef90_A0A356C6A4	154.0	0	HTH_17 domain-containing protein	N/A
eggNOG-mapper	UHGV-0358448_37	318464.IO99_13850	65.5	0.000000000000379	Helix-turn-helix domain	N/A
Pfam	UHGV-0358448_37	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0358448_37	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-0358448_37	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0358448_44	NF037954	N/A	N/A	N/A	N/A
PHROG	UHGV-0358448_47	phrog_3	41.7	0.000000000047	transcriptional repressor	transcription regulation
UniRef90	UHGV-0358448_47	UniRef90_UPI00041C3C71	115.0	5.44e-32	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0358448_47	1120998.AUFC01000030_gene2205	96.7	1.45e-25	Helix-turn-helix	N/A
Pfam	UHGV-0358448_47	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0358448_47	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0358448_48	K22300	62.5	9.8e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0358448_48	phrog_8	66.4	6.5e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0358448_48	UniRef90_A0A3A9CUU7	150.0	3.36312e-44	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0358448_48	1120998.AUFC01000030_gene2204	117.0	1.6e-31	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0358448_48	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0358448_48	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0358448_48	PF13560,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0358448_49	phrog_87	77.8	1.2e-22	metallo-protease	other
UniRef90	UHGV-0358448_49	UniRef90_A0A3R6AQ03	204.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0358448_49	397288.C806_00132	196.0	0	Zn peptidase	N/A
Pfam	UHGV-0358448_49	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0358448_49	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0358448_49	PF06114,COG2856	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0358448_50	658655.HMPREF0988_00902	47.8	0.00000412	N/A	N/A
PHROG	UHGV-0358448_51	phrog_2695	385.9	0	N/A	unknown function
UniRef90	UHGV-0358448_51	UniRef90_A0A174PBX4	815.0	0	SIR2_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0358448_51	1504823.CCMM01000008_gene1082	528.0	0	NAD+ binding	N/A
PADLOC	UHGV-0358448_51	Sirtuin_Blast2	239.4	0	N/A	N/A
Pfam	UHGV-0358448_51	PF13289	N/A	N/A	SIR2-like domain	SIR2_2
COG	UHGV-0358448_51	COG0846	N/A	N/A	NAD-dependent protein deacetylase, SIR2 family	N/A
structural_annotation	UHGV-0358448_51	PF13289	N/A	N/A	N/A	N/A
KOfam	UHGV-0358448_52	K14059	229.7	0	int; integrase	N/A
PHROG	UHGV-0358448_52	phrog_1	210.3	0	integrase	integration and excision
UniRef90	UHGV-0358448_52	UniRef90_R6AKI6	815.0	0	Site-specific recombinase phage integrase family	N/A
eggNOG-mapper	UHGV-0358448_52	536233.CLO_0855	395.0	0	Arm DNA-binding domain	N/A
Pfam	UHGV-0358448_52	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0358448_52	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0358448_52	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0358448_52	PF00589,PF12286,PF14659,MF_01808,NF002331,COG4974	N/A	N/A	N/A	N/A