UHGV-0384937 (vOTU-031434)

Viral Genome: UHGV-0384937

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0384937
vOTU ID	vOTU-031434
Representative Genome?	Yes
Source	COPSAC
Original Genome ID	OTU_4273
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	73.6 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	18
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9805
Viral Hallmark Genes (geNomad)	8
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	33.83
Jumbo Phage?	No

Genome Content
Length (bps)	27,694
GC Content	42.26%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	43
CDS Density	91%
Average CDS Length (bps)	586.88
Total tRNA Genes	2
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 73.6)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0384937_2	phrog_14970	255.3	0	N/A	unknown function
UniRef90	UHGV-0384937_2	UniRef90_UPI00123F00F5	201.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-0384937_2	642492.Clole_0944	189.0	0	double-strand break repair protein	N/A
COG	UHGV-0384937_2	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0384937_2	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0384937_3	phrog_72	53.9	0.000000000000002	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0384937_3	411490.ANACAC_00804	339.0	0	N/A	N/A
structural_annotation	UHGV-0384937_3	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0384937_4	phrog_7566	88.9	3.5e-26	N/A	unknown function
UniRef90	UHGV-0384937_4	UniRef90_UPI0015935946	83.2	6.58e-19	phosphoenolpyruvate carboxykinase	N/A
eggNOG-mapper	UHGV-0384937_4	508419.F8J187_9CAUD	92.8	1.75e-23	N/A	N/A
PHROG	UHGV-0384937_5	phrog_244	68.9	9.3e-20	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0384937_5	411490.ANACAC_00802	190.0	0	N/A	N/A
structural_annotation	UHGV-0384937_5	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0384937_6	phrog_15768	107.0	2.1e-31	N/A	unknown function
UniRef90	UHGV-0384937_6	UniRef90_UPI001C1E0E19	163.0	0	GntR family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0384937_6	886379.AEWI01000001_gene1766	145.0	1.49e-40	N/A	N/A
structural_annotation	UHGV-0384937_6	PF10771,MF_01177,TIGR01714,COG5529	N/A	N/A	N/A	N/A
PHROG	UHGV-0384937_7	phrog_1123	60.7	1.8e-17	N/A	unknown function
UniRef90	UHGV-0384937_7	UniRef90_A0A6N9P096	52.8	0.00000113	DNA gyrase	N/A
eggNOG-mapper	UHGV-0384937_7	1560313.A0A0D3MSU0_9CAUD	56.6	0.00000000621	N/A	N/A
structural_annotation	UHGV-0384937_7	PF03551,MF_01804,TIGR03433,COG1695	N/A	N/A	N/A	N/A
UniRef90	UHGV-0384937_8	UniRef90_UPI00164B3846	124.0	4.61e-36	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0384937_8	1280692.AUJL01000020_gene1784	50.1	0.000000299	PFAM transposase IS3 IS911 family protein	N/A
Pfam	UHGV-0384937_8	PF13518	N/A	N/A	Helix-turn-helix domain	HTH_28
COG	UHGV-0384937_8	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
PHROG	UHGV-0384937_9	phrog_16126	79.4	3.8e-23	N/A	unknown function
PHROG	UHGV-0384937_10	phrog_15198	42.6	0.0000000000098	N/A	unknown function
UniRef90	UHGV-0384937_10	UniRef90_A0A3E2WEW4	76.3	0.00000000000000118	N/A	N/A
eggNOG-mapper	UHGV-0384937_10	1232453.BAIF02000057_gene1153	68.6	0.00000000000127	N/A	N/A
Pfam	UHGV-0384937_10	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0384937_11	phrog_20730	129.5	8.6e-39	N/A	unknown function
eggNOG-mapper	UHGV-0384937_11	1235792.C808_03071	103.0	3.5e-28	N/A	N/A
PHROG	UHGV-0384937_12	phrog_2776	71.9	4.6e-21	N/A	unknown function
UniRef90	UHGV-0384937_12	UniRef90_A0A5S4VR73	241.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0384937_12	411490.ANACAC_00794	296.0	0	N/A	N/A
structural_annotation	UHGV-0384937_12	PF06319,NF033832,COG5321	N/A	N/A	N/A	N/A
PHROG	UHGV-0384937_14	phrog_10867	69.9	2.6e-20	N/A	unknown function
eggNOG-mapper	UHGV-0384937_14	1235793.C809_02205	124.0	3.23e-35	N/A	N/A
UniRef90	UHGV-0384937_16	UniRef90_A0A414AP24	67.4	0.000000000000103	Ribbon-helix-helix protein, CopG family	N/A
Pfam	UHGV-0384937_16	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-0384937_16	PF01402,NF041793,COG4710	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-0384937_17	cluster_2172	32.3	0.000189	NA	N/A
PHROG	UHGV-0384937_18	phrog_1974	132.2	3.5e-39	N/A	unknown function
UniRef90	UHGV-0384937_18	UniRef90_UPI00164B83C5	588.0	0	nucleoid-associated protein	N/A
eggNOG-mapper	UHGV-0384937_18	411490.ANACAC_00791	642.0	0	37-kD nucleoid-associated bacterial protein	N/A
Pfam	UHGV-0384937_18	PF04245	N/A	N/A	37-kD nucleoid-associated bacterial protein	NA37
COG	UHGV-0384937_18	COG3081	N/A	N/A	dsDNA-binding nucleoid-associated protein YejK/NdpA	N/A
structural_annotation	UHGV-0384937_18	PF04245,MF_00730,NF001557,COG3081	N/A	N/A	N/A	N/A
PHROG	UHGV-0384937_20	phrog_36	68.5	1.1e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0384937_20	UniRef90_UPI0011CB7084	254.0	0	sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0384937_20	1232447.BAHW02000005_gene152	139.0	1.64e-40	N/A	N/A
structural_annotation	UHGV-0384937_20	PF07374,MF_00674,NF001074	N/A	N/A	N/A	N/A
PHROG	UHGV-0384937_21	phrog_1281	121.6	4.1e-36	N/A	unknown function
UniRef90	UHGV-0384937_21	UniRef90_A0A374AHH0	314.0	0	N/A	N/A
eggNOG-mapper	UHGV-0384937_21	61647.LG71_03530	179.0	0	Phage-associated protein	N/A
Pfam	UHGV-0384937_21	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-0384937_21	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0384937_21	PF13274,COG3600	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0384937_22	66897.DJ64_11545	72.8	0.0000000000000413	N/A	N/A
KOfam	UHGV-0384937_23	K06909	430.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0384937_23	phrog_3717	149.1	1.96182e-44	terminase large subunit	head and packaging
UniRef90	UHGV-0384937_23	UniRef90_A0A374ADY0	1001.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0384937_23	411461.DORFOR_01162	691.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0384937_23	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0384937_23	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0384937_23	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0384937_23	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0384937_23	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0384937_24	phrog_533	294.7	0	portal protein	head and packaging
UniRef90	UHGV-0384937_24	UniRef90_A0A374AG13	880.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0384937_24	1304866.K413DRAFT_3035	461.0	0	N/A	N/A
structural_annotation	UHGV-0384937_24	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0384937_25	phrog_581	267.4	0	minor head protein	head and packaging
UniRef90	UHGV-0384937_25	UniRef90_A0A374AGA4	1011.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0384937_25	1235799.C818_04219	522.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0384937_25	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0384937_25	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0384937_25	PF06152	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0384937_26	1304866.K413DRAFT_0808	50.1	0.000000429	N/A	N/A
PHROG	UHGV-0384937_27	phrog_194	88.2	9.4e-26	head scaffolding protein	head and packaging
UniRef90	UHGV-0384937_27	UniRef90_A0A173RCF7	175.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0384937_27	411461.DORFOR_01166	174.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0384937_27	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0384937_28	phrog_422	222.9	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0384937_28	693746.OBV_18090	345.0	0	N/A	N/A
structural_annotation	UHGV-0384937_28	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0384937_29	phrog_541	66.2	4.7e-19	head-tail adaptor	connector
eggNOG-mapper	UHGV-0384937_29	1235799.C818_04224	65.1	0.00000000000718	N/A	N/A
PHROG	UHGV-0384937_30	phrog_3366	102.8	2.6e-30	N/A	unknown function
eggNOG-mapper	UHGV-0384937_30	411470.RUMGNA_02221	66.6	0.00000000000178	N/A	N/A
Pfam	UHGV-0384937_30	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0384937_30	PF20536,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0384937_31	phrog_556	141.2	2.40042e-42	minor head protein	head and packaging
UniRef90	UHGV-0384937_31	UniRef90_UPI0001F0190C	243.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0384937_31	411462.DORLON_00783	152.0	1.4013e-45	N/A	N/A
Pfam	UHGV-0384937_31	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0384937_31	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0384937_32	phrog_3266	137.8	3.59994e-41	tail completion	connector
UniRef90	UHGV-0384937_32	UniRef90_UPI0018994F5C	115.0	1.62e-30	chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0384937_32	411470.RUMGNA_02223	158.0	0	N/A	N/A
structural_annotation	UHGV-0384937_32	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0384937_33	phrog_3099	125.3	3.9e-37	N/A	unknown function
eggNOG-mapper	UHGV-0384937_33	658655.HMPREF0988_02555	133.0	2.63e-37	N/A	N/A
structural_annotation	UHGV-0384937_33	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0384937_34	phrog_4450	104.9	6.2e-31	N/A	unknown function
UniRef90	UHGV-0384937_34	UniRef90_UPI0018CF6A9D	58.5	0.0000000193	AP endonuclease	N/A
eggNOG-mapper	UHGV-0384937_34	658655.HMPREF0988_02554	72.8	0.0000000000000106	N/A	N/A
Pfam	UHGV-0384937_34	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-0384937_34	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0384937_35	phrog_706	159.7	0	N/A	unknown function
UniRef90	UHGV-0384937_35	UniRef90_A0A174K5P2	268.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0384937_35	411468.CLOSCI_02406	163.0	0	COG NOG24969 non supervised orthologous group	N/A
Pfam	UHGV-0384937_35	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0384937_35	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0384937_36	phrog_6900	251.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0384937_36	UniRef90_A0A4P8IEY8	1154.0	0	Phage minor tail protein	N/A
eggNOG-mapper	UHGV-0384937_36	658655.HMPREF0988_02552	347.0	0	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-0384937_36	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0384937_37	phrog_33	54.1	0.0000000000000025	distal tail protein Dit	tail
UniRef90	UHGV-0384937_37	UniRef90_A0A374AGE2	462.0	0	MtfA protein	N/A
eggNOG-mapper	UHGV-0384937_37	411490.ANACAC_00709	236.0	0	phage tail	N/A
COG	UHGV-0384937_37	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0384937_37	PF05709,PF11699,TIGR01633,NF009806,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0384937_38	phrog_3558	379.2	0	tail protein	tail
UniRef90	UHGV-0384937_38	UniRef90_UPI0001F01913	996.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0384937_38	411490.ANACAC_00708	384.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0384937_38	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0384937_38	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0384937_38	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0384937_38	PF06605,PF21683,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0384937_39	phrog_24267	136.3	2.1e-40	N/A	unknown function
UniRef90	UHGV-0384937_39	UniRef90_A0A173T301	87.8	3.9e-17	Phage-related holin (Lysis protein)	N/A
eggNOG-mapper	UHGV-0384937_39	764299.STRIC_1424	127.0	3.32e-33	tail collar domain protein	N/A
COG	UHGV-0384937_39	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-0384937_40	phrog_2566	64.5	1.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-0384937_40	702450.CUW_0544	55.1	0.00000000624	N/A	N/A
PHROG	UHGV-0384937_41	phrog_937	48.1	0.00000000000022	hemolysin	other
eggNOG-mapper	UHGV-0384937_41	1298920.KI911353_gene2670	54.3	0.0000000468	N/A	N/A
PHROG	UHGV-0384937_42	phrog_443	57.5	3.9e-16	holin	lysis
UniRef90	UHGV-0384937_42	UniRef90_A0A1I0HNR6	88.6	8.1e-22	Holin, r1t family	N/A
eggNOG-mapper	UHGV-0384937_42	397290.C810_03257	89.0	1.04e-22	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0384937_42	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0384937_42	PF16945	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0384937_43	411490.ANACAC_00703	96.3	4.39e-24	Ami_2	N/A
COG	UHGV-0384937_43	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A