UHGV-0387219 (vOTU-153968)

Viral Genome: UHGV-0387219

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0387219
vOTU ID	vOTU-153968
Representative Genome?	Yes
Source	COPSAC
Original Genome ID	OTU_4648
Associated Biosample	N/A
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	62.11 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	10
CheckV Host Markers	1
Recoded?	No

Viral Content
geNomad score	0.9815
Viral Hallmark Genes (geNomad)	8
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	34.52
Jumbo Phage?	No

Genome Content
Length (bps)	25,016
GC Content	54.57%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	45
CDS Density	95%
Average CDS Length (bps)	530.07
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 62.11)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0387219_1	phrog_2562	99.1	5.5e-29	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0387219_1	UniRef90_A0A1C6D5S6	266.0	0	N/A	N/A
eggNOG-mapper	UHGV-0387219_1	1235790.C805_00030	174.0	0	N/A	N/A
Pfam	UHGV-0387219_1	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0387219_1	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0387219_2	PF11417	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0387219_4	552398.HMPREF0866_03131	60.5	0.0000000000185	N/A	N/A
PHROG	UHGV-0387219_6	phrog_3777	57.4	1.4e-16	N/A	unknown function
UniRef90	UHGV-0387219_6	UniRef90_UPI0019572B07	128.0	2.44e-36	N/A	N/A
eggNOG-mapper	UHGV-0387219_6	994573.T472_0204795	72.0	0.0000000000000108	N/A	N/A
Pfam	UHGV-0387219_6	PF12957	N/A	N/A	N/A	DUF3846
COG	UHGV-0387219_6	COG4734	N/A	N/A	Antirestriction protein ArdA	N/A
PHROG	UHGV-0387219_7	phrog_7704	44.2	0.0000000000032	N/A	unknown function
UniRef90	UHGV-0387219_7	UniRef90_UPI0019214AF7	85.1	1.46e-19	N/A	N/A
Pfam	UHGV-0387219_7	PF04448	N/A	N/A	N/A	DUF551
COG	UHGV-0387219_7	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0387219_7	PF04448	N/A	N/A	N/A	N/A
PHROG	UHGV-0387219_9	phrog_38832	73.2	2.3e-21	N/A	unknown function
eggNOG-mapper	UHGV-0387219_9	445972.ANACOL_00165	73.2	0.0000000000000887	N/A	N/A
structural_annotation	UHGV-0387219_9	PF11717,TIGR02450	N/A	N/A	N/A	N/A
Pfam	UHGV-0387219_11	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-0387219_13	PF19070	N/A	N/A	N/A	N/A
PHROG	UHGV-0387219_14	phrog_2245	50.7	0.000000000000033	nucleoside triphosphate pyrophosphohydrolase	other
structural_annotation	UHGV-0387219_14	NF001611,COG1694	N/A	N/A	N/A	N/A
COG	UHGV-0387219_15	COG1327	N/A	N/A	Transcriptional regulator NrdR, contains Zn-ribbon and ATP-cone domains	N/A
PHROG	UHGV-0387219_16	phrog_2657	184.6	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-0387219_16	UniRef90_A0A374AXT0	317.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0387219_16	411490.ANACAC_00702	285.0	0	phage regulatory protein, rha family	N/A
Pfam	UHGV-0387219_16	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-0387219_16	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0387219_16	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
UniRef90	UHGV-0387219_17	UniRef90_U2R3C0	218.0	0	Nascent polypeptide-associated complex domain protein	N/A
eggNOG-mapper	UHGV-0387219_17	1226322.HMPREF1545_00042	218.0	0	N/A	N/A
structural_annotation	UHGV-0387219_17	PF13542	N/A	N/A	N/A	N/A
KOfam	UHGV-0387219_18	K00571	195.0	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0387219_18	phrog_498	112.9	3.1e-33	DNA methyltransferase	other
UniRef90	UHGV-0387219_18	UniRef90_A0A431IA37	286.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0387219_18	479437.Elen_2607	164.0	0	DNA methylase	N/A
PADLOC	UHGV-0387219_18	MTase_II_00157	143.8	4.2039e-45	Type II methyltransferase	RM
Pfam	UHGV-0387219_18	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0387219_18	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0387219_18	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-0387219_19	K06909	118.7	6e-35	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0387219_19	phrog_10250	166.6	0	N/A	unknown function
UniRef90	UHGV-0387219_19	UniRef90_A0A3D3Y0N9	677.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0387219_19	1226322.HMPREF1545_00043	609.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0387219_19	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0387219_19	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0387219_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0387219_19	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0387219_20	phrog_64	156.0	0	portal protein	head and packaging
UniRef90	UHGV-0387219_20	UniRef90_A0A856HZB4	663.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0387219_20	1256908.HMPREF0373_00485	96.7	1.26e-18	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0387219_20	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0387219_20	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0387219_21	phrog_2468	101.9	5e-30	head morphogenesis	head and packaging
UniRef90	UHGV-0387219_21	UniRef90_A0A810PSD3	466.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0387219_21	1504822.CCNO01000013_gene286	189.0	0	cell adhesion	N/A
Pfam	UHGV-0387219_21	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
Pfam	UHGV-0387219_21	PF15542	N/A	N/A	Bacterial toxin 50	Ntox50
COG	UHGV-0387219_21	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0387219_21	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0387219_22	phrog_1865	41.7	0.000000000016	N/A	unknown function
structural_annotation	UHGV-0387219_22	PF07073,MF_00436,NF037951,COG4568	N/A	N/A	N/A	N/A
PHROG	UHGV-0387219_23	phrog_5	81.4	1.4e-23	tail completion or Neck1 protein	connector
UniRef90	UHGV-0387219_23	UniRef90_A0A3A9EIF3	192.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0387219_23	1504822.CCNO01000013_gene284	102.0	2.56e-26	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0387219_23	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0387219_23	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0387219_23	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0387219_27	PF03869,NF010256	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0387219_28	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0387219_29	phrog_544	195.5	0	major head protein	head and packaging
UniRef90	UHGV-0387219_29	UniRef90_A0A810PZM2	426.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0387219_29	1347392.CCEZ01000005_gene1236	283.0	0	N/A	N/A
structural_annotation	UHGV-0387219_29	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0387219_31	phrog_17977	72.1	5.4e-21	N/A	unknown function
UniRef90	UHGV-0387219_31	UniRef90_UPI00141211AB	97.4	6.71e-24	head-tail adaptor protein	N/A
structural_annotation	UHGV-0387219_31	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0387219_32	phrog_17405	46.0	0.00000000000076	head protein	head and packaging
UniRef90	UHGV-0387219_32	UniRef90_A0A415JI88	108.0	5.81e-28	N/A	N/A
structural_annotation	UHGV-0387219_32	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0387219_33	phrog_885	101.8	5.1e-30	major tail protein	tail
UniRef90	UHGV-0387219_33	UniRef90_A0A843J9F0	157.0	1.82169e-44	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0387219_33	1111121.HMPREF1247_0789	176.0	0	N/A	N/A
structural_annotation	UHGV-0387219_33	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0387219_34	UniRef90_A0A285PXU7	79.0	3.03e-16	Consensus disorder prediction	N/A
PHROG	UHGV-0387219_36	phrog_9959	206.7	0	tail length tape measure protein	tail
UniRef90	UHGV-0387219_36	UniRef90_A0A316M686	286.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0387219_36	936375.HMPREF1152_1084	249.0	0	tape measure	N/A
Pfam	UHGV-0387219_36	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0387219_36	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0387219_36	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
eggNOG-mapper	UHGV-0387219_37	1235797.C816_02660	72.8	0.0000000000000112	N/A	N/A
structural_annotation	UHGV-0387219_37	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0387219_38	phrog_13879	450.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0387219_38	1235797.C816_02659	726.0	0	N/A	N/A
structural_annotation	UHGV-0387219_38	PF14594,PF06588,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0387219_39	PF00354	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0387219_40	552398.HMPREF0866_02181	57.4	0.00000024	N/A	N/A
UniRef90	UHGV-0387219_42	UniRef90_A0A1Y4UUC3	53.1	0.0000000227	XkdX family protein	N/A
structural_annotation	UHGV-0387219_42	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-0387219_43	phrog_37604	188.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0387219_43	1232443.BAIA02000078_gene10	128.0	1e-35	N/A	N/A
PHROG	UHGV-0387219_44	phrog_1129	63.7	2.1e-18	holin	lysis
UniRef90	UHGV-0387219_44	UniRef90_UPI001D084907	122.0	1.95e-34	phage holin family protein	N/A
eggNOG-mapper	UHGV-0387219_44	1007096.BAGW01000036_gene2663	109.0	3.7e-30	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0387219_44	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0387219_44	PF06946	N/A	N/A	N/A	N/A