UHGV-0364049 (vOTU-085754)

Viral Genome: UHGV-0364049

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0364049
vOTU ID	vOTU-085754
Representative Genome?	Yes
Source	mMGE
Original Genome ID	SRR3993000_141_22244_round8-12~4063328
Associated Biosample	SAMN05414912
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	91.34 (High-quality)
Trimmed?	No
CheckV Viral Markers	7
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9819
Viral Hallmark Genes (geNomad)	4
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	15.85
Jumbo Phage?	No

Genome Content
Length (bps)	38,282
GC Content	59.18%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	55
CDS Density	94%
Average CDS Length (bps)	653.73
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 91.34)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0364049_2	phrog_937	52.7	0.0000000000000076	hemolysin	other
eggNOG-mapper	UHGV-0364049_2	1519439.JPJG01000023_gene533	75.1	2.28e-16	N/A	N/A
PHROG	UHGV-0364049_5	phrog_13256	61.9	6.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-0364049_5	428125.CLOLEP_01907	76.3	1.57e-17	N/A	N/A
KOfam	UHGV-0364049_6	K01447	125.6	4.8e-37	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0364049_6	phrog_1794	135.2	5.6e-40	amidase	lysis
UniRef90	UHGV-0364049_6	UniRef90_A0A3D4VSU2	185.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0364049_6	411470.RUMGNA_02087	166.0	0	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0364049_6	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0364049_6	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0364049_6	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
UniRef90	UHGV-0364049_7	UniRef90_A0A1C6JAI6	67.4	0.000000000000506	RNA polymerase sigma factor, sigma-70 family	N/A
structural_annotation	UHGV-0364049_7	PF16509,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0364049_8	K19167	118.7	6.5e-35	abiQ; protein AbiQ	N/A
PHROG	UHGV-0364049_8	phrog_9764	125.1	4.4e-37	N/A	unknown function
UniRef90	UHGV-0364049_8	UniRef90_A0A845R8D8	216.0	0	Type III toxin-antitoxin system ToxN/AbiQ family toxin	N/A
eggNOG-mapper	UHGV-0364049_8	1519439.JPJG01000060_gene1906	175.0	0	Toxin ToxN, type III toxin-antitoxin system	N/A
PADLOC	UHGV-0364049_8	AbiQ	149.9	2.24208e-44	AbiQ	Abi
Pfam	UHGV-0364049_8	PF13958	N/A	N/A	Toxin ToxN, type III toxin-antitoxin system	ToxN_toxin
structural_annotation	UHGV-0364049_8	PF13958	N/A	N/A	N/A	N/A
UniRef90	UHGV-0364049_11	UniRef90_A0A7M1RSZ3	80.5	7.73e-16	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0364049_11	1378168.N510_03079	64.7	0.000000000267	N/A	N/A
KOfam	UHGV-0364049_12	K14059	134.1	2e-39	int; integrase	N/A
PHROG	UHGV-0364049_12	phrog_1	141.4	7.49975e-42	integrase	integration and excision
UniRef90	UHGV-0364049_12	UniRef90_A0A2Z4QB94	296.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0364049_12	1410630.JNKP01000001_gene1832	90.5	1.67e-17	Phage integrase family	N/A
Pfam	UHGV-0364049_12	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0364049_12	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0364049_12	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
COG	UHGV-0364049_13	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0364049_13	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A
COG	UHGV-0364049_14	COG2374	N/A	N/A	Predicted extracellular nuclease	N/A
KOfam	UHGV-0364049_17	K22300	50.8	0.000000000000036	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0364049_17	phrog_8	42.1	0.000000000016	transcriptional regulator	transcription regulation
UniRef90	UHGV-0364049_17	UniRef90_A0A1Y4L0A2	108.0	7.21e-28	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0364049_17	748224.HMPREF9436_01444	104.0	6.72e-27	N/A	N/A
Pfam	UHGV-0364049_17	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0364049_17	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0364049_17	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0364049_19	phrog_1090	56.5	4.6e-16	N/A	unknown function
UniRef90	UHGV-0364049_19	UniRef90_A0A1S1YCV1	54.3	0.0000000966	CRISPR-associated protein Cas2	N/A
eggNOG-mapper	UHGV-0364049_19	1163617.SCD_n00252	48.9	0.00000208	N/A	N/A
structural_annotation	UHGV-0364049_24	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0364049_25	UniRef90_A0A2Z4GU98	178.0	0	Ribonuclease inhibitor	N/A
eggNOG-mapper	UHGV-0364049_25	563031.HMPREF0666_01114	81.3	0.00000000000000196	N/A	N/A
Pfam	UHGV-0364049_25	PF00560	N/A	N/A	Leucine Rich Repeat	LRR_1
structural_annotation	UHGV-0364049_27	PF05082	N/A	N/A	N/A	N/A
KOfam	UHGV-0364049_30	K00558	163.5	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0364049_30	phrog_363	244.4	0	DNA methyltransferase	other
UniRef90	UHGV-0364049_30	UniRef90_G4KRB8	344.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-0364049_30	693746.OBV_01900	344.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-0364049_30	MTase_II_00058	118.8	2.5e-35	Type II methyltransferase	RM
Pfam	UHGV-0364049_30	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0364049_30	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0364049_30	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0364049_30	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0364049_31	phrog_355	70.5	1.6e-20	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0364049_31	UniRef90_R5AT00	122.0	5.12e-33	Gp57	N/A
eggNOG-mapper	UHGV-0364049_31	573061.Clocel_3558	82.8	1.99e-18	N/A	N/A
Pfam	UHGV-0364049_31	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0364049_31	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
PHROG	UHGV-0364049_35	phrog_190	109.6	2.7e-32	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0364049_35	UniRef90_UPI0006C2AC63	131.0	3.79e-36	N/A	N/A
eggNOG-mapper	UHGV-0364049_35	693746.OBV_25250	120.0	8.16e-33	N/A	N/A
Pfam	UHGV-0364049_35	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0364049_35	PF06356	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0364049_37	PF20111,NF033202	N/A	N/A	N/A	N/A
PHROG	UHGV-0364049_38	phrog_3584	125.0	5.1e-37	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0364049_38	537013.CLOSTMETH_02141	77.8	0.00000000000000994	N/A	N/A
structural_annotation	UHGV-0364049_38	PF21578,MF_00360	N/A	N/A	N/A	N/A
UniRef90	UHGV-0364049_39	UniRef90_A0A3D2I6C5	58.9	0.000000000345	Conjugal transfer protein	N/A
eggNOG-mapper	UHGV-0364049_39	272563.CD630_05081	59.7	0.0000000000294	Cysteine-rich KTR	N/A
Pfam	UHGV-0364049_39	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
structural_annotation	UHGV-0364049_39	PF14205	N/A	N/A	N/A	N/A
KOfam	UHGV-0364049_41	K06909	134.5	9.3e-40	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0364049_41	phrog_2	121.7	9.6e-36	terminase large subunit	head and packaging
UniRef90	UHGV-0364049_41	UniRef90_A0A810Q5R0	613.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0364049_41	1410650.JHWL01000003_gene2834	567.0	0	N/A	N/A
Pfam	UHGV-0364049_41	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0364049_41	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0364049_41	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0364049_42	phrog_511	233.9	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0364049_42	1410650.JHWL01000003_gene2827	318.0	0	N/A	N/A
structural_annotation	UHGV-0364049_42	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0364049_43	phrog_156	300.3	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0364049_43	1410650.JHWL01000003_gene2833	533.0	0	N/A	N/A
structural_annotation	UHGV-0364049_43	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
PHROG	UHGV-0364049_44	phrog_13908	197.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0364049_44	1410650.JHWL01000003_gene2831	124.0	6.63e-31	N/A	N/A
PHROG	UHGV-0364049_45	phrog_1357	233.1	0	major head protein	head and packaging
UniRef90	UHGV-0364049_45	UniRef90_A0A2V2CFL5	402.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0364049_45	748224.HMPREF9436_02545	264.0	0	N/A	N/A
Pfam	UHGV-0364049_45	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0364049_45	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0364049_45	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0364049_46	phrog_15239	43.9	0.0000000000035	N/A	unknown function
PHROG	UHGV-0364049_47	phrog_12105	113.5	1.2e-33	N/A	unknown function
eggNOG-mapper	UHGV-0364049_47	1226322.HMPREF1545_03850	57.8	0.0000000121	N/A	N/A
eggNOG-mapper	UHGV-0364049_48	537007.BLAHAN_05255	68.9	0.00000000129	N/A	N/A
UniRef90	UHGV-0364049_50	UniRef90_R5DCX9	193.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0364049_50	1410650.JHWL01000003_gene2815	132.0	6.27e-32	N/A	N/A
eggNOG-mapper	UHGV-0364049_51	1408437.JNJN01000039_gene389	528.0	0	heme binding	N/A
COG	UHGV-0364049_51	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-0364049_52	PF01835,NF005176,COG5456	N/A	N/A	N/A	N/A
KOfam	UHGV-0364049_53	K16617	40.7	0.000000000013	COL13A; collagen type XIII alpha	N/A
eggNOG-mapper	UHGV-0364049_53	1519439.JPJG01000060_gene1892	54.3	0.00000571	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-0364049_53	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0364049_53	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
KOfam	UHGV-0364049_55	K16628	42.7	0.0000000000015	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0364049_55	phrog_1806	40.8	0.000000000022	collagen like minor tail	tail
Pfam	UHGV-0364049_55	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0364049_55	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A