UHGV-0371496 (vOTU-051240)

Viral Genome: UHGV-0371496

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0371496
vOTU ID	vOTU-051240
Representative Genome?	Yes
Source	mMGE
Original Genome ID	SRR10479827_141_6854_round347~50774
Associated Biosample	SAMD00011172
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	DTR
CheckV Completeness	100 (Complete)
Trimmed?	No
CheckV Viral Markers	6
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9708
Viral Hallmark Genes (geNomad)	5
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	27.81
Jumbo Phage?	No

Genome Content
Length (bps)	38,434
GC Content	60.50%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	38
CDS Density	93%
Average CDS Length (bps)	936.71
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 100)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0371496_1	K22300	61.4	2.1e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0371496_1	phrog_8	45.9	0.0000000000013	transcriptional regulator	transcription regulation
UniRef90	UHGV-0371496_1	UniRef90_A0A564U026	132.0	6.65e-39	HTH-type transcriptional regulator ImmR	N/A
eggNOG-mapper	UHGV-0371496_1	1123304.AQYA01000037_gene181	50.4	0.00000266	Peptidase S24-like	N/A
Pfam	UHGV-0371496_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0371496_1	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
structural_annotation	UHGV-0371496_1	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0371496_3	K22300	80.9	2.2e-23	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0371496_3	phrog_8	60.5	4.5e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0371496_3	UniRef90_A0A564TH61	236.0	0	HTH-type transcriptional regulator ImmR	N/A
eggNOG-mapper	UHGV-0371496_3	665956.HMPREF1032_04076	89.0	8.45e-20	Peptidase S24-like	N/A
Pfam	UHGV-0371496_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0371496_3	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0371496_3	PF13560,MF_02017,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0371496_4	UniRef90_A0A564THJ6	125.0	1.21e-36	Helix-turn-helix domain protein	N/A
eggNOG-mapper	UHGV-0371496_4	445972.ANACOL_00136	52.8	0.0000000252	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0371496_4	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0371496_4	PF13560,NF041677,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0371496_5	PF20385,NF040556	N/A	N/A	N/A	N/A
UniRef90	UHGV-0371496_6	UniRef90_A0A3E2U489	226.0	0	N/A	N/A
structural_annotation	UHGV-0371496_6	PF12957	N/A	N/A	N/A	N/A
UniRef90	UHGV-0371496_7	UniRef90_A0A3E2U472	192.0	0	DNA-binding protein	N/A
Pfam	UHGV-0371496_7	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0371496_7	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-0371496_7	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0371496_12	phrog_3584	143.3	1.60028e-42	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0371496_12	525255.HMPREF0077_0972	128.0	1.98e-32	N/A	N/A
structural_annotation	UHGV-0371496_12	PF21578,NF033538	N/A	N/A	N/A	N/A
UniRef90	UHGV-0371496_13	UniRef90_A0A844DP33	107.0	2.11e-28	SqdX protein	N/A
Pfam	UHGV-0371496_13	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0371496_13	PF06530,MF_00674,TIGR01637,COG1342	N/A	N/A	N/A	N/A
UniRef90	UHGV-0371496_14	UniRef90_UPI00195E9406	87.0	2.38e-17	transposase	N/A
Pfam	UHGV-0371496_14	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
KOfam	UHGV-0371496_15	K06909	99.1	5.2e-29	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0371496_15	phrog_979	203.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0371496_15	UniRef90_A0A329UJ95	904.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0371496_15	748224.HMPREF9436_01395	839.0	0	Terminase-like family	N/A
Pfam	UHGV-0371496_15	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0371496_15	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0371496_15	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0371496_16	phrog_156	310.2	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0371496_16	748224.HMPREF9436_01396	862.0	0	N/A	N/A
structural_annotation	UHGV-0371496_16	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-0371496_17	K07584	53.3	0.0000000000000032	N/A	N/A
PHROG	UHGV-0371496_17	phrog_13908	173.7	0	N/A	unknown function
UniRef90	UHGV-0371496_17	UniRef90_A0A174CZ20	276.0	0	Predicted ribosomal protein	N/A
eggNOG-mapper	UHGV-0371496_17	748224.HMPREF9436_01398	231.0	0	Cysteine protease Prp	N/A
Pfam	UHGV-0371496_17	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0371496_17	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0371496_17	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0371496_18	phrog_1357	279.6	0	major head protein	head and packaging
UniRef90	UHGV-0371496_18	UniRef90_A0A844DTU7	478.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0371496_18	748224.HMPREF9436_01399	468.0	0	N/A	N/A
Pfam	UHGV-0371496_18	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0371496_18	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0371496_18	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0371496_19	phrog_15239	93.7	1.1e-27	N/A	unknown function
PHROG	UHGV-0371496_20	phrog_12105	67.3	2.7e-19	N/A	unknown function
PHROG	UHGV-0371496_21	phrog_511	185.7	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0371496_21	748224.HMPREF9436_01402	700.0	0	N/A	N/A
structural_annotation	UHGV-0371496_21	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
UniRef90	UHGV-0371496_22	UniRef90_A0A329TFM2	75.5	7.66e-17	Rho-GAP domain-containing protein	N/A
eggNOG-mapper	UHGV-0371496_23	748224.HMPREF9436_01404	101.0	4.2e-24	lysozyme activity	N/A
COG	UHGV-0371496_23	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
eggNOG-mapper	UHGV-0371496_24	718252.FP2_04890	306.0	0	hydrolase, family 25	N/A
COG	UHGV-0371496_24	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0371496_24	MF_02066	N/A	N/A	N/A	N/A
PHROG	UHGV-0371496_25	phrog_22978	124.0	8.1e-39	N/A	unknown function
UniRef90	UHGV-0371496_25	UniRef90_E2ZIB5	2505.0	0	Putative septum site-determining protein MinC	N/A
eggNOG-mapper	UHGV-0371496_25	748224.HMPREF9436_01406	2505.0	0	N/A	N/A
PHROG	UHGV-0371496_26	phrog_215	72.1	6.1e-23	structural protein with Ig domain	head and packaging
eggNOG-mapper	UHGV-0371496_26	748224.HMPREF9436_01407	114.0	8.7e-24	COG NOG18825 non supervised orthologous group	N/A
Pfam	UHGV-0371496_26	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
Pfam	UHGV-0371496_26	PF19789	N/A	N/A	N/A	DUF6273
PHROG	UHGV-0371496_28	phrog_27381	63.1	2.5e-18	tail fiber protein	tail
eggNOG-mapper	UHGV-0371496_28	411483.FAEPRAA2165_00757	145.0	2.18e-37	N/A	N/A
eggNOG-mapper	UHGV-0371496_29	411470.RUMGNA_02068	85.1	1.07e-17	N/A	N/A
PHROG	UHGV-0371496_30	phrog_23587	107.4	1.1e-31	N/A	unknown function
eggNOG-mapper	UHGV-0371496_30	748224.HMPREF9436_01176	55.8	0.0000000428	N/A	N/A
eggNOG-mapper	UHGV-0371496_31	657322.FPR_21920	67.0	0.00000000023	N/A	N/A
COG	UHGV-0371496_31	COG5563	N/A	N/A	N/A	N/A
PHROG	UHGV-0371496_32	phrog_19111	102.3	4.5e-40	N/A	unknown function
eggNOG-mapper	UHGV-0371496_32	1297617.JPJD01000034_gene670	78.2	0.000000000000459	N/A	N/A
structural_annotation	UHGV-0371496_32	PF16756,MF_01195,TIGR03548,COG3055	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0371496_33	1297617.JPJD01000034_gene669	85.5	7.22e-20	N/A	N/A
UniRef90	UHGV-0371496_34	UniRef90_A0A3E2TZP0	99.8	9.84e-27	XkdX family protein	N/A
Pfam	UHGV-0371496_34	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
KOfam	UHGV-0371496_35	K08640	91.6	1.5e-26	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0371496_35	phrog_894	104.1	1.6e-30	endolysin	lysis
UniRef90	UHGV-0371496_35	UniRef90_A0A3E2U540	273.0	0	N/A	N/A
eggNOG-mapper	UHGV-0371496_35	718252.FP2_05470	248.0	0	Peptidase M15A	N/A
Pfam	UHGV-0371496_35	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0371496_35	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0371496_35	PF05951,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0371496_36	phrog_199	91.4	9.3e-27	holin	lysis
UniRef90	UHGV-0371496_36	UniRef90_A0A3E2U4Z7	268.0	0	Holin	N/A
eggNOG-mapper	UHGV-0371496_36	742740.HMPREF9474_02333	188.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0371496_36	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0371496_36	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0371496_36	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0371496_36	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0371496_37	phrog_263	86.7	1.7e-25	holin	lysis
UniRef90	UHGV-0371496_37	UniRef90_A0A3E2U4Y4	158.0	0	Phage holin	N/A
eggNOG-mapper	UHGV-0371496_37	718252.FP2_06470	102.0	2.11e-27	SPP1 phage holin	N/A
Pfam	UHGV-0371496_37	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-0371496_37	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0371496_37	PF04688,TIGR01592	N/A	N/A	N/A	N/A
KOfam	UHGV-0371496_38	K14059	199.3	0	int; integrase	N/A
PHROG	UHGV-0371496_38	phrog_1	188.1	0	integrase	integration and excision
UniRef90	UHGV-0371496_38	UniRef90_A0A3E2U452	769.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0371496_38	748224.HMPREF9436_01375	580.0	0	Phage integrase family	N/A
Pfam	UHGV-0371496_38	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-0371496_38	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0371496_38	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0371496_38	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A