UHGV-0403398 (vOTU-097401)

Viral Genome: UHGV-0403398

Genome Information

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Overview
UHGV ID	UHGV-0403398
vOTU ID	vOTU-097401
Representative Genome?	Yes
Source	HuVirDB
Original Genome ID	ERS698776\|NODE_25_length_14399_cov_17.001952
Associated Biosample	SAMEA3323742
Viral Genome Confidence	Confident

Quality Assessment
CheckV Method	AAI-based
CheckV Completeness	73.87 (Medium-quality)
Trimmed?	No
CheckV Viral Markers	7
CheckV Host Markers	0
Recoded?	No

Viral Content
geNomad score	0.9765
Viral Hallmark Genes (geNomad)	4
Plasmid Hallmark Genes (geNomad)	0
ViralVerify Prediction	Virus
ViralVerify Score	29.12
Jumbo Phage?	No

Genome Content
Length (bps)	14,399
GC Content	38.25%
Genetic Code	The Standard Bacterial, Archaeal and Plant Plastid Code (11)
CDS Genes	20
CDS Density	95%
Average CDS Length (bps)	682.05
Total tRNA Genes	0
Suppressor tRNA Genes	0

Genome Content

Select to view: Genome Viewer Functional Annotation

Genome View (Completeness: 73.87)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0403398_3	PF17548	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0403398_4	PF17427	N/A	N/A	N/A	N/A
UniRef90	UHGV-0403398_5	UniRef90_A0A345MZF5	64.7	0.00000000597	DNA polymerase	N/A
KOfam	UHGV-0403398_6	K21237	188.1	0	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	N/A
PHROG	UHGV-0403398_6	phrog_1907	153.1	1.4013e-45	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0403398_6	UniRef90_A0A843H7Y9	133.0	4.61e-35	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-0403398_6	10756.DPOL_BPPH2	132.0	3.18e-33	DNA polymerase type B, organellar and viral	N/A
Pfam	UHGV-0403398_6	PF03175	N/A	N/A	DNA polymerase type B, organellar and viral	DNA_pol_B_2
KOfam	UHGV-0403398_7	K21237	272.6	0	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	N/A
PHROG	UHGV-0403398_7	phrog_1907	266.4	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0403398_7	UniRef90_A0A843HUC7	427.0	0	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-0403398_7	10756.DPOL_BPPH2	212.0	0	DNA polymerase type B, organellar and viral	N/A
Pfam	UHGV-0403398_7	PF03175	N/A	N/A	DNA polymerase type B, organellar and viral	DNA_pol_B_2
PHROG	UHGV-0403398_11	phrog_2150	182.8	0	terminase	head and packaging
UniRef90	UHGV-0403398_11	UniRef90_A0A843HJH1	456.0	0	Phage DNA encapsidation protein	N/A
eggNOG-mapper	UHGV-0403398_11	10756.PKG16_BPPH2	80.5	0.0000000000000369	Podovirus DNA encapsidation protein (Gp16)	N/A
Pfam	UHGV-0403398_11	PF05894	N/A	N/A	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
structural_annotation	UHGV-0403398_11	PF05894,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0403398_13	K07273	181.8	0	acm; lysozyme	N/A
PHROG	UHGV-0403398_13	phrog_291	145.9	3.09687e-43	endolysin	lysis
UniRef90	UHGV-0403398_13	UniRef90_UPI0018ABEB17	198.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0403398_13	411460.RUMTOR_02294	197.0	0	Lysin motif	N/A
Pfam	UHGV-0403398_13	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0403398_13	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0403398_13	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0403398_15	phrog_2006	301.0	0	major head protein	head and packaging
UniRef90	UHGV-0403398_15	UniRef90_A0A843HQR2	295.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0403398_15	10756.CAPSD_BPPH2	248.0	0	viral capsid	N/A
Pfam	UHGV-0403398_15	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
structural_annotation	UHGV-0403398_15	PF19821,PF02368,MF_04119,NF033394,COG1659	N/A	N/A	N/A	N/A
PHROG	UHGV-0403398_16	phrog_2248	269.0	0	tail protein	tail
UniRef90	UHGV-0403398_16	UniRef90_A0A843GL83	321.0	0	Caud_tail_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0403398_16	10756.DIT9_BPPH2	177.0	2.38221e-44	N/A	N/A
Pfam	UHGV-0403398_16	PF16838	N/A	N/A	Caudoviral major tail protein N-terminus	Caud_tail_N
Pfam	UHGV-0403398_16	PF20934	N/A	N/A	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
PHROG	UHGV-0403398_17	phrog_2038	218.3	0	upper collar connector	connector
UniRef90	UHGV-0403398_17	UniRef90_A0A345MZG5	201.0	0	Upper collar protein	N/A
eggNOG-mapper	UHGV-0403398_17	10753.B7SSN1_BPNF	189.0	0	Phage Connector (GP10)	N/A
Pfam	UHGV-0403398_17	PF05352	N/A	N/A	Phage Connector (GP10)	Phage_connector
structural_annotation	UHGV-0403398_17	PF05352,TIGR01538,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0403398_18	phrog_3225	150.7	8.40779e-45	adaptor Ad4	connector
UniRef90	UHGV-0403398_18	UniRef90_Q9FZW4	87.0	7.24e-17	Lower collar protein	N/A
eggNOG-mapper	UHGV-0403398_18	10756.TUB11_BPPH2	73.6	0.00000000000106	N/A	N/A